Results for job: CPSF1_HUMAN_N
All residues whose disorder probability is over 0.5 are considered as disordered.For visibility only 4 plots corresponding to predictions from final metapredictions had been shown. To see results from primary methods click on the shadowed name of method in legend (the left side of plot).
Alternatively you can see results in simple text format here
Short description of meta methods:
MetaDisorderMD2 -CASP9 winning method
(group number 147) - a method based on 13 disorder predictors and gaps
in alignment produced by 8 fold recognition methods, optimized by Sww
score (see Help page for details) using genetic algorithm. If you are looking for the most
accurate disorder predictor, you should use this one, according CASP9
its AUC is 0.839; MetaDisorderMD2 result file 
MetaDisorderMD - (group 374, fourth place in CASP9), AUC 0.816, similar to MetaDisorderMD2, but during optimization via AUC is 0.839; MetaDisorderMD result file
MetaDisorder - CASP8 winning method (group 153 in casp8, and group 010 in casp9) - metaprediction based on 13 disorder predictors AUC is 0.839; MetaDisorder3D result file
MetaDisorder3D - (group 421), counts gaps as disorder in top ten alignments produced by 8 different fold recognition methods, method and alignment efficiency to detect disorder was optimized by GA, tested during CASP9 as a reference to other meta methods, results are far AUC is 0.839; MetaDisorder result file
MetaDisorderMD - (group 374, fourth place in CASP9), AUC 0.816, similar to MetaDisorderMD2, but during optimization via AUC is 0.839; MetaDisorderMD result file
MetaDisorder - CASP8 winning method (group 153 in casp8, and group 010 in casp9) - metaprediction based on 13 disorder predictors AUC is 0.839; MetaDisorder3D result file
MetaDisorder3D - (group 421), counts gaps as disorder in top ten alignments produced by 8 different fold recognition methods, method and alignment efficiency to detect disorder was optimized by GA, tested during CASP9 as a reference to other meta methods, results are far AUC is 0.839; MetaDisorder result file
Primary predictors used by meta methods:
a) fold recognition methods:
HHsearch run over pdb70 database
| 1........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480.......490.......500.......510.......520.......530.......540.......550.......560.......570.......580.......590.......600.......610.......620.......630.......640.......650.......660.......670.......680.......690.......700.......710.......720.......730.......740.......750.......760.......770.......780.......790.......800.......810.......820.......830.......840.......850.......860.......870.......880.......890.......900.......910.......920.......930.......940.......950.......960.......970.......980....... | ||||
| pdbid | score | model | MYAVYKQAHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGKAHREKLELAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVVFAVNSLLYLNQSVPPYGVALNSLTTGTTAFPLRTQEGVRITLDCAQATFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASAVREAADKEEPPSKKKRVDATAGWSAAGKSVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSILNIGPCANAAVGEPAFLSEEFQNSPEPDLEIVVCSGHGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEEEDNPKGEGTEQEPSTTPEADDDGRRHGFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQLHFIPVDLGAPIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPLHHQSKVITLCLYRDLSGMFTTESRLGGARDELGGRSGPEAEGLGSETSPTVDDEEEMLYGDSGSLFSPSKEEARRSSQPPADRDPAPFRAEPTHWCLLVRENGTMEIYQLPDWRLVFLVKNFPVGQRVLVDSSFGQPTTQGEARREEATRQGELPLVKEVLLVALGSRQSRPYLLVHVDQELLIYEAFPHDSQLGQGNLKVRFKKVPHNINFREKKPKPSKKKAEGGGAEEGAGARGRVARFRYFEDIYGYSGVFICGPSPHWLLVTGRGALRLHPMAIDGPVDSFAPFHNVNCPRGFLYF | |
| 3ei3 A | 100.00 |  |
SYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTA------------------EGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIITRAHGNVQDR---IG-RPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKE---------------LKAFNIRLEEL-----HVIDVKFLYGCQAPTICFVYQDPQ---GR------HVKT--YEVSLREKEFKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYL-AI---------APPIIKQ----S-TIVCH--NRVDGSRYLLGDMEGRLFMLLLEKDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDS-------------------------N-E-Q-----------------------------GSYVVAMETFTNLGPIVDMCVVDLE---------RQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSD-------------------------PNRETDDTLVLSFVGQTRVLMLGEEVEETELMGFVDDQQTFFCGNVAHQQ-LIQITSASVRLVSQEALVSEWKEPQAKNISVASCNSSQVVVAV-GRALYYLQIHP-QELRQ-------ISHTEMEHEVACLDITPLGDS------------------------------------------------------------------------NGLSPLCAIGLWDISARILKLPSFELLHKEM--------LG--------------------G--EIIPRSILMTTFE---SSHYLLCALGDGALFYFGLNIE----TGLL--SDRKK------VT--------------------LGTQPTVLRTFRSL-STTNVFACSDRPTVIYSS-NHKLVFSNVNLK-EVNYMCPLNSDGYPDSLALA | |
| 3i2n A | 80.59 | |
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSAFEKPQIIAH--I--------QKG------FNYTVFDCKWVPSAFVTMGGTGVIQLYEIQHG--DLKLLREI---EKAKPIKCGTFGAQRYLATGDFGGNLHIWNLEAPEM---------------------------------------------------------PVYSVKGH-----KEIINAIDGIGGLG--------IGEGAPEIVTGS--RDGTVKVWDPRQKDDPVANMEPVQKRDCWTVAFGNAY------------------------NQEERVVCAGYDNGDIKLRNMALRWETNSLEFDRKDNKLVATSL----------EGKFHVFDMRTPTKGFAKAHKSTVWQVRHLNRLFLTAGGAGGLHLWKYEYPIQRS----KK--DSEGIEMGSVSLLQNVTLSTQ----------------------------------------------------------------PISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNKI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |
| 3jro A | 22.32 | |
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVVIANAHNELIHDAVLDYYGKRLATCSS----------DKTIKIFEVEKLIDTLT-GHEGPVWRVDWAGTILASCSYDGKVLIWKEENGRWS----QIA---VHAVHSASVNSVQWAPHE----------------------------------------------------------------------------YGPLLLVASSDGKVSVVEFKENGTTIIIDAHAI--G-----------------------------VNSASWAPAHGTKESRKFVTGADNLVKIWKYNSDAQTHSDWVRDVAWSPTVSYLASV---------SQDRTCWTQDNEQGWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPAGEVHQGGGGGATSKE | |
| 2byk A | 21.55 | |
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGEPRSQPPVERPPTAETFLPLSRVR-TIMKSSM-DTGLITNEVLFLMTKCTELFVRHLAGAAYTEEGQRPGEALKYEHLSQVVNK-NKNLEFLLQIVPQKIRVHQFQEM---------LRLNRSAG-SDDDDDDDDDDDEEESESES-ES-DE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |
| 4a11 B | 20.51 | |
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MLGF------LSARQTGEDPLRLRRAESTRRVLGLELKDRDVERIHGGGINTLDIEGRYMLSGGSDGVIVLYDLENSSRQSY---YTCKAVCDVHRYSVETVQWYP-----------------------------------------------------------------------------HDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEET--------------------------------VYSHHMSPVST--KHCLVAVGRGPKVQLCDLKSGSCGHRQEILAVSWSPRYDYILATASRVKLWDVRRCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLKFTVSCVFVPYGSTIAV | |
| 3mmy A | 19.22 | |
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSLFGTTSGF-GTSGTSMFGSTDNHSPDDSIGCLSFS--------------PPTLFLIAGS--WANDVRCWEVQDGQTIPK--AQQMHTPVLDVCWSD----------------------------DGSKVFTASCDKTAKMWSNQAIAPVKTIHWAPNYSCVMTGSW----------DKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFR--R-----IESPLKHQHRCVAIFKDKQNK--------------------------------------------------------------------------PTGFALGSIEGRVAIHYINPPNPNFTFKCHRFHPTLATVGSDGR-FSF------WDKD--ARTKLKTQPISACCFNHNGNIFAYASYDWSKGHEFYNPQ-----KKNYIFLRNAAEELKPRNKK------------------------------------------------------------------------------------- | |
| 1pgu A | 13.03 | |
EWSSS-SMH--QDHSNLVSLDN-SK-AQEYSSSWDDTLKVNGITKHEFGSQPK---VASANNDGTGDIIKSVRLNSPGSAVSLS------QNYVAVGLEGNTIQV--FKLSDLEVSF---DLKTP--------LRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWARTSKINAISWKPDLVATG-SLD-TNIFIYSIKALNAHKDGVNNLLWETPST---LVSS-GADACIKRWNVVLE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |
| 1yfq A | 11.23 | |
VEFFDFAFRCHRLLAYPVNSIEFSPRHKFLYTAGSGIISCWNLQT------------------R--KKIKNFAKEDSVVKIA------CSDNILCLATSDDTFKTNAAIDQTINASSIYIIFYENP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |
| 3scy A | 9.76 | |
AFRYAGMIQTAADAQGSGDIHL-SPDGKYLYASNRDGVAIFKVDET----------------NGTLTKVGYQLTGIHPRNF---IIT-PNGKYLLVACRDNVIQIFERDQATGLLTDIKKD-IK---V-D------KPVCLKFVD----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |
| 2xyi A | 9.73 | |
IWDTRHTVDAHT---AEVNCLSFNPYSEFILATGSKTVALWDLRNLK-----------------L--KLHSFESKDEIFQV---QWSPHNETILASSGTDRRLHV--WDLSKIGEEQS-TEDAEDGPPEIHGGHTAKISDFSWNPNEPIICSVSEDNIMQVWQMAENVYNDEEP----------EIPASELETNT---A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
HHsearch run over CDD database
| 1........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480.......490.......500.......510.......520.......530.......540.......550.......560.......570.......580.......590.......600.......610.......620.......630.......640.......650.......660.......670.......680.......690.......700.......710.......720.......730.......740.......750.......760.......770.......780.......790.......800.......810.......820.......830.......840.......850.......860.......870.......880.......890.......900.......910.......920.......930.......940.......950.......960.......970.......980....... | ||||
| pdbid | score | model | MYAVYKQAHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGKAHREKLELAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVVFAVNSLLYLNQSVPPYGVALNSLTTGTTAFPLRTQEGVRITLDCAQATFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASAVREAADKEEPPSKKKRVDATAGWSAAGKSVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSILNIGPCANAAVGEPAFLSEEFQNSPEPDLEIVVCSGHGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEEEDNPKGEGTEQEPSTTPEADDDGRRHGFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQLHFIPVDLGAPIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPLHHQSKVITLCLYRDLSGMFTTESRLGGARDELGGRSGPEAEGLGSETSPTVDDEEEMLYGDSGSLFSPSKEEARRSSQPPADRDPAPFRAEPTHWCLLVRENGTMEIYQLPDWRLVFLVKNFPVGQRVLVDSSFGQPTTQGEARREEATRQGELPLVKEVLLVALGSRQSRPYLLVHVDQELLIYEAFPHDSQLGQGNLKVRFKKVPHNINFREKKPKPSKKKAEGGGAEEGAGARGRVARFRYFEDIYGYSGVFICGPSPHWLLVTGRGALRLHPMAIDGPVDSFAPFHNVNCPRGFLYF | |
| lcl|cons | 100.00 | |
MFAVYKQEHDPTVVENSSAGLFTNNRTENLVVAGTNILRVYRISRDAEALTKNDPGDMGKAHRKKLELVAEFKLFGNVTSIAKLPLKGSNRDALLLLFKDAKISVLEFDPQTNSLRTLSLHYFEGPEFRKGLVGRAKIPTVRVDPDSRCALLLVYGLRMAILPFRVEHLDDEELFPSGFSKSSFTAPSYVIALRELDEKIKNIIDFQFLHGYYEPTLAILYEPEQTWAGRVILRKDTCVLVAISLNITQKVHPVIWSVLSLPFDCYQATAVPTPIGGVLVFTVNNLIYLNQSVSPYGVALNSYASKYTAFPLIPQSGVRIELDCANATWISNDKCVISLKNGDLYLLTLILDIGRSVQLLHFDKFKASVLATSIVGHGNNLLFLGSRLGNSLLLRFSELLQRASEGVRREEGDTESDGYSKKRVDDTDVRRDDEKSAELFEAGSEENYGSGAQETVQP--FSFEVCDSLPNIGPITDFAVGKRSSASEAEGLSPHNKLELVATSGHGKNGALSVIRRSIRPEIATEFELPGCVDIWTVFIKGRKREE--------------------DNTQHLYLILSTESRTMILETGEELLEVSGSGFTRDGPTLFAGNLGNERRIVQVTPSGLRLLDGDRMLQRIPFDSGAIVVQTSVADPYVAVRSSEGRITLYDLEEKSH-----RLALHDP---MSFKVVSVSLPADLSGMFTTLSDLSLKGNEANGRSS-EAEGLQSLP-CKVDDEEE----------------------------------QEPYWCVFVTESGTLEIYALPDFDLVFEVDMFDTGNRVLMDSRLRGPTTN---------KESEDLELKQLFVNPLGSEFKEPHLFLVVDNEILIYKAFP---QLSQGNLKVFFKKVPHNLNIRTDKPHFLCKKREGGGAEEGASVSVIVQRMTYFEDIGGHSGVFVTGSKPYLILLTFRGVLRFHPVFGNGPVGSFAPFHNVNCPRGFIYV | |
| lcl|cons | 100.00 | |
MFLYSLTLQNQTGIVQAIYGNFSGPKAQEIVLGRGSILELYRIDE----------------NDGRLKTICRQEVFGTIRSLAAFRLTGGTKDYLAVGSDSGRISILEYNNEKNHFEKLHQETF----GKSGCRRIVPGQYLAIDPKGRAVMISAVEKQKLVYVLNRDGAARLTISSPLEAHKAHSICLDLVGVDGFENPIFAALERDYSEADNDPTGEA-----------ATMTQKVLTFYELDLGLNHVVRK--AS---EPVNHFGNFLLTVPGGGVLVCAENYLLYRNLGHPDVRIPIERRI-----NELSDAEDGVLIVSSAEHKTKSMFFFLLQTEYGDLFKLTLEHDG-DNVVELRLKYFDTVPCALQLCILKTGFLFVASEFGNHRLYQFEKLG---------------------------EEDDDFSNAMTSEE-------G-KSVFFEPRILKNLSPVSSVESLSPLLDISIGDD---------SNEDTPQIYSACGRGPRSSLRILRNGLEVSELLVTELPGNPATWTVKKN-------------------------ITDVYDSYIVVSFVNGTLVLSIGESVEEVTDSGFLSTTPTLACSLMGDDS-LVQIHPDGIRHIRPTKRINEWKTPERVRIVKCAVNRRQIVVALSNGELVYFEGDVSGQ------LNEFTERVTLSTDVACLAIGQDPEGEKRSRFLALASVDNMVRIISLDPSDCLQPLSVQG-------------------LSSPPESLCIVEMEATGGTDVAQLYLLIGLRNGVLLRFQLLDIRTRFLG-------------------------------------LRPVKLFPISMRGQSDVLALSSRWLLYTYQQEFHLTPISYSTLE--------------------------------------------------HASPFCSEQCPEGIVAISKNTLRIIALDKLGKVLNVDGFPLAYTPRKVVIH | |
| COG5161 | 100.00 | |
MNYLYSDESDWTVTEGCSAGLFTPSRTCSLLVYNGNILAVRLWKYD-----------------SGLVLVDEHMLLEKVTQIEKYPQISSEQDGLLLLTHRAKISLLRFDSQANEFRTISLHYYEGKFKGKSLVELAKFSTLEFDIRS-SCALLFNEDIGNFLPFHVNKNDDDEVRIDVDPGKFS-APSKVLKFSELDGKIKNIIDFVFLENYSIPTVALLYDPKLSLPRKYTILKNPYNAIVFTLDLGAGRSAVIDEFLVLPRDFRVTVAGPV---GALLFGSNELILIDSTGSSYTIPLNSMSEKYGGNKVEDISDVNCFSRGTTSIWIPSETLFLGDLNGDRYYLRISMDG-KRIIGFDIASLEKGSAVSCVGHVNNLLFFGGVGDSNSRVLRIKSLLPTIETRA-------------SEGVGPLEGGNDEEMDDEYSAPENKLFGNKEQEVRRQDEPYDAELFNALSNAGPITDFAVGKVDVEKGLPIPNIGL-LNLVVTKGSDSEAALAVEGTSLEPCICTVSSFIPLEIVWSQKIR--------------------------GYLRLDFYILSRVSDSRIFRWSEEFLLEVSGEYTRDVNTLLFVEFGEENRVVQVTPSYLLRYDQDRMLGRVEFASR-AVEARSVRDPLILVVRDSGKILTFYDREKNMRLFKIDLVTCLADAKNKSFVLSDS-------------NSLGIFDIGKRISQLEPC------------------------------------------------------LVKGLPYAIQFSPEASPMDLAGEEDGDDQLTEISMSLT-----------YNLIDMLFRLPSIGNYMVAYLGLDLKEEYLFDNSSSEIVFYKTHLPR--------HVSFNLN----VTRNDLAITGAP----DNADIKAFSSVGRIDMVFIKAVG-HSFMFVTGKGPFLCRSRYTSSSKAFH-RGNIPLVSVIPLSK----RGYLMV | |
| lcl|cons | 100.00 | |
SMNYVVTAQKPTAVVTAVVGNFTSPENLNLIVAKGNRLEILLVEPN------------------GLQPITSVPIFGTIATIALFRPPGSDKDYLFVATDSYRYFILEWDESIQVVTRAHGDVS----DRSG-RPSDNGQILLVDPKGRVIGLHLYQGLFKVIPIDSDE-----------SHTGGLLKAFNVRFDEL-----NVYDIKFLYGCSDPTLAVLYKDS-----------DGRHVKTYELNLRKEFVKGPWS-NNVDNGASMLIPVPSPIGGVLVIGEEFIVYMSGD---NFVAIAPLTAEQ------------STIVCYGRVDLQGSRYLLGDEDGMLFKLLLSHTG-ETVSGLKVEYLGETSIASSINYLDNGVLFVGSRFGDSQLIKLNTEPDV--------------------------------------------------------GS-YVVILETFVNLGPIVDMCVVDL---------DRQGQGQIVTCSGAFKDGSLRIIRNGIGIDELASIDLPGIKGMWSLKSM-------------------------VDENYDNYLVLSFISETRVLNISEEVEETEDPGFSTDEQTIFCSTINGNQ-LVQVTSNSIRLVSSAGLRSEWRPPGKITIGVVSANASQVVVAGGGLALFYLEIEDGGLREVSHEFACLLGDAPNKSRLLAVGLWSDISMILTFLPDLILITHEQLSGEIIPRSILLTTFEGDVALGDGALLYFVLDINTGQLSDRKKVTLGTQPISLRTFSSKSRTAVFALSDRPTV-IYS-SNGKLVYSPLSLKEVNHMCPFNSDAYPDSLASANGGALTIGTIDEIQKHIRTVPLGESPRRESLTFGLSNRIESSAEY-Y-----GEEYEVSFLRVLDQNTFEVLSSHEFERNETALSIIS-----------CKFTDDNTYYVVVYNGRIIVFEFEELNSLELVAETVVKGAVYALVEFNGKLLKGDEIAV | |
| lcl|cons | 83.34 | |
ILL-----VEPNGLQPITSVPFRPPSDKDYLFVATDSYRYFILEWDEESVTRAVSDRSGRPPKGRVIGLHLYQ--GLFKVIPIDSDGGSLLKAFNVRFDELNVYDIKFGCSDPTLDGRHVKTYELKEFVKGPWSNNGASMLIPVPSPIGGVLVIGENFVAIAPLEQSTIV---CYGRVDLQGSRYVGSYVVILETFV-NLGPIVDMCVVDLDRQGQGQIV-----TCSGAF--KDGSLRIIRNGIGIDELASKGMWSLKSMVYDNYLVLSFIS--------------------ETRVLNISEE-VE----------------ETEDPGFSTDETIFCSTINGNQ-LVQVTSNSIRLVSSAEWRPPGVSANASQVVVAGGGLFYLEIEDGG--LREVSHKE--------------FEYEVAC------------LDISPLGDASRLLAVGL-----WSDISMILTFLPDLILIT--HEQLSGEIIPRSILLTTFEGDIHYLLVALGDGALGQLSDVTLGTQPISLRTFSSKSRTAVFALSDRPTVIYSSNGKLSPLSLKEVNHMCPFNSDAYPDSLASANG-GALTIGTIDEIQKLHIRRICYQESSLTFGVLSNRIYGEEYEVSFLRVLDQNFEVLSHEFETALSIISCKFTDTYYVVGPVNGRIIVFEFEELNSLE---LVAE----TVVKGAVYALVEFNGKL--LAGINQSVRLYEWTTEELRIEC--NISNPIIALDKGDEIAVGDLMRSI---------------------------TLLQYKGDEGNFEEVA-RDYNPNLGAENSGNLFTVRKDSDA----------TTDEERQILEEHLGSLVMQ-LGDSMPEKVLFGTVNGSIGIIVSLPQDWYDFLEELQRRIRKVIKSVDYRSFEFEKRTSPVDGDLIESFLD--LSRSKMREIVRGLEHTES---LASVQELLKIVEELTRLH-------------------------- | |
| COG2706 | 75.08 | |
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKQTVYIGTYT-KRESQGIYVFNLDKTGELSLLQLVAELGNP-----------------------------------------------------------------------------------------TYLAVN-----------------------PDQRHLYVVNEPGE-------EGGVAAYDPDGRLNRQTLPGSPPYVSVDEDGRFVFVANHSGSVSVYPLQADGSLQPVVQVVKHTGSGTPDGYLVVPDLGTDRIFLYDLD---DGKLTP------------------------------------------------ADP-------------AEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEE------LQTIDTLPEDFGTNWAAAIHISPDGRFLYASNHDSIAVFSVDPD-------GGKLELVGITEGQFPRDFNINPSGRF--LIAANQKSDNITV---FE-RDKETTLLGRYAVVPEPVCVKFLA--------------------------------- | |
| lcl|cons | 67.24 | |
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSSDESPKDLEELQSLKAVFGDLERLEDALLFSVDQGLVNDDEDSQE-------SEVDNESKGQVIPSEKPAAWEDEDDLVVADMTNRLRKLRTT---------------------------ENEGLLSGKEYKGRLREQFQKRYPVP----------KWAKKASGKDSEDD-EEEGSLDDLLKTTVGYI----DSRSKLLPP---------GTLNIKRLKDANAAHPSHGGITSV-QFHPTAPLLLVAGL--DGTLRIFQVDGKVNKLQSIHLEKFP-------------------------------------------------------------IQKAEFAPNGH-------------SVIFTSGRRKYDLEAKVTKLKPPYGVERFEVSHDSNFIAIAGNNGHIHLLHAKTKELI----------TSFKIEGVVSDFTFSSDSKELLASGGTG------EVY-----VWNLRSCLHRFVD--DGSVHGTS------------------------LCISLNGSYLATGSDSGIVNIYDGNSCKPIKTVDNLTTAITSLQFNHDAQ------------------------------------ILA--------I----AS----RVKKNALRLVHVPSCTVFSNFPTS----N-----------TKVGHVTCMAFSPNSGYLAVG-----------NEAGRVHLFKLHH--Y------------------- | |
| lcl|cons | 63.79 | |
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MK-QKDLKRAYNTVFAQAISPSKQ-YLFAGNLFGDIAVLSLKSLDSGSAEP------------------------------------------------PGKLKIVPEQAHD-----GPIYYLAFHDD--------------FLLSGGDGLVELATKRL-WEVKIPMQVDAVEVPEINAMWLDPS---------------------------------------ENS-----------------------ILFAG--GDGV-IYQVDLEIQREYRGH----------TDYVHSVRNANGQILSGAEDGTVRVWDTKTQKHVS---MIEPYKNPNLLWGKWI-GALAV------------------------------------------------------------------------------NEDWL-VCGGGPKLSLWHLRSSESVFPIPARV--H--LVDFV-----------------------DDCVLIGGEGNSWTSPIKFISFSNKLHILKDFRFLDS------KIEM-------------------------------------------------------------------------------------------------- | |
| d1wp5a | 53.65 | |
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVASEDVIVTVTKDGYVKRTSLRSYAASNQDFAMKDTDRLLAMLEMN-----TKDVLLLFTNKGNYLYCPVHPDIRWKDLGQHIANIIDDQVVDVHLTDGMNELFLVTHNGYALWFDESEVS----------------------------------------------IVGVR---AAGVKGMNLKEGDYIVSGQLI----------------TSKDESIVVATQRGAVKKMKLTEFEKA----------TRAKRGVVILRELKAN------------------------PHRISGFVVAQDSDTIYLQTEK-------------------------SFIETIKVGDIRFSDYSNGSFVLDEEENGRVISVWKVE-------AED--------KTEK--LAAALE---HHHH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |
| pfam0317 | 51.66 | |
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASCIRLVDPI-TWEVIDTLELEENEAVLSVKSVNL---------------------EDSEKGRKEYLVVGTAGRIYVFEIIEKLKLVHKTEV--KGAVTALCEF-QGR-LLAGQGQKLRVYDLGKLLPKAFLDTPTYVVSLKVFGNRIIVGDLMKSVTFLGYDEEPYR-----LILF--ARDTQPRWVAAEFLVDY-----------------------------------------------------------------------------D-TILGADKFGNLHVLRYDPEAPLLHRAEFHLGDIVTSFQ-----------------KGSLVP--------SLGESTSSPQILYGLDGSIGLLVPFISEE------EYRRLQHLQQQLRDELP--------HLCG---------LDPRAFRSYY------SR--S-EPVKNV--------------IDGDLERFLD------------- |
PSI-BLAST run over PDB70 database (4 iterations)
| 1........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480.......490.......500.......510.......520.......530.......540.......550.......560.......570.......580.......590.......600.......610.......620.......630.......640.......650.......660.......670.......680.......690.......700.......710.......720.......730.......740.......750.......760.......770.......780.......790.......800.......810.......820.......830.......840.......850.......860.......870.......880.......890.......900.......910.......920.......930.......940.......950.......960.......970.......980....... | ||||
| pdbid | score | model | MYAVYKQAHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGKAHREKLELAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVVFAVNSLLYLNQSVPPYGVALNSLTTGTTAFPLRTQEGVRITLDCAQATFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASAVREAADKEEPPSKKKRVDATAGWSAAGKSVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSILNIGPCANAAVGEPAFLSEEFQNSPEPDLEIVVCSGHGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEEEDNPKGEGTEQEPSTTPEADDDGRRHGFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQLHFIPVDLGAPIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPLHHQSKVITLCLYRDLSGMFTTESRLGGARDELGGRSGPEAEGLGSETSPTVDDEEEMLYGDSGSLFSPSKEEARRSSQPPADRDPAPFRAEPTHWCLLVRENGTMEIYQLPDWRLVFLVKNFPVGQRVLVDSSFGQPTTQGEARREEATRQGELPLVKEVLLVALGSRQSRPYLLVHVDQELLIYEAFPHDSQLGQGNLKVRFKKVPHNINFREKKPKPSKKKAEGGGAEEGAGARGRVARFRYFEDIYGYSGVFICGPSPHWLLVTGRGALRLHPMAIDGPVDSFAPFHNVNCPRGFLYF | |
| 3ei3 A | 0 | |
-YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVT------------------AEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAH---GNVQDRIGRPSETGIIGIDPECRMIGLRLYDGLFKVIPLDRDNK----------------------ELKAFNIRLLHVIDVKFLYGCQAPTICFVYQDPQ---GR-HVKTYEVSLREKEFNKGP------WKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGD-----------KYLAIAPPIIKQS----TIVCHNRVDPNGSRYLLGDMEGRLFMLLLQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLN--------------------------VD------------------------SNEQGSYVVAMETFT------NLGPIVDMCVVD---LERQGQG------QLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLW----PLRSD---------------PNRETDDT------LVLSFVGQTRVLMNGEEVEETELMGFVDDQQTFFCGNVA-HQQLIQITSASVRLV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |
| 1wdu A | 0.648668 | |
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PPYRVLQANLKKLATAELAIEAATRKAAIALIQEPYVGGAKSMKGFRGVRVFQSTAQGDGTVKAAIAVFDHDLDVIQYPQLTTNNIVVVGIRTRAWEITLVSYYFEPDKPIESYLEQIKRVERKMGPKRLIDANAKSTWWGSKEDDARGDQL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |
| 2r14 A | 0.699254 | |
-------------------------------ISPTARGYVYTPGIWTDAQEAGWKGVVEAVHAKGGRIALQLWHVGRV-SHELVQPDGQQPVAPSALKAEGAECFVEFEDGTAGL---------HPTSTPRALETDEIP--GIVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |
| 3eaf A | 0.905666 | |
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VIAIIGWGTADTEKLSDQVDTDKI-------TYISASYSAKLLVKPFNFYPAPDACSGLAFLASEFGQGKLALAYDSKVAYSRSPIGAIKKAAPSLGLQVVGDYDLP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |
| 2i6t A | 3.77235 | |
----------------------------NVLKAQTSGKEVWVIGEQGE-----DKVLTWSGQEEVVSHTSQVQLSNR--AMELLRVKGQRSWSVGLSVADMVDSIVNNKKKVHSVSALAKGYYD-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |
| 3ecq A | 4.27529 | |
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSYDDERTVVSVKTDNQEGVKTEDTPAEKETGPEVDDSKVTYDT-IQSKVLKAVIDQAFPRVKEYSLNGHTLPGQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |
| 3fgv A | 4.38366 | |
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTESDRDQEASMREVVIVKSTPQRGKFNAFAELVGKLVSETRDFPGCLGAYLMLAPERNEQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |
| 2gkg A | 5.91954 | |
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SDTALSATLRSALEGRGFTVDETTDGKGSVEQIRRDRPDLVVLAVDLSAGQNGYLICGKLKKDDDLKNVPVIIGNPDGFAQHRKLKAHADEYVAKPVDADQLVERAGALIGFPE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |
| 3rqw A | 6.17172 | |
-------------------------------------------------------------------------------------------------------------------------------------------RLMLFPDGRVIGSFSNDMDFRLFPFDRQQFVLELEPFSYNNQQLRFSDIQVIDNEEIDEWWIHISDIRYDH-------LSSVQPNQNEFSRITVRIDAV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
PSI-BLAST run over CullPDB database (4 iterations)
| 1........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480.......490.......500.......510.......520.......530.......540.......550.......560.......570.......580.......590.......600.......610.......620.......630.......640.......650.......660.......670.......680.......690.......700.......710.......720.......730.......740.......750.......760.......770.......780.......790.......800.......810.......820.......830.......840.......850.......860.......870.......880.......890.......900.......910.......920.......930.......940.......950.......960.......970.......980....... | ||||
| pdbid | score | model | MYAVYKQAHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGKAHREKLELAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVVFAVNSLLYLNQSVPPYGVALNSLTTGTTAFPLRTQEGVRITLDCAQATFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASAVREAADKEEPPSKKKRVDATAGWSAAGKSVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSILNIGPCANAAVGEPAFLSEEFQNSPEPDLEIVVCSGHGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEEEDNPKGEGTEQEPSTTPEADDDGRRHGFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQLHFIPVDLGAPIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPLHHQSKVITLCLYRDLSGMFTTESRLGGARDELGGRSGPEAEGLGSETSPTVDDEEEMLYGDSGSLFSPSKEEARRSSQPPADRDPAPFRAEPTHWCLLVRENGTMEIYQLPDWRLVFLVKNFPVGQRVLVDSSFGQPTTQGEARREEATRQGELPLVKEVLLVALGSRQSRPYLLVHVDQELLIYEAFPHDSQLGQGNLKVRFKKVPHNINFREKKPKPSKKKAEGGGAEEGAGARGRVARFRYFEDIYGYSGVFICGPSPHWLLVTGRGALRLHPMAIDGPVDSFAPFHNVNCPRGFLYF | |
| 3ei3 A | 8.07873e-11 | |
-YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTA------------------EGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAH---GNVQDRIGRPSETGIIGIDPECRMIGLRLYDGLFKVIPLDRDNK----------------------ELKAFNIRLLHVIDVKFLYGCQAPTICFVYQDPQ---GR-HVKTYEVSLREKEFNKGP------WKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGD-----------KYLAIAPPIIKQS----TIVCHNRVDPNGSRYLLGDMEGRLFMLLLQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLV--------------------------KLNVD------------------------SNEQGSYVVAMETFT------NLGPIVDMCVVD---LERQGQG------QLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLW----PLRSD---------------PNRETDDT------LVLSFVGQTRVLMNGEEVEETELMGFVDDQQTFFCGNVA-HQQLIQITSASVRLV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |
| 3kzs A | 0.487035 | |
-----------------------------------------------------------------------YNYTGRPMEVDFSKISGAKKNAWWYTTKDGKLEYIEFDNGVHKFQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |
| 3tfj A | 1.45297 | |
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KHLIARSGWSKQGG---------YEVYVENTQSGQKLYDHLFEVGKE-FNVGPCPNLIERESALLSNDFDNNDNP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |
| 3cgx A | 2.02863 | |
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LEVLQLPDWNDVDTVWDLNVLYRTNKNSSFRRSSTYALLRENDAIRQYDIDL------------------------------------------------------------------------------------------------------------------------------------------------- | |
| 4dej A | 2.22363 | |
------------------------------VARGTSRLMMYRIERDAEKIQKNDAQARQELKEGILSLAPIFAFMSEEFSLVDCYLA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |
| 3ecq A | 4.95374 | |
------------------------------------QVVDNQLHFDVTKIVNHNQVTPGQKIDDERKLLSSISFLGNALVSVSSDQTGAKFDGATMS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |
| 2reo A | 5.25169 | |
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILATYPKSGT---TWMHEILDMILNDGKCKRATLDRHAFLELKFPHKEKPDLEFVL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
PSI-BLAST run over CullPDB database (4 iterations)
| 1........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480.......490.......500.......510.......520.......530.......540.......550.......560.......570.......580.......590.......600.......610.......620.......630.......640.......650.......660.......670.......680.......690.......700.......710.......720.......730.......740.......750.......760.......770.......780.......790.......800.......810.......820.......830.......840.......850.......860.......870.......880.......890.......900.......910.......920.......930.......940.......950.......960.......970.......980....... | ||||
| pdbid | score | model | MYAVYKQAHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGKAHREKLELAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVVFAVNSLLYLNQSVPPYGVALNSLTTGTTAFPLRTQEGVRITLDCAQATFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASAVREAADKEEPPSKKKRVDATAGWSAAGKSVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSILNIGPCANAAVGEPAFLSEEFQNSPEPDLEIVVCSGHGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEEEDNPKGEGTEQEPSTTPEADDDGRRHGFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQLHFIPVDLGAPIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPLHHQSKVITLCLYRDLSGMFTTESRLGGARDELGGRSGPEAEGLGSETSPTVDDEEEMLYGDSGSLFSPSKEEARRSSQPPADRDPAPFRAEPTHWCLLVRENGTMEIYQLPDWRLVFLVKNFPVGQRVLVDSSFGQPTTQGEARREEATRQGELPLVKEVLLVALGSRQSRPYLLVHVDQELLIYEAFPHDSQLGQGNLKVRFKKVPHNINFREKKPKPSKKKAEGGGAEEGAGARGRVARFRYFEDIYGYSGVFICGPSPHWLLVTGRGALRLHPMAIDGPVDSFAPFHNVNCPRGFLYF |
FFAS - remote method
| 1........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480.......490.......500.......510.......520.......530.......540.......550.......560.......570.......580.......590.......600.......610.......620.......630.......640.......650.......660.......670.......680.......690.......700.......710.......720.......730.......740.......750.......760.......770.......780.......790.......800.......810.......820.......830.......840.......850.......860.......870.......880.......890.......900.......910.......920.......930.......940.......950.......960.......970.......980....... | ||||
| pdbid | score | model | MYAVYKQAHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGKAHREKLELAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVVFAVNSLLYLNQSVPPYGVALNSLTTGTTAFPLRTQEGVRITLDCAQATFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASAVREAADKEEPPSKKKRVDATAGWSAAGKSVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSILNIGPCANAAVGEPAFLSEEFQNSPEPDLEIVVCSGHGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEEEDNPKGEGTEQEPSTTPEADDDGRRHGFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQLHFIPVDLGAPIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPLHHQSKVITLCLYRDLSGMFTTESRLGGARDELGGRSGPEAEGLGSETSPTVDDEEEMLYGDSGSLFSPSKEEARRSSQPPADRDPAPFRAEPTHWCLLVRENGTMEIYQLPDWRLVFLVKNFPVGQRVLVDSSFGQPTTQGEARREEATRQGELPLVKEVLLVALGSRQSRPYLLVHVDQELLIYEAFPHDSQLGQGNLKVRFKKVPHNINFREKKPKPSKKKAEGGGAEEGAGARGRVARFRYFEDIYGYSGVFICGPSPHWLLVTGRGALRLHPMAIDGPVDSFAPFHNVNCPRGFLYF | |
| 4a08 A | -109 | |
SYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAE------------------GLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGN--VQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFN--------------------IRLEELHVIDVKFLYGCQAPTICFVYQDPQGR-----------HVKTYAVSLREKEFKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQS---------------TIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNE--------------------------------------------------------QGSYVVAMETFTNLGPIVDMCVVDLE---------RQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSD-------------------------PNRETDDTLVLSFVGQTRVLMLNGEVEETELMGFVDDQQTFFCGNVAHQQ-LIQITSASVRLVSQEPKVSEWKEPQAKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVACLDGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSS--NHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKHIRTVPLYESPRK-ICYQEVSQCFGVLSS-APHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF------NGKLLA | |
| 2oaj A | -16.3 | |
------------GMSSKPIAAAFDFTQNLLAITVTGEVHIYG--------------------QQQVEVVIKLEDRSAIKEMR------VKGIYLVVINAKDTVYV--LSLYSQKVLTT-------------VFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYV------TLTYS------------VENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSSKVYWMCENNPEYTSLLISGDNQSLTMIDLGYTPRYSITSYEFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNGGVRTKRQKLPAEYGTAFIT----SNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDV---GFMPSTAVHANKGKTSAINNS----NIGFVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMSSILMVCGTDMGEVITYKILPASGGKFDVQL-MDITNVTSKGPIHKIDAFSKETK--------SSCLATIPKMQNLSKGLCIPGIVLITGFDDIRLITLGKSKSTHKGFKYPATGLSYISTVEKNNDRKNLTVIITLEINGHLRVFTIPDFKEQMSE-------HIPFPIAAKYITESSVLRNGDIAIRVSEFQASLFSTVKEQDTLAPVSDTLYINGIRIPYRPQVNSLQWARGTVYCTPAQL--NELLGGVNRPASKYKESIIAEGSFSERSSDDN------------------------------------------------------------- | |
| 3ott A | -10.6 | |
KVNYQQFDNIYLGAEASVVSCFLQDSEGLIWIGSNKGLFSY---DGYSTQQHFTYGENNNTRIYCGVIIDNTYLYGTDNGILVYNYRADQGDTLWLGALNG---LYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYVGTYNGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTR-QCVWIGTEGYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNTDNGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWLGTDYGISLFRDSKGFYWFGGANGLIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWIATDGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYNNKGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGFHGGVMRINPKDESQQSISFGSFSNNEILSMTCVK--------------NSIWVSTTNGLWIIDRKTMDARQQNMTNKRFTSLLFDPKEDCVYLGGADGFGISHSNLEATYQPERPILLTALYI------NNQLVSPRTRDDVPNIRYTNSIKLKYDQNNLSFELSDLPKEWNFLKSNINRITYSNLSYGNYQLIISKLERDGQPSNRPHIL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |
| 1pgu A | -9.47 | |
----------PSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVV------------------QFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISD----ISWDFEGRRLCVVG-DNFGVFISWDSGNSLGE------------------------------------VSGHSQRINACHLKQSRPMRSMTVGDDGSVVF-------QGPPFKFSASDRTHHKQGSFVRDVESPDSGEFVITDRKISCFDGKSGEFLKYIEDDQEPVQGG-------------IFALSWLDSQKFATVGADATIRV---DVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTIS----------------------------------GHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKAHKDGVNNLLWETPSTLVSSG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |
| 1sqj A | -8.98 | |
----------------------AHPKTKDLLYARTDIGGAYRWDAGTSKIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAAFYVSEDRGQ----SFTIYESPFPM-----------GANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPER---------GTIYASATAPQGMYVTHDGGVSWEPVAGQPSSWLNRTTGAFP-DKKPASIAPQPMKVALTPNFLYVTYADYPGPWGVTFGEV-WRQNRTSGAWDDITPRVGNSSPAPYNNQTFPAGGFCGLSVDATNPNRLVVIPALDSIYL---STDAGATWKDVTLEGNWGHPTNAARYKDGTPVPWLDFNNGPQ---GLTKFGWWMSAVLIDPFNPEHLMYGTGATIWATDTLSRVEKDWAPSWYLQIDGIEENAILSLRSPKSGAALLSGIGDISGMKHDMFGAPQFSNLDSIDAAGNFPNVVVRADSACARGAYATDGGDA---------------WT-------IFPTCPPGMNASHYQGSTIAVDASGSQIVWSTKLDEQASGPWYSHDYGKTWSVPAGDLKAQTANVLSDKVQDGTFYATDGGKFFVSTDGGKSYAAKGAGLMPAVNPWVAGDVWVPVPEGGL--FHSTDFGAS------------------------FTRVGTANATLVSVGAPKSKSDGKKASAPSAVFIWGTDKPGSDIGLYRSDDNGSTWTRVNDQEHNYSGPTMIEA---DPKVYGRVYLGTNGRGIVNKKSNEEKSTAKCAN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |
| 1nr0 A | -8.91 | |
----------PRTARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTS-YYCASGDVHGNVRIWDTTQTTHILKTTI-----SGPVKDISWDSESKRIAAVGEG------------RERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKST--------------FGEHTKFVHSVRYNPDGS---LFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASA----DKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFIRYGHNKAITALSSSADGKTLFSANRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLA------------------SADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTN--------------------------------------SWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGA------AMSSVNSVIWLNETTIVSAGQDSNIKFWNVP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |
| 3mkq A | -8.56 | |
-----------------------------------------------------------------MKLDIKKTFSNRSDRVKGIDFHPTE-PWVLTTLYSGRVEI--WNYETQVEVRSIQVT------------ETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWE-FEGHEHFVMCVAFNPKDPS--TFASGCLDRTVKVWSLGQSTPNFTLTTGQER---GVNYVDYYPLPDKPYMITADLTIKIWDYQTKSCVATLEGHMSNVS-----------------FAVFHPTLPIIISGSEDGTLKI--NSSTYKVEKTLN----VGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSL----------AHSP----------------------NGRFVTVVG------------------------DGEYVIYTALAWRNKAFGKCQDFV---------------GPDSNSYALIDETGQIKYYKNFKEVTSWSVPMHSAIDRLFSGALLGVK-----SDGFVYFFDWDNGTLVRRIDVNAKDVIWSDNGELVMIVNTNSNGDEASG-----YTLLFNKDAYLEAANNGNIDDSEGVDEAFDVLYELSESITSGK-----------------------VGDVFIFTTATNRLNYFVGGKTYNLAHYTKEMYLLGYLARDNKVYLADREVHVYGYEISLEVLEFQT-------LTLRGEIEEAIENVLPNVEGKDSLTKIARFLEYEEALNISPDQDQKF-----ELALKVGQLTLARDLLTDESAEMKWRALGDASLQRKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKFNLAFNAYWIAGDIQGAKDLLIKSQRFSEAAFLG------------- | |
| 3v9f A | -8.53 | |
VKHFVHDPQNPNSLPGNDVRCIYKDTNGNIWIGTSKGLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQ-----------------LKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLG--------NISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTAGVFVIDLASKKVIHHYDTSNSQLLENFVRS---------------------IAQDSEGRFWIVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATGEGLVCFPSARNFDPNTHIRAISEDKNGNIWASTNTGISCYITSKKCFYTYDHSNNIPQGSFISGCVTKDHNGLIYFGSINGLCFFNPITKVRIPGRLTSREKNETAIPISEGEIELTHEQNSFNLNVQDYSLANQVEYAYMLKGLENSWYTINEQNSVTFRNIPPGKYEFLVKARLHNQDWSEDTTSLRIH---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |
| 2yh3 A | -8.41 | |
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LADNVVYAADRAGLVKALNADDGKSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGADMPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNG----NLTALDLRSGQIMWKRELGSVNDFIVDGN-----------------------RIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLYNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEAADGKLLIQAKDGTVYSITRAD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |
| 1ri6 A | -8.17 | |
------------------------SLKQTVYIASSQQIHVWNLNHE-----------------GALTLTQVVDVPGQVQPMV---VSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAA-----------ESALPGSLTHISTDHQGQFVFVGSYAGNVSVTRLEDGLPVGVVDVVEGLDGCHSAN---------------------------SPDNRTLWVPALKQD----------RICLFTVSDDGHLVAQDPAEVTTVEGAGRHMVFHPNEQYAYCVNESSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHIT-------PDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHIVYEIVGEQGLLHEKGRYAVGQG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
mGenThreader
| 1........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480.......490.......500.......510.......520.......530.......540.......550.......560.......570.......580.......590.......600.......610.......620.......630.......640.......650.......660.......670.......680.......690.......700.......710.......720.......730.......740.......750.......760.......770.......780.......790.......800.......810.......820.......830.......840.......850.......860.......870.......880.......890.......900.......910.......920.......930.......940.......950.......960.......970.......980....... | ||||
| pdbid | score | model | MYAVYKQAHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGKAHREKLELAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVVFAVNSLLYLNQSVPPYGVALNSLTTGTTAFPLRTQEGVRITLDCAQATFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASAVREAADKEEPPSKKKRVDATAGWSAAGKSVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSILNIGPCANAAVGEPAFLSEEFQNSPEPDLEIVVCSGHGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEEEDNPKGEGTEQEPSTTPEADDDGRRHGFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQLHFIPVDLGAPIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPLHHQSKVITLCLYRDLSGMFTTESRLGGARDELGGRSGPEAEGLGSETSPTVDDEEEMLYGDSGSLFSPSKEEARRSSQPPADRDPAPFRAEPTHWCLLVRENGTMEIYQLPDWRLVFLVKNFPVGQRVLVDSSFGQPTTQGEARREEATRQGELPLVKEVLLVALGSRQSRPYLLVHVDQELLIYEAFPHDSQLGQGNLKVRFKKVPHNINFREKKPKPSKKKAEGGGAEEGAGARGRVARFRYFEDIYGYSGVFICGPSPHWLLVTGRGALRLHPMAIDGPVDSFAPFHNVNCPRGFLYF | |
| 3ei3 A | 3e-31 | |
MYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTA------------------EGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQGESIDIITRAHGNVQD---RIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDN---------------KELKAFNIRLEELH-----VIDVKFLYGCQAPTICFVYQDPQ-----------GRHVKTYEVSLREKFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKY-LAIAPPIIKQST--------------IVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEV-TLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGS--------------------------------------------------------YVVAMETFTNLGPIVDMCVVDL---------ERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLR-------------------------SDPNRETDDTLVLSFVGQTRVLMLGEEVEETELMGFVDDQQTFFCGNVAHQ-QLIQITSASVRLVSQEPKVSEWKEPQAKNISVASCNSSQVVVAVG-RALYYLQIHPQEMEHEVACLDITPGDSNGLSPLCAIGLW----------------------------------------------------------------------------------------TDISARILKLPSFELLHKEML------------------------------GGEIIPRSILMTTFE---SSHYLLCALGDGALFYFGLNIETGL-----LSDRKKVTL---------------------------GTQPTVLRTFRSL-STTNVFACSDRP-TVIYSSNHKLVFSNVNLK-EVNYMCPLNSDGYPDSLALA | |
| 2oaj A | 6e-12 | |
SQKVLTTVFVPGK----ITSIDTDASLDWMLIGLQNGMIVYDIDRDLDNLQKSSFFPAARLSPIV-----SIQWNPRDIGTVLISYEYV---------------TLTYSLVEN--EIKQSFIYELPPFAPGGDFSEKTNQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDY-----IRDSSTNAAKISKVYWMCENNPESLLISHKSISRGDNQ------SLTMIDLGYTPRYS-ITSYEGMKNYYANPKQMKIFPLPTNPIVNILPILILLILGNGEIETMLYPSDKASLFPQNLSWLRPLATTSMAASVPNAQNKDYLL--KGGVTAFITGHSNG--SVRIYDASHGDIQDNASDKISFETLELAVSIETGDVVLFKYEVN--------------------------------QFFRRFSLNNTNGVLVDVRDRAP-TGVRQGFMPSTAVHANKGKTSAINNSNIG--------------FVGIAYAAG---SLMLIDRR-GPAIIYMENIREISGEFVIMEY------------------------GDDGYSSILMVCGTDMGYKILPASGDITNVTSKG---PIHKIDAFSKETKSIVLITGFDDIRLITGKSKSTHKGFK--YPLSYISTVEKVIITLEINGHLRVFTI---PDFKEQMSEHIPFPIAVSEFQASLFSTVKEQDTLAPVSDTLYINGIRIPYRPQVNSLQWARGTVYCTPAQLNELLGGVNRPASKYKESIIAE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |
| 1pgu A | 4e-11 | |
-SSILKEIIPPTQRNFTTHLSYDPTT-NAIAYPCGKSAFVRCL---------DDGDSKVTGHGSSVVTTVKFS-------------PIKGSQYLCSGDESGKVIVWTFDKESNSVEVNVKSEFQVL-------------------AGPISDISWDGRRLCVVGEGRDN------------------FGVFISWDSGN-------SLGEVSGHSQRINACHLKQSRPM--RSMTVGDDGSVVFYQG---PPFKFSASDRTHHKQGSFRDVEFSPDSGEFVITVGSDISCFDGKSGEFLKYIEDDQEPVQGG-------------IFALSWLDSQKFATVGADA--TIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELKTISGHNKGITALTVNPYDGRWSSSSMHQDHSNL----------------------------------IVSLDNSKAQEYSSISWDDNGITKHEFG---SQPKVASANNDGNDDDLLILQS-FTGDIIKSVRLNSP--GSAVSLS----------------------------QNYVAVGLEEGNTIQVFKL-SDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGILLYDLQSREVKTSAFRTSKINAISWKEDLVATGSLDTNIFIYSVKRPMKKDGVNNLLWETPSADA-----CIKRWNVV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |
| 3v9f A | 5e-11 | |
-------------------------------------------------------------------------------------------------------------P--YLIQRLG--------IEQGLSNN----YITQDKQGF--LWFATEEGLNKFDGTR----FITYYKEEQSSSVQSITGNELNEVYTDPVQPVIWIATQRAG------LNAYNYETQ------------SFSVYQYNPEDP--------QSLITNDVTHITSSVQAGKGLWVCTYYIEYLDIATGKFTHYNKS-----TVPALPSEQ-------TWTATEAEDGKLYIGHVEGDVRCIYKDTNGNIWIGTALFNANTESSYIFSIKQLKDNKLWIATELNGIMILDL--------------------------------------------QQNFEFIREGDNNYSLSNASARYIFQDSFNNWGGGINFISNAPPTF-HTWSQMNESSLSSVCDDGQGKGGGINVFENG---KRVAIYNLLSNSVLCSLKD-----------------------------SEGNLWFGTYLGNISYYNTRLKKFQIIELE-KNELLDVRVFYEDKNKKIWIGTHAGVFVIDLASKIHHYDTSLENFVRSIAQDSERFWIGTFGGGVGIYT------PDMQLVRKFNQYEGFCSNTIN--QIYRSSKGQMWLATGPSARNFDYQRKEGLPNTHIDKNTNTGTSKKCFYTYDHSNNIPQG------------------------SSGCVTKDHNGLIYFGSIN--GLCFFNPDIAINSPQIPPVIPGRLTSREKNET---AIPISEG---EIELT--HEQNSLENSWYTINEQEFLVKARLHNQDWSEDTTSLRIHINP---------------------------------------------------------------------------------------------- | |
| 3v9f A | 2e-10 | |
NDKSVKHFVHPGNDVRCIYKD----TNGNIWIGTSKGLALFNANTETFTNLSSY-----------------------IFSIKQL-----KDNKLWIATELNGIMILDLQQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |
| 4a7k A | 2e-10 | |
NWTMRTIGHSP-GMHRLKAGHFTRTDRVQVVAVPIVDVIIFTA-----------PDDPRSEQLWQRDVVGTRHLVHEVAIVPAAETDGEMRDQIILAGRD-GVDCLWYDGAR-----WQRHLVGTGLPEERGDPYWGAGSAAVGRVGDCSAEAFHGNTVSVYTKPAGSPTGIVRAEFGPLNGKHTGSIHQVVCADIDEDEFLVAMMGADPPDFQRTGVWCYKLVDRTNMKFSKTKVSSRIATANFHSQGSEVDIATISYSVPFES--------PNPSINVFLSTGILAERLD-EEVMLRVVR--------AGSTRFKTEMEFLDVATLVVLPPFARLDVERNVMAGTVCWADENGKHERV----PATRPFGCESMIVSADYLESGEEGAILVLYKPSSTSGRPPAHNLFPAYVPDSVRAPWVRCADRPWAHGRFKDLDDDSAAWTAGIGVSAGFHNHVEASFCEIHACIANGTGRGGMRWATVPDANFNPDSPNLEDTELIVVPDLRMNDTIAWLAGAGNPS-------PQAFDVWVAFEP--------------GFETFSTPPPPRVLEPGRYAIFGDPHQTASLALQK--------NDATDGTPVLALLDLDGG------PSNISHVPGTDMYEIAHAKTGS--LVCARWPPQRVAGTHSGLTSRWAVTKNTKG--QITFRLPEAPDHSAIDAIPVIVQGDLSAWSLVPA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |
| 3ije A | 5e-10 | |
SPAEYSG---PEGSYFAVDFFVPSASSRFLLVGAPKQVLKCDWSSTRRCQPIEFDATGNRKSHQWFGASVRSKQDKILACAPLYHWRTEMKQTCFLQDGT---------------KTVEYACRSQDIDADGQGFCQGGFSIDFTKADRVLLGGPWQGQLISDQVAEIVSKYDPNVYSIKYNNQ-------LATRTAQAILGYSVAVGDFNGDGIDDFVSGVPRAARTLGMVYIYDNMSSLYNFTGEQMAAYFGFSVAATDINGDDYAFIGAPGSDGKLQEVGQVSVSLQRASGDFQTTKLNGFEVFARFGS-------------AIAPLGDLDDIAIAAPYGKGIVYIFNGRSTGLNQILEGQWAARSMPPSMKGATDNGYLIVGAFGVDVITVNAGLEVYPS-------------------ILNQDNKTCSLPGTALKVSCFNVRFCLKADGKGVLPRKLNFQVELLLDQKGAIRRALFLYSRSPNMTISRGGLMQCEELIAYLRDESEF----RDKLTPTIFMEYRLDY------------RTAADTTGLQPNQFTPALDCGEDNVCKPKLEVSVDSDQKKIYI-----------------GDIVKAQNQGEG-----AYEAEL-IVSIPLQADFIGVVRNNERLSCAFKTRQVVCDLGNGTQLLAGLRFSVHQQSEDLQIQSSNLFDKVSPVVSHKVDLAVLAAIRGVSS-----------------------------PDHVFLPIPNW---------EHKENPETEEDVGP----VVQHIYELRNNGMLHLYKYNNNTLLYILHYDIDGPMNCTSDMEINPLRIKISSLDIHTLGCGVAQCLKIVCQVGRLDRG---------KSAILYKSLLWMNKENQNHSSFNVIEFPYKNLPIEDQPAPMPVPVWVI-------------------------------------------------------------------------- | |
| 1nr0 A | 3e-09 | |
----------------------------------------------------------------------------------------------------------------SEFSQTALFP------SLPRTARGTAVVLGNTPAGDKIQ-YCNGTSVYTVPVGSLTD------------------------------------TEIYTEHSHQTTVAKTSPSGY---YCASGDVHGNVRIWDTTQTT---------------HILKTTIPVFSGPVKDISWDRIAAVGEGRERHVFLFDTGTSNGNLTGQARA------MNSVDFKPSRPFRIISGSDDNT--VAIFEGPPFKFKSTFG---EHTKFVHSVRYNPDGSLFASTGGDGTIVLYNG-------------------VDGTKTGVFEDDSLKNVAHSGSSPDGTKIASASADNVATL--------KVEKTIPVGTRIEDIIWTKQA---------------LVSISANGELGSIDQVRYGHNKAITALSSSADGKTLFSADA---------------EGHISTGIFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKLGLAVSADGDIAVAACYKHIAIYSH-GKLTEVPISYN---SSCVALSNFVAVGGQDSKVHVYKLSGA----SVSEVKTIVHPAESNNGAFLVATDQSRKVIPYSVANNFAHTNSWTFHTAK-------------------------------------------------------VACVSWSPDNRLATGSLDNSVIVWNMNKPSDHP----------------------------------IIIKGAHAMSSVNSVIWLNETTIV--SAGQDSN-------IKFWNVPF--------------------------------------------------------------------------------------------- | |
| 1nr0 A | 6e-09 | |
GASEVKTIVHPAE---ITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTF----HTAKVACVSWS----------------PDNVRLATGSLDN--SVIVWNMNKP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |
| 3ott A | 7e-09 | |
-----------------------------------------------------------------------YQQFDNIYVVSCFLQDSEGL--IWIGSNKG---LFSYDGYS------TQQHFTYG-------ENNNTRCGVIIDNT--YLYMGTDNGILVYNYRAD------------------------------------RYEQPETDFPTDVRTMALQG-----DTLWLGALN-GLYTYQLQ-SRKLTSFDTRRNGLPNNTIYSIIRTKD-NQIYVGTYNGLCRYIPSNGKFEGIPLPVHSSQSNLFDTTRQCVWIGTEGYLFQYFPSTKSLALDGNGDLLAGTDYHNDTTPLQHIIHDSRNIQSLTNNIFADQEHNIWLGTDYGISLSRQFIPISQITGTYSLFRDSKGFTDP-------------------AGERHDAIWYRMGDKTYPLSHNRIRHIYED----------------------------KEQQLWIATDGYATRHYNIVDNTYNTNWTYYIFEDTAGQLWISTC-------LGGKLMQSTSGSVHNGLSGMDNEGNVWVLLYNNKGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGFHG--GVMRINPESQQSISFGSNEILSMTCVKNSIWVSTTNGLWIIDRLFDPKEDGADGFGISHSATYQPERPILLTALYINVS---------------------------------------------------------------PRTRDDVPNIRYTNSIKLKYDQNNLSFELSDLPYKFVYRLEGMDKEW------------------------------------NFLKSNIN----RITYSNQLIISKL-ERDGQPSNRPHILNIRILPHH-------------------------------------------------------------------------------------------- |
PCONS5
| 1........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480.......490.......500.......510.......520.......530.......540.......550.......560.......570.......580.......590.......600.......610.......620.......630.......640.......650.......660.......670.......680.......690.......700.......710.......720.......730.......740.......750.......760.......770.......780.......790.......800.......810.......820.......830.......840.......850.......860.......870.......880.......890.......900.......910.......920.......930.......940.......950.......960.......970.......980....... | ||||
| pdbid | score | model | MYAVYKQAHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGKAHREKLELAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVVFAVNSLLYLNQSVPPYGVALNSLTTGTTAFPLRTQEGVRITLDCAQATFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASAVREAADKEEPPSKKKRVDATAGWSAAGKSVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSILNIGPCANAAVGEPAFLSEEFQNSPEPDLEIVVCSGHGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEEEDNPKGEGTEQEPSTTPEADDDGRRHGFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQLHFIPVDLGAPIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPLHHQSKVITLCLYRDLSGMFTTESRLGGARDELGGRSGPEAEGLGSETSPTVDDEEEMLYGDSGSLFSPSKEEARRSSQPPADRDPAPFRAEPTHWCLLVRENGTMEIYQLPDWRLVFLVKNFPVGQRVLVDSSFGQPTTQGEARREEATRQGELPLVKEVLLVALGSRQSRPYLLVHVDQELLIYEAFPHDSQLGQGNLKVRFKKVPHNINFREKKPKPSKKKAEGGGAEEGAGARGRVARFRYFEDIYGYSGVFICGPSPHWLLVTGRGALRLHPMAIDGPVDSFAPFHNVNCPRGFLYF | |
| 1pgu A | 0.0 | |
EWSSS-SMH--QDHSNLVSLDN-SK-AQEYSSSWDDTLKVNGITKHEFGSQPK---VASANNDGTGDIIKSVRLNSPGSAVSLS------QNYVAVGLEGNTIQV--FKLSDLEVSF---DLKTP--------LRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWARTSKINAISWKPDLVATG-SLD-TNIFIYSIKALNAHKDGVNNLLWETPST---LVSS-GADACIKRWNVVLE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
b) disorder predictors:
DISOPRED2 result file
DISpro result file
DISPROT (VSL2) result file
GlobPlot result file
iPDA result file
IUPred long result file
IUPred short result file
Pdisorder result file
Poodle-l result file
Poodle-s result file
PrDOS result file
RONN result file
Spritz long result file
Spritz short result file
DisEMBL coils result file
DisEMBL hotloops result file
DisEMBL remark465 result file