5_ureB_sRNA 
Superfamily of 5_ureB_sRNA 
complex unclassified

structured_complex

1 

Aar 
Superfamily of Aar 
complex unclassified

structured_complex

1 

AbsR11 
Superfamily of AbsR11 
complex unclassified

structured_complex

1 

AbsR28 
Superfamily of AbsR28 
complex unclassified

structured_complex

1 

Afu_309 
Superfamily of Afu_309 
complex unclassified

structured_complex

1 

Alfamo_CPB 
Superfamily of Alfamo_CPB 
complex unclassified

structured_complex

1 

Alpha_RBS 
Superfamily of Alpha_RBS 
complex unclassified

structured_complex

1 

ApoB_5_CRE 
Superfamily of ApoB_5_CRE 
complex unclassified

structured_complex

1 

ar9 
Superfamily of ar9 
complex unclassified

structured_complex

1 

asd 
Superfamily of asd 
complex unclassified

structured_complex

1 

AsrC 
Superfamily of AsrC 
complex unclassified

structured_complex

1 

Atu_At1 
Superfamily of Atu_At1 
complex unclassified

structured_complex

1 

Atu_C3 
Superfamily of Atu_C3 
complex unclassified

structured_complex

1 

Atu_L1 
Superfamily of Atu_L1 
complex unclassified

structured_complex

1 

BASRCI153 
Superfamily of BASRCI153 
complex unclassified

structured_complex

1 

BASRCI337 
Superfamily of BASRCI337 
complex unclassified

structured_complex

1 

BASRCI408 
Superfamily of BASRCI408 
complex unclassified

structured_complex

1 

BASRCI414 
Superfamily of BASRCI414 
complex unclassified

structured_complex

1 

BASRCII26 
Superfamily of BASRCII26 
complex unclassified

structured_complex

1 

bicoid_3 
Superfamily of bicoid_3 
complex unclassified

structured_complex

1 

BjrC1505 
Superfamily of BjrC1505 
complex unclassified

structured_complex

1 

Bp1_738 
Superfamily of Bp1_738 
complex unclassified

structured_complex

1 

Bp1_781 
Superfamily of Bp1_781 
complex unclassified

structured_complex

1 

Bp2_287 
Superfamily of Bp2_287 
complex unclassified

structured_complex

1 

BSR0441 
Superfamily of BSR0441 
complex unclassified

structured_complex

1 

BSR0602 
Superfamily of BSR0602 
complex unclassified

structured_complex

1 

BSR0653 
Superfamily of BSR0653 
complex unclassified

structured_complex

1 

BSR0709 
Superfamily of BSR0709 
complex unclassified

structured_complex

1 

BSR0739 
Superfamily of BSR0739 
complex unclassified

structured_complex

1 

BSR1073 
Superfamily of BSR1073 
complex unclassified

structured_complex

1 

BsrG 
Superfamily of BsrG 
complex unclassified

structured_complex

1 

BTH_s1 
Superfamily of BTH_s1 
complex unclassified

structured_complex

1 

C0719 
Superfamily of C0719 
complex unclassified

structured_complex

1 

C1_109596F_thermometer 
Superfamily of C1_109596F_thermometer 
complex unclassified

structured_complex

1 

CbSR1 
Superfamily of CbSR1 
complex unclassified

structured_complex

1 

CbSR12 
Superfamily of CbSR12 
complex unclassified

structured_complex

1 

CbSR2 
Superfamily of CbSR2 
complex unclassified

structured_complex

1 

CbSR3 
Superfamily of CbSR3 
complex unclassified

structured_complex

1 

CbSR4 
Superfamily of CbSR4 
complex unclassified

structured_complex

1 

CbSR9 
Superfamily of CbSR9 
complex unclassified

structured_complex

1 

CC2171 
Superfamily of CC2171 
complex unclassified

structured_complex

1 

cdiGMPII 
Superfamily of cdiGMPII 
complex unclassified

structured_complex

1 

CDKN2BAS 
Superfamily of CDKN2BAS 
complex unclassified

structured_complex

1 

Cis2_sRNA 
Superfamily of Cis2_sRNA 
complex unclassified

structured_complex

1 

Cis90_sRNA 
Superfamily of Cis90_sRNA 
complex unclassified

structured_complex

1 

CncR1 
Superfamily of CncR1 
complex unclassified

structured_complex

1 

CoTC_ribozyme 
Superfamily of CoTC_ribozyme 
complex unclassified

structured_complex

1 

CPEB3_ribozyme 
Superfamily of CPEB3_ribozyme 
complex unclassified

structured_complex

1 

CrcZ 
Superfamily of CrcZ 
complex unclassified

structured_complex

1 

CrfA 
Superfamily of CrfA 
complex unclassified

structured_complex

1 

cspA 
Superfamily of cspA 
complex unclassified

structured_complex

1 

Csr_Rsm_clan 
Families that are bound by multiple regulatory proteins called CsrA or RsmA. 
complex unclassified

structured_complex

7 

CTV_rep_sig 
Superfamily of CTV_rep_sig 
complex unclassified

structured_complex

1 

DAOAAS1_2 
Superfamily of DAOAAS1_2 
complex unclassified

structured_complex

1 

DLEU1_1 
Superfamily of DLEU1_1 
complex unclassified

structured_complex

1 

DLEU1_2 
Superfamily of DLEU1_2 
complex unclassified

structured_complex

1 

DM_SisR1 
Superfamily of DM_SisR1 
complex unclassified

structured_complex

1 

Downstreampeptide 
Superfamily of Downstreampeptide 
complex unclassified

structured_complex

1 

drzagam22 
Superfamily of drzagam22 
complex unclassified

structured_complex

1 

EBER1 
Superfamily of EBER1 
complex unclassified

structured_complex

1 

EF0408_EF0409 
Superfamily of EF0408_EF0409 
complex unclassified

structured_complex

1 

EF0820_EF0821 
Superfamily of EF0820_EF0821 
complex unclassified

structured_complex

1 

EF0869_EF0870 
Superfamily of EF0869_EF0870 
complex unclassified

structured_complex

1 

EF1368_EF1369 
Superfamily of EF1368_EF1369 
complex unclassified

structured_complex

1 

Entero_OriR 
Superfamily of Entero_OriR 
complex unclassified

structured_complex

1 

epsC 
Superfamily of epsC 
complex unclassified

structured_complex

1 

Erse 
Superfamily of Erse 
complex unclassified

structured_complex

1 

FdoG1_thermometer 
Superfamily of FdoG1_thermometer 
complex unclassified

structured_complex

1 

FMN 
Superfamily of FMN 
complex unclassified

structured_complex

1 

FTX_5 
Superfamily of FTX_5 
complex unclassified

structured_complex

1 

gadd7 
Superfamily of gadd7 
complex unclassified

structured_complex

1 

GcvB 
Superfamily of GcvB 
complex unclassified

structured_complex

1 

GIR1 
Superfamily of GIR1 
complex unclassified

structured_complex

1 

GNASAS1_4 
Superfamily of GNASAS1_4 
complex unclassified

structured_complex

1 

GOLLD 
Superfamily of GOLLD 
complex unclassified

structured_complex

1 

HDV_ribozyme 
Superfamily of HDV_ribozyme 
complex unclassified

structured_complex

1 

HEARO 
Superfamily of HEARO 
complex unclassified

structured_complex

1 

hilD_3p_UTR 
Superfamily of hilD_3p_UTR 
complex unclassified

structured_complex

1 

HOTTIP_3 
Superfamily of HOTTIP_3 
complex unclassified

structured_complex

1 

HOXA11AS1_2 
Superfamily of HOXA11AS1_2 
complex unclassified

structured_complex

1 

HOXA11AS1_4 
Superfamily of HOXA11AS1_4 
complex unclassified

structured_complex

1 

HOXA11AS1_6 
Superfamily of HOXA11AS1_6 
complex unclassified

structured_complex

1 

Hsp83_3_UTR 
Superfamily of Hsp83_3_UTR 
complex unclassified

structured_complex

1 

HYMAI 
Superfamily of HYMAI 
complex unclassified

structured_complex

1 

icaR_3p_UTR 
Superfamily of icaR_3p_UTR 
complex unclassified

structured_complex

1 

IFN_gamma 
Superfamily of IFN_gamma 
complex unclassified

structured_complex

1 

IMES1 
Superfamily of IMES1 
complex unclassified

structured_complex

1 

IS061 
Superfamily of IS061 
complex unclassified

structured_complex

1 

IS128 
Superfamily of IS128 
complex unclassified

structured_complex

1 

iscRS 
Superfamily of iscRS 
complex unclassified

structured_complex

1 

isrF 
Superfamily of isrF 
complex unclassified

structured_complex

1 

isrG 
Superfamily of isrG 
complex unclassified

structured_complex

1 

isrH 
Superfamily of isrH 
complex unclassified

structured_complex

1 

isrL 
Superfamily of isrL 
complex unclassified

structured_complex

1 

IsrM 
Superfamily of IsrM 
complex unclassified

structured_complex

1 

isrQ 
Superfamily of isrQ 
complex unclassified

structured_complex

1 

JA03 
Superfamily of JA03 
complex unclassified

structured_complex

1 

KCNQ1OT1_2 
Superfamily of KCNQ1OT1_2 
complex unclassified

structured_complex

1 

LINC00901 
Superfamily of LINC00901 
complex unclassified

structured_complex

1 

lincRNAp21_1 
Superfamily of lincRNAp21_1 
complex unclassified

structured_complex

1 

Lysine 
Superfamily of Lysine 
complex unclassified

structured_complex

1 

manA 
Superfamily of manA 
complex unclassified

structured_complex

1 

Mcr7 
Superfamily of Mcr7 
complex unclassified

structured_complex

1 

MIAT_exon5_3 
Superfamily of MIAT_exon5_3 
complex unclassified

structured_complex

1 

MicL 
Superfamily of MicL 
complex unclassified

structured_complex

1 

Mico1 
Superfamily of Mico1 
complex unclassified

structured_complex

1 

MOCO_RNA_motif 
Superfamily of MOCO_RNA_motif 
complex unclassified

structured_complex

1 

MPMV_package 
Superfamily of MPMV_package 
complex unclassified

structured_complex

1 

Ms1 
Superfamily of Ms1 
complex unclassified

structured_complex

1 

Ncrwmel02 
Superfamily of Ncrwmel02 
complex unclassified

structured_complex

1 

NRON 
Superfamily of NRON 
complex unclassified

structured_complex

1 

NrsZ 
Superfamily of NrsZ 
complex unclassified

structured_complex

1 

OLE 
Superfamily of OLE 
complex unclassified

structured_complex

1 

OppA_thermometer 
Superfamily of OppA_thermometer 
complex unclassified

structured_complex

1 

ovine_lenti_FSE 
Superfamily of ovine_lenti_FSE 
complex unclassified

structured_complex

1 

P17 
Superfamily of P17 
complex unclassified

structured_complex

1 

P24 
Superfamily of P24 
complex unclassified

structured_complex

1 

P33 
Superfamily of P33 
complex unclassified

structured_complex

1 

P34 
Superfamily of P34 
complex unclassified

structured_complex

1 

P4 
Superfamily of P4 
complex unclassified

structured_complex

1 

P6 
Superfamily of P6 
complex unclassified

structured_complex

1 

Parecho_CRE 
Superfamily of Parecho_CRE 
complex unclassified

structured_complex

1 

PART1_2 
Superfamily of PART1_2 
complex unclassified

structured_complex

1 

PCA3_2 
Superfamily of PCA3_2 
complex unclassified

structured_complex

1 

Pedorepair 
Superfamily of Pedorepair 
complex unclassified

structured_complex

1 

Phage_pRNA 
Superfamily of Phage_pRNA 
complex unclassified

structured_complex

1 

PhrS 
Superfamily of PhrS 
complex unclassified

structured_complex

1 

Pistol 
Superfamily of Pistol 
complex unclassified

structured_complex

1 

PKCuYV_BPYV 
Superfamily of PKCuYV_BPYV 
complex unclassified

structured_complex

1 

PKPYVV 
Superfamily of PKPYVV 
complex unclassified

structured_complex

1 

PKSPCSV 
Superfamily of PKSPCSV 
complex unclassified

structured_complex

1 

Polynucleobacter1 
Superfamily of Polynucleobacter1 
complex unclassified

structured_complex

1 

psaA 
Superfamily of psaA 
complex unclassified

structured_complex

1 

PseudomongroES 
Superfamily of PseudomongroES 
complex unclassified

structured_complex

1 

psRNA2 
Superfamily of psRNA2 
complex unclassified

structured_complex

1 

psRNA6 
Superfamily of psRNA6 
complex unclassified

structured_complex

1 

PVT1_1 
Superfamily of PVT1_1 
complex unclassified

structured_complex

1 

PVT1_2 
Superfamily of PVT1_2 
complex unclassified

structured_complex

1 

PVT1_4 
Superfamily of PVT1_4 
complex unclassified

structured_complex

1 

RAGATH6 
Superfamily of RAGATH6 
complex unclassified

structured_complex

1 

RAGATH8 
Superfamily of RAGATH8 
complex unclassified

structured_complex

1 

RalA 
Superfamily of RalA 
complex unclassified

structured_complex

1 

RCNMV_TE_DR1 
Superfamily of RCNMV_TE_DR1 
complex unclassified

structured_complex

1 

Rev11 
Superfamily of Rev11 
complex unclassified

structured_complex

1 

Rev13 
Superfamily of Rev13 
complex unclassified

structured_complex

1 

Rev24 
Superfamily of Rev24 
complex unclassified

structured_complex

1 

Rev39_5p_UTR 
Superfamily of Rev39_5p_UTR 
complex unclassified

structured_complex

1 

Rev41 
Superfamily of Rev41 
complex unclassified

structured_complex

1 

Rev42_5p_UTR 
Superfamily of Rev42_5p_UTR 
complex unclassified

structured_complex

1 

Rev44 
Superfamily of Rev44 
complex unclassified

structured_complex

1 

Rev72 
Superfamily of Rev72 
complex unclassified

structured_complex

1 

Ricks_sRNA10 
Superfamily of Ricks_sRNA10 
complex unclassified

structured_complex

1 

rivX 
Superfamily of rivX 
complex unclassified

structured_complex

1 

rli24 
Superfamily of rli24 
complex unclassified

structured_complex

1 

rli26 
Superfamily of rli26 
complex unclassified

structured_complex

1 

rli32 
Superfamily of rli32 
complex unclassified

structured_complex

1 

rli33 
Superfamily of rli33 
complex unclassified

structured_complex

1 

rli37 
Superfamily of rli37 
complex unclassified

structured_complex

1 

rli40 
Superfamily of rli40 
complex unclassified

structured_complex

1 

rli41 
Superfamily of rli41 
complex unclassified

structured_complex

1 

rli42 
Superfamily of rli42 
complex unclassified

structured_complex

1 

rli43 
Superfamily of rli43 
complex unclassified

structured_complex

1 

rli47 
Superfamily of rli47 
complex unclassified

structured_complex

1 

rli54 
Superfamily of rli54 
complex unclassified

structured_complex

1 

rli62 
Superfamily of rli62 
complex unclassified

structured_complex

1 

rliA 
Superfamily of rliA 
complex unclassified

structured_complex

1 

rliD 
Superfamily of rliD 
complex unclassified

structured_complex

1 

rliE 
Superfamily of rliE 
complex unclassified

structured_complex

1 

rliF 
Superfamily of rliF 
complex unclassified

structured_complex

1 

rliG 
Superfamily of rliG 
complex unclassified

structured_complex

1 

rliH 
Superfamily of rliH 
complex unclassified

structured_complex

1 

rliI 
Superfamily of rliI 
complex unclassified

structured_complex

1 

RMST_2 
Superfamily of RMST_2 
complex unclassified

structured_complex

1 

RMST_6 
Superfamily of RMST_6 
complex unclassified

structured_complex

1 

RMST_7 
Superfamily of RMST_7 
complex unclassified

structured_complex

1 

RNAIII 
Superfamily of RNAIII 
complex unclassified

structured_complex

1 

rne5 
Superfamily of rne5 
complex unclassified

structured_complex

1 

rneII 
Superfamily of rneII 
complex unclassified

structured_complex

1 

RRE 
Superfamily of RRE 
complex unclassified

structured_complex

1 

RsaC 
Superfamily of RsaC 
complex unclassified

structured_complex

1 

RsaH 
Superfamily of RsaH 
complex unclassified

structured_complex

1 

RsaJ 
Superfamily of RsaJ 
complex unclassified

structured_complex

1 

RsaOG 
Superfamily of RsaOG 
complex unclassified

structured_complex

1 

RSV_RNA 
Superfamily of RSV_RNA 
complex unclassified

structured_complex

1 

RUF1 
Superfamily of RUF1 
complex unclassified

structured_complex

1 

RUF20 
Superfamily of RUF20 
complex unclassified

structured_complex

1 

RUF21 
Superfamily of RUF21 
complex unclassified

structured_complex

1 

RUF4 
Superfamily of RUF4 
complex unclassified

structured_complex

1 

ryfA 
Superfamily of ryfA 
complex unclassified

structured_complex

1 

sagA 
Superfamily of sagA 
complex unclassified

structured_complex

1 

sau53 
Superfamily of sau53 
complex unclassified

structured_complex

1 

sbcD 
Superfamily of sbcD 
complex unclassified

structured_complex

1 

scr4676 
Superfamily of scr4676 
complex unclassified

structured_complex

1 

scr5238 
Superfamily of scr5238 
complex unclassified

structured_complex

1 

Sernc350 
Superfamily of Sernc350 
complex unclassified

structured_complex

1 

Sernc389 
Superfamily of Sernc389 
complex unclassified

structured_complex

1 

SgrS 
Superfamily of SgrS 
complex unclassified

structured_complex

1 

Six3os1_5 
Superfamily of Six3os1_5 
complex unclassified

structured_complex

1 

Six3os1_7 
Superfamily of Six3os1_7 
complex unclassified

structured_complex

1 

SMAD5AS1_1 
Superfamily of SMAD5AS1_1 
complex unclassified

structured_complex

1 

SMAD5AS1_2 
Superfamily of SMAD5AS1_2 
complex unclassified

structured_complex

1 

SMCR2_1 
Superfamily of SMCR2_1 
complex unclassified

structured_complex

1 

SMCR2_2 
Superfamily of SMCR2_2 
complex unclassified

structured_complex

1 

sot0042 
Superfamily of sot0042 
complex unclassified

structured_complex

1 

sot2652 
Superfamily of sot2652 
complex unclassified

structured_complex

1 

SOX2OT_exon1 
Superfamily of SOX2OT_exon1 
complex unclassified

structured_complex

1 

SOX2OT_exon3 
Superfamily of SOX2OT_exon3 
complex unclassified

structured_complex

1 

speF 
Superfamily of speF 
complex unclassified

structured_complex

1 

SpF66_sRNA 
Superfamily of SpF66_sRNA 
complex unclassified

structured_complex

1 

Sphinx_1 
Superfamily of Sphinx_1 
complex unclassified

structured_complex

1 

Spi1 
Superfamily of Spi1 
complex unclassified

structured_complex

1 

SprX 
Superfamily of SprX 
complex unclassified

structured_complex

1 

SPRY4IT1_2 
Superfamily of SPRY4IT1_2 
complex unclassified

structured_complex

1 

sR035 
Superfamily of sR035 
complex unclassified

structured_complex

1 

sraL 
Superfamily of sraL 
complex unclassified

structured_complex

1 

srg1 
Superfamily of srg1 
complex unclassified

structured_complex

1 

Ssr1 
Superfamily of Ssr1 
complex unclassified

structured_complex

1 

SSRC29 
Superfamily of SSRC29 
complex unclassified

structured_complex

1 

SSRC38 
Superfamily of SSRC38 
complex unclassified

structured_complex

1 

SSRC8_2 
Superfamily of SSRC8_2 
complex unclassified

structured_complex

1 

ST7OT4_1 
Superfamily of ST7OT4_1 
complex unclassified

structured_complex

1 

STnc100 
Superfamily of STnc100 
complex unclassified

structured_complex

1 

STnc170 
Superfamily of STnc170 
complex unclassified

structured_complex

1 

STnc30 
Superfamily of STnc30 
complex unclassified

structured_complex

1 

STnc361 
Superfamily of STnc361 
complex unclassified

structured_complex

1 

STnc470 
Superfamily of STnc470 
complex unclassified

structured_complex

1 

STnc500 
Superfamily of STnc500 
complex unclassified

structured_complex

1 

STnc510 
Superfamily of STnc510 
complex unclassified

structured_complex

1 

STnc550 
Superfamily of STnc550 
complex unclassified

structured_complex

1 

STnc590 
Superfamily of STnc590 
complex unclassified

structured_complex

1 

STnc630 
Superfamily of STnc630 
complex unclassified

structured_complex

1 

sucAII 
Superfamily of sucAII 
complex unclassified

structured_complex

1 

SurA 
Superfamily of SurA 
complex unclassified

structured_complex

1 

sX10 
Superfamily of sX10 
complex unclassified

structured_complex

1 

sX3 
Superfamily of sX3 
complex unclassified

structured_complex

1 

sX5 
Superfamily of sX5 
complex unclassified

structured_complex

1 

Tbox 
Superfamily of Tbox 
complex unclassified

structured_complex

1 

Teg22 
Superfamily of Teg22 
complex unclassified

structured_complex

1 

TeloSII_ncR42 
Superfamily of TeloSII_ncR42 
complex unclassified

structured_complex

1 

THF 
Superfamily of THF 
complex unclassified

structured_complex

1 

Toga_5_CRE 
Superfamily of Toga_5_CRE 
complex unclassified

structured_complex

1 

Tombus_3_IV 
Superfamily of Tombus_3_IV 
complex unclassified

structured_complex

1 

Tombus_4 
Superfamily of Tombus_4 
complex unclassified

structured_complex

1 

TP73AS1 
Superfamily of TP73AS1 
complex unclassified

structured_complex

1 

TPP 
Superfamily of TPP 
complex unclassified

structured_complex

1 

tsr0 
Superfamily of tsr0 
complex unclassified

structured_complex

1 

tsr23 
Superfamily of tsr23 
complex unclassified

structured_complex

1 

TTC28AS1_1 
Superfamily of TTC28AS1_1 
complex unclassified

structured_complex

1 

TUG1_3 
Superfamily of TUG1_3 
complex unclassified

structured_complex

1 

TUG1_4 
Superfamily of TUG1_4 
complex unclassified

structured_complex

1 

TwisterP4 
Superfamily of TwisterP4 
complex unclassified

structured_complex

1 

Va906 
Superfamily of Va906 
complex unclassified

structured_complex

1 

Vax2os1_2 
Superfamily of Vax2os1_2 
complex unclassified

structured_complex

1 

Vax2os1_3 
Superfamily of Vax2os1_3 
complex unclassified

structured_complex

1 

Vg1_ribozyme 
Superfamily of Vg1_ribozyme 
complex unclassified

structured_complex

1 

VRRNA 
Superfamily of VRRNA 
complex unclassified

structured_complex

1 

wcaG 
Superfamily of wcaG 
complex unclassified

structured_complex

1 

WT1AS_3 
Superfamily of WT1AS_3 
complex unclassified

structured_complex

1 

WT1AS_7 
Superfamily of WT1AS_7 
complex unclassified

structured_complex

1 

Xoo0 
Superfamily of Xoo0 
complex unclassified

structured_complex

1 

Xoo7 
Superfamily of Xoo7 
complex unclassified

structured_complex

1 

ydaOyuaA 
Superfamily of ydaOyuaA 
complex unclassified

structured_complex

1 

YenS 
Superfamily of YenS 
complex unclassified

structured_complex

1 

Yfr20 
Superfamily of Yfr20 
3H
complex unclassified

structured_complex
structured_simple

2 

Yfr7 
Superfamily of Yfr7 
complex unclassified

structured_complex

1 

YFV_3UTR 
Superfamily of YFV_3UTR 
complex unclassified

structured_complex

1 

ykoK 
Superfamily of ykoK 
complex unclassified

structured_complex

1 

Ysr140 
Superfamily of Ysr140 
complex unclassified

structured_complex

1 

Ysr155(RyfD) 
Superfamily of Ysr155(RyfD) 
complex unclassified

structured_complex

1 

Ysr201 
Superfamily of Ysr201 
complex unclassified

structured_complex

1 

Ysr34 
Superfamily of Ysr34 
complex unclassified

structured_complex

1 
