International institute of molecular and cell biology in Warzawa

Superfamilies

Superfamily Description Architecture Class nĀ° Families Structures
6S Superfamily of 6S hairpin structured_simple 1
6S-Flavo Superfamily of 6S-Flavo hairpin structured_simple 1
Actino-pnp Superfamily of Actino-pnp hairpin structured_simple 1
adapt33_2 Superfamily of adapt33_2 hairpin structured_simple 1
adapt33_4 Superfamily of adapt33_4 hairpin structured_simple 1
AEV_CRE Superfamily of AEV_CRE hairpin structured_simple 1
AMV_RNA1_SL Superfamily of AMV_RNA1_SL hairpin structured_simple 1
Atu_Ti3 Superfamily of Atu_Ti3 hairpin structured_simple 1
Atu_Ti4 Superfamily of Atu_Ti4 hairpin structured_simple 1
Bacillus-plasmid Superfamily of Bacillus-plasmid hairpin structured_simple 1
Bacteroid-trp Superfamily of Bacteroid-trp hairpin structured_simple 1
BLi_r0872 Superfamily of BLi_r0872 hairpin structured_simple 1
BM-sr0117 Superfamily of BM-sr0117 hairpin structured_simple 1
BSnc150 Superfamily of BSnc150 hairpin structured_simple 1
BsrC Superfamily of BsrC hairpin structured_simple 1
bxd_7 Superfamily of bxd_7 hairpin structured_simple 1
Cardiovirus_CRE Superfamily of Cardiovirus_CRE hairpin structured_simple 1
CC0196 Superfamily of CC0196 hairpin structured_simple 1
C/D-box Superfamily of C/D-box hairpin structured_simple 474
ceN23-1 Superfamily of ceN23-1 hairpin structured_simple 1
cHP Superfamily of cHP hairpin structured_simple 1
class_I_RNA Superfamily of class_I_RNA hairpin structured_simple 1
ClpQY_promoter Superfamily of ClpQY_promoter hairpin structured_simple 1
CnfY_thermometer Superfamily of CnfY_thermometer hairpin structured_simple 1
Corona_package Superfamily of Corona_package hairpin structured_simple 1
Corona_SL-III Superfamily of Corona_SL-III hairpin structured_simple 1
crcB Superfamily of crcB hairpin structured_simple 1
CRISPR-DR Superfamily of CRISPR-DR hairpin structured_simple 64
ctRNA_p42d Superfamily of ctRNA_p42d hairpin structured_simple 1
Cyano-1 Superfamily of Cyano-1 hairpin structured_simple 1
DGCR5 Superfamily of DGCR5 hairpin structured_simple 1
DicF Superfamily of DicF hairpin structured_simple 1
DLEU2_3 Superfamily of DLEU2_3 hairpin structured_simple 1
DLEU2_5 Superfamily of DLEU2_5 hairpin structured_simple 1
DLX6-AS1_1 Superfamily of DLX6-AS1_1 hairpin structured_simple 1
DnaX Superfamily of DnaX hairpin structured_simple 1
DPB Superfamily of DPB hairpin structured_simple 1
EAV_LTH Superfamily of EAV_LTH hairpin structured_simple 1
EBv-sisRNA-2 Superfamily of EBv-sisRNA-2 hairpin structured_simple 1
eeev_FSE Superfamily of eeev_FSE hairpin structured_simple 1
eiav_FSE Superfamily of eiav_FSE hairpin structured_simple 1
Entero_CRE Superfamily of Entero_CRE hairpin structured_simple 1
ES036 Superfamily of ES036 hairpin structured_simple 1
ES173 Superfamily of ES173 hairpin structured_simple 1
ES205 Superfamily of ES205 hairpin structured_simple 1
F6 Superfamily of F6 hairpin structured_simple 1
ffh Superfamily of ffh hairpin structured_simple 1
FIE3 Superfamily of FIE3 hairpin structured_simple 1
Flavo-1 Superfamily of Flavo-1 hairpin structured_simple 1
flpD Superfamily of flpD hairpin structured_simple 1
FMR1-AS1_1 Superfamily of FMR1-AS1_1 hairpin structured_simple 1
FMR1-AS1_2 Superfamily of FMR1-AS1_2 hairpin structured_simple 1
g2 Superfamily of g2 hairpin structured_simple 1
GABA3 Superfamily of GABA3 hairpin structured_simple 1
gabT Superfamily of gabT hairpin structured_simple 1
GAIT Superfamily of GAIT hairpin structured_simple 1
GlsR16_miR3 Superfamily of GlsR16_miR3 hairpin structured_simple 1
GlsR17_miR2 Superfamily of GlsR17_miR2 hairpin structured_simple 1
GlsR1_miR6 Superfamily of GlsR1_miR6 hairpin structured_simple 1
GlsR2_miR4 Superfamily of GlsR2_miR4 hairpin structured_simple 1
GlsR8_miR10 Superfamily of GlsR8_miR10 hairpin structured_simple 1
GNAS-AS1_3 Superfamily of GNAS-AS1_3 hairpin structured_simple 1
GNAS-AS1_5 Superfamily of GNAS-AS1_5 hairpin structured_simple 1
GRIK4_3p_UTR Superfamily of GRIK4_3p_UTR hairpin structured_simple 1
Gurken Superfamily of Gurken hairpin structured_simple 1
H19_1 Superfamily of H19_1 hairpin structured_simple 1
H19_2 Superfamily of H19_2 hairpin structured_simple 1
h2cR Superfamily of h2cR hairpin structured_simple 1
Hairpin ribozyme Superfamily of Hairpin ribozyme hairpin structured_simple 1
HAV_CRE Superfamily of HAV_CRE hairpin structured_simple 1
HCV_package Superfamily of HCV_package hairpin structured_simple 1
HCV_package-SL4629 Superfamily of HCV_package-SL4629 hairpin structured_simple 1
HCV_package-SL6067 Superfamily of HCV_package-SL6067 hairpin structured_simple 1
HCV_package-SL733 Superfamily of HCV_package-SL733 hairpin structured_simple 1
HCV_SLIV Superfamily of HCV_SLIV hairpin structured_simple 1
HCV_SLVII Superfamily of HCV_SLVII hairpin structured_simple 1
Hepadnavirus_epsilon Superfamily of Hepadnavirus_epsilon hairpin structured_simple 2
HepC_CRE Superfamily of HepC_CRE hairpin structured_simple 1
HgcE Superfamily of HgcE hairpin structured_simple 1
HIV-1_DIS Superfamily of HIV-1_DIS hairpin structured_simple 1
HIV-1_SD Superfamily of HIV-1_SD hairpin structured_simple 1
HIV-1_SL3 Superfamily of HIV-1_SL3 hairpin structured_simple 1
HIV-1_SL4 Superfamily of HIV-1_SL4 hairpin structured_simple 1
HIV_FE Superfamily of HIV_FE hairpin structured_simple 1
HIV_FS2 Superfamily of HIV_FS2 hairpin structured_simple 1
HIV_GSL3 Superfamily of HIV_GSL3 hairpin structured_simple 1
hopC Superfamily of hopC hairpin structured_simple 1
HOTAIR_1 Superfamily of HOTAIR_1 hairpin structured_simple 1
HOTAIR_3 Superfamily of HOTAIR_3 hairpin structured_simple 1
HOTAIRM1_3 Superfamily of HOTAIRM1_3 hairpin structured_simple 1
HOTTIP_1 Superfamily of HOTTIP_1 hairpin structured_simple 1
hsp17 Superfamily of hsp17 hairpin structured_simple 1
HSR-omega_1 Superfamily of HSR-omega_1 hairpin structured_simple 1
HSR-omega_2 Superfamily of HSR-omega_2 hairpin structured_simple 1
htlv_FSE Superfamily of htlv_FSE hairpin structured_simple 1
HtrA_thermometer Superfamily of HtrA_thermometer hairpin structured_simple 1
hvt-mir-H Superfamily of hvt-mir-H hairpin structured_simple 1
IBV_D-RNA Superfamily of IBV_D-RNA hairpin structured_simple 1
icaR_5p_UTR Superfamily of icaR_5p_UTR hairpin structured_simple 1
IRE_I Superfamily of IRE_I hairpin structured_simple 1
IRE_II Superfamily of IRE_II hairpin structured_simple 1
IRES_APC Superfamily of IRES_APC hairpin structured_simple 1
IsrR Superfamily of IsrR hairpin structured_simple 1
JEV_hairpin Superfamily of JEV_hairpin hairpin structured_simple 1
JUMPstart Superfamily of JUMPstart hairpin structured_simple 1
K10_TLS Superfamily of K10_TLS hairpin structured_simple 1
K_chan_RES Superfamily of K_chan_RES hairpin structured_simple 1
KCNQ1OT1_1 Superfamily of KCNQ1OT1_1 hairpin structured_simple 1
KCNQ1OT1_3 Superfamily of KCNQ1OT1_3 hairpin structured_simple 1
KRAS_3UTR Superfamily of KRAS_3UTR hairpin structured_simple 1
L13_leader Superfamily of L13_leader hairpin structured_simple 1
L19_leader Superfamily of L19_leader hairpin structured_simple 1
L21_leader Superfamily of L21_leader hairpin structured_simple 1
Lacto-rpoB Superfamily of Lacto-rpoB hairpin structured_simple 1
Lacto-usp Superfamily of Lacto-usp hairpin structured_simple 1
Lambda_thermo Superfamily of Lambda_thermo hairpin structured_simple 1
let-7 Superfamily of let-7 hairpin structured_simple 1
lin-4 Superfamily of lin-4 hairpin structured_simple 1
lincRNA-p21_2 Superfamily of lincRNA-p21_2 hairpin structured_simple 1
Lnt Superfamily of Lnt hairpin structured_simple 1
lsy-6 Superfamily of lsy-6 hairpin structured_simple 1
ManX_thermometer Superfamily of ManX_thermometer hairpin structured_simple 1
MAT2A_A Superfamily of MAT2A_A hairpin structured_simple 1
MAT2A_B Superfamily of MAT2A_B hairpin structured_simple 1
MAT2A_C Superfamily of MAT2A_C hairpin structured_simple 1
MAT2A_D Superfamily of MAT2A_D hairpin structured_simple 1
MAT2A_E Superfamily of MAT2A_E hairpin structured_simple 1
MAT2A_F Superfamily of MAT2A_F hairpin structured_simple 1
MEG8_1 Superfamily of MEG8_1 hairpin structured_simple 1
mir-1017 Superfamily of mir-1017 hairpin structured_simple 1
MIR1151 Superfamily of MIR1151 hairpin structured_simple 1
MIR1223 Superfamily of MIR1223 hairpin structured_simple 1
mir-1225 Superfamily of mir-1225 hairpin structured_simple 1
mir-124 Superfamily of mir-124 hairpin structured_simple 1
mir-1302 Superfamily of mir-1302 hairpin structured_simple 1
mir-1306 Superfamily of mir-1306 hairpin structured_simple 1
mir-132 Superfamily of mir-132 hairpin structured_simple 1
mir-1419 Superfamily of mir-1419 hairpin structured_simple 1
mir-1497 Superfamily of mir-1497 hairpin structured_simple 1
mir-15 Superfamily of mir-15 hairpin structured_simple 1
MIR159 Superfamily of MIR159 hairpin structured_simple 1
MIR164 Superfamily of MIR164 hairpin structured_simple 1
mir-166 Superfamily of mir-166 hairpin structured_simple 1
mir-1662 Superfamily of mir-1662 hairpin structured_simple 1
MIR167_1 Superfamily of MIR167_1 hairpin structured_simple 1
mir-1803 Superfamily of mir-1803 hairpin structured_simple 1
mir-1937 Superfamily of mir-1937 hairpin structured_simple 1
mir-2494 Superfamily of mir-2494 hairpin structured_simple 1
mir-252 Superfamily of mir-252 hairpin structured_simple 1
mir-2780 Superfamily of mir-2780 hairpin structured_simple 1
mir-2833 Superfamily of mir-2833 hairpin structured_simple 1
mir-290 Superfamily of mir-290 hairpin structured_simple 2
MIR2907 Superfamily of MIR2907 hairpin structured_simple 1
mir-2968 Superfamily of mir-2968 hairpin structured_simple 1
mir-2970 Superfamily of mir-2970 hairpin structured_simple 1
mir-2973 Superfamily of mir-2973 hairpin structured_simple 1
mir-2985-2 Superfamily of mir-2985-2 hairpin structured_simple 1
mir-301 Superfamily of mir-301 hairpin structured_simple 1
mir-31 Superfamily of mir-31 hairpin structured_simple 1
mir-327 Superfamily of mir-327 hairpin structured_simple 1
mir-36 Superfamily of mir-36 hairpin structured_simple 1
mir-393 Superfamily of mir-393 hairpin structured_simple 1
MIR396 Superfamily of MIR396 hairpin structured_simple 1
MIR478 Superfamily of MIR478 hairpin structured_simple 1
mir-554 Superfamily of mir-554 hairpin structured_simple 1
mir-56 Superfamily of mir-56 hairpin structured_simple 1
mir-601 Superfamily of mir-601 hairpin structured_simple 1
mir-611 Superfamily of mir-611 hairpin structured_simple 1
mir-638 Superfamily of mir-638 hairpin structured_simple 1
mir-785 Superfamily of mir-785 hairpin structured_simple 1
mir-788 Superfamily of mir-788 hairpin structured_simple 1
MIR807 Superfamily of MIR807 hairpin structured_simple 1
mir-81 Superfamily of mir-81 hairpin structured_simple 1
MIR811 Superfamily of MIR811 hairpin structured_simple 1
MIR820 Superfamily of MIR820 hairpin structured_simple 1
MIR821 Superfamily of MIR821 hairpin structured_simple 1
MIR824 Superfamily of MIR824 hairpin structured_simple 1
MIR845_2 Superfamily of MIR845_2 hairpin structured_simple 1
MIR854 Superfamily of MIR854 hairpin structured_simple 1
mir-872 Superfamily of mir-872 hairpin structured_simple 1
mir-924 Superfamily of mir-924 hairpin structured_simple 1
mir-965 Superfamily of mir-965 hairpin structured_simple 1
miRNA1 Superfamily of miRNA1 hairpin structured_simple 39
miRNA2 Superfamily of miRNA2 hairpin structured_simple 428
Moco-II Superfamily of Moco-II hairpin structured_simple 1
mraW Superfamily of mraW hairpin structured_simple 1
MS2 Superfamily of MS2 hairpin structured_simple 1
Ms_AS-5 Superfamily of Ms_AS-5 hairpin structured_simple 1
Ms_IGR-4 Superfamily of Ms_IGR-4 hairpin structured_simple 1
Ms_IGR-8 Superfamily of Ms_IGR-8 hairpin structured_simple 1
msiK Superfamily of msiK hairpin structured_simple 1
msr Superfamily of msr hairpin structured_simple 1
mycoplasma_FSE Superfamily of mycoplasma_FSE hairpin structured_simple 1
NBR2 Superfamily of NBR2 hairpin structured_simple 1
NCRUPAR_1 Superfamily of NCRUPAR_1 hairpin structured_simple 1
neisseria_FSE Superfamily of neisseria_FSE hairpin structured_simple 1
Noro_CRE Superfamily of Noro_CRE hairpin structured_simple 1
nuoG Superfamily of nuoG hairpin structured_simple 1
Oskar_OES Superfamily of Oskar_OES hairpin structured_simple 1
Phe_leader Superfamily of Phe_leader hairpin structured_simple 1
PK-repBA Superfamily of PK-repBA hairpin structured_simple 1
Pospi_RY Superfamily of Pospi_RY hairpin structured_simple 1
potC Superfamily of potC hairpin structured_simple 1
PreQ1 Superfamily of PreQ1 hairpin structured_simple 1
PrfA Superfamily of PrfA hairpin structured_simple 1
Prion_pknot Superfamily of Prion_pknot hairpin structured_simple 1
pRNA Superfamily of pRNA hairpin structured_simple 1
psbNH Superfamily of psbNH hairpin structured_simple 1
PsrR1 Superfamily of PsrR1 hairpin structured_simple 1
PYLIS_1 Superfamily of PYLIS_1 hairpin structured_simple 1
PYLIS_6 Superfamily of PYLIS_6 hairpin structured_simple 1
PyrC_leader Superfamily of PyrC_leader hairpin structured_simple 1
PyrD_leader Superfamily of PyrD_leader hairpin structured_simple 1
PyrG_leader Superfamily of PyrG_leader hairpin structured_simple 1
Pyrobac-1 Superfamily of Pyrobac-1 hairpin structured_simple 1
rdlD Superfamily of rdlD hairpin structured_simple 1
REN-SRE Superfamily of REN-SRE hairpin structured_simple 1
RF_site1 Superfamily of RF_site1 hairpin structured_simple 1
Rhino_CRE Superfamily of Rhino_CRE hairpin structured_simple 1
rhtB Superfamily of rhtB hairpin structured_simple 1
rli31 Superfamily of rli31 hairpin structured_simple 1
RMST_1 Superfamily of RMST_1 hairpin structured_simple 1
RMST_3 Superfamily of RMST_3 hairpin structured_simple 1
RNA-OUT Superfamily of RNA-OUT hairpin structured_simple 1
Rota_CRE Superfamily of Rota_CRE hairpin structured_simple 1
rox1 Superfamily of rox1 hairpin structured_simple 1
rox2 Superfamily of rox2 hairpin structured_simple 1
RSV_PBS Superfamily of RSV_PBS hairpin structured_simple 1
RybB Superfamily of RybB hairpin structured_simple 1
s2m Superfamily of s2m hairpin structured_simple 1
SAH_riboswitch Superfamily of SAH_riboswitch hairpin structured_simple 1
SAM_alpha Superfamily of SAM_alpha hairpin structured_simple 1
SAM-SAH Superfamily of SAM-SAH hairpin structured_simple 1
SAM_V Superfamily of SAM_V hairpin structured_simple 1
sau-19 Superfamily of sau-19 hairpin structured_simple 1
sau-30 Superfamily of sau-30 hairpin structured_simple 1
sau-31 Superfamily of sau-31 hairpin structured_simple 1
sau-5949 Superfamily of sau-5949 hairpin structured_simple 1
SECIS_1 Superfamily of SECIS_1 hairpin structured_simple 1
SECIS_2 Superfamily of SECIS_2 hairpin structured_simple 1
SECIS_3 Superfamily of SECIS_3 hairpin structured_simple 1
SECIS_4 Superfamily of SECIS_4 hairpin structured_simple 1
SECIS_5 Superfamily of SECIS_5 hairpin structured_simple 1
S-element Superfamily of S-element hairpin structured_simple 1
shuA_thermo Superfamily of shuA_thermo hairpin structured_simple 1
snaR-A Superfamily of snaR-A hairpin structured_simple 1
sobemo_FSE Superfamily of sobemo_FSE hairpin structured_simple 1
Spd-sr07 Superfamily of Spd-sr07 hairpin structured_simple 1
Spd-sr37 Superfamily of Spd-sr37 hairpin structured_simple 1
SpF01_sRNA Superfamily of SpF01_sRNA hairpin structured_simple 1
SpF36_sRNA Superfamily of SpF36_sRNA hairpin structured_simple 1
SpF43_sRNA Superfamily of SpF43_sRNA hairpin structured_simple 1
SpF56_sRNA Superfamily of SpF56_sRNA hairpin structured_simple 1
SpF61_sRNA Superfamily of SpF61_sRNA hairpin structured_simple 1
SpR10_sRNA Superfamily of SpR10_sRNA hairpin structured_simple 1
SpR14_sRNA Superfamily of SpR14_sRNA hairpin structured_simple 1
Spy392987 Superfamily of Spy392987 hairpin structured_simple 1
sroH Superfamily of sroH hairpin structured_simple 1
SscA Superfamily of SscA hairpin structured_simple 1
ST7-AS1_1 Superfamily of ST7-AS1_1 hairpin structured_simple 1
ST7-AS2_1 Superfamily of ST7-AS2_1 hairpin structured_simple 1
ST7-OT3_1 Superfamily of ST7-OT3_1 hairpin structured_simple 1
ST7-OT3_3 Superfamily of ST7-OT3_3 hairpin structured_simple 1
ST7-OT3_4 Superfamily of ST7-OT3_4 hairpin structured_simple 1
STnc230 Superfamily of STnc230 hairpin structured_simple 1
STnc320 Superfamily of STnc320 hairpin structured_simple 1
STnc420 Superfamily of STnc420 hairpin structured_simple 1
STnc480 Superfamily of STnc480 hairpin structured_simple 1
sucC Superfamily of sucC hairpin structured_simple 1
sX5 Superfamily of sX5 hairpin structured_simple 1
t44 Superfamily of t44 hairpin structured_simple 1
TCV_H4 Superfamily of TCV_H4 hairpin structured_simple 1
TCV_H5 Superfamily of TCV_H5 hairpin structured_simple 1
TCV_Pr Superfamily of TCV_Pr hairpin structured_simple 1
TeloSII_ncR45 Superfamily of TeloSII_ncR45 hairpin structured_simple 1
TeloSII_ncR49 Superfamily of TeloSII_ncR49 hairpin structured_simple 1
toga_FSE Superfamily of toga_FSE hairpin structured_simple 1
Tombus_IRE Superfamily of Tombus_IRE hairpin structured_simple 1
ToxI Superfamily of ToxI hairpin structured_simple 1
ToxT_thermometer Superfamily of ToxT_thermometer hairpin structured_simple 1
tp2 Superfamily of tp2 hairpin structured_simple 1
tracrRNA Superfamily of tracrRNA hairpin structured_simple 1
TUG1_1 Superfamily of TUG1_1 hairpin structured_simple 1
U1A_PIE Superfamily of U1A_PIE hairpin structured_simple 1
U7 Superfamily of U7 hairpin structured_simple 1
UnaL2 Superfamily of UnaL2 hairpin structured_simple 1
URE2_IRES Superfamily of URE2_IRES hairpin structured_simple 1
Vault Superfamily of Vault hairpin structured_simple 1
veev_FSE Superfamily of veev_FSE hairpin structured_simple 1
Virus_CITE_5 Superfamily of Virus_CITE_5 hairpin structured_simple 1
weev_FSE Superfamily of weev_FSE hairpin structured_simple 1
WLE3 Superfamily of WLE3 hairpin structured_simple 1
WsnRNA46 Superfamily of WsnRNA46 hairpin structured_simple 1
WsnRNA59 Superfamily of WsnRNA59 hairpin structured_simple 1
WT1-AS_5 Superfamily of WT1-AS_5 hairpin structured_simple 1
Xist_exon4 Superfamily of Xist_exon4 hairpin structured_simple 1
XIST_intron Superfamily of XIST_intron hairpin structured_simple 1
Yar_1 Superfamily of Yar_1 hairpin structured_simple 1
ybhL Superfamily of ybhL hairpin structured_simple 1
YrlB Superfamily of YrlB hairpin structured_simple 1
Y_RNA Superfamily of Y_RNA hairpin structured_simple 1
Ysr209 Superfamily of Ysr209 hairpin structured_simple 1
ZNFX1-AS1_2 Superfamily of ZNFX1-AS1_2 hairpin structured_simple 1
ZNFX1-AS1_3 Superfamily of ZNFX1-AS1_3 hairpin structured_simple 1
ZNRD1-AS1_1 Superfamily of ZNRD1-AS1_1 hairpin structured_simple 1
ZNRD1-AS1_3 Superfamily of ZNRD1-AS1_3 hairpin structured_simple 1