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The results of your job 'Test_Template_Search' are ready.


Provided sequence:
GCCGAUAUAGCUCAGUUGGUAGAGCAGCGCAUUCGUAAUGCGAAGGUCGUAGGUUCGACUCCUAUUAUCGGCACCA

Results for the structures of the resolution better than 2.5 Å:


Rfam Family PDB ID Alingment Identity Similarity .aln file .pdb file
RF00005 1QTQ_B
>Target   GCCGAUAUAGCUCAGUUGGUAGAGCAGCGCAUUCGUAAUGCGAAGGUCGUAGGUUCGACUCCUAUUAUCGGCACCA
>1QTQ B   -GGGGUAUCGCCAAGC-GGUAAGGCACCGGAUUCUGAUUCCGGCAUUCCGAGGUUCGAAUCCUCGUACCCCAGCCA
0.592
0.651
RF00005 1QU2_T
>Target   GCCGAUAUAGCUCAGUUGGU-AGAGCAGCGCAUUCGUAAUGCGAAGGUCGUAGGUUCGACUCCUAUUAUCGGCACCA-
>1QU2 T   GGGCUUGUAGCUCAGGUGGUUAGAGCGCACCCCUGAUAAGGGUGAGGUCGGUGGUUCAAGUCCACUCAGGCCC---AC
0.579
0.625
RF00005 1FFY_T
>Target   GCCGAUAUAGCUCAGUUGGU-AGAGCAGCGCAUUCGUAAUGCGAAGGUCGUAGGUUCGACUCCUAUUAUCGGCACCA-
>1FFY T   GGGCUUGUAGCUCAGGUGGUUAGAGCGCACCCCUGAUAAGGGUGAGGUCGGUGGUUCAAGUCCACUCAGGCCC---AC
0.579
0.625
RF00005 1J1U_B
>Target   GCCGAUAUAGCUCAGU-UGGUAGAGCAGCGCAUUCGUAAUGCGAAGGUCGUAGGUUCGACUCCUAUUAUCGGCACCA
>1J1U B   CCGGCGGUAGUUCAGCCUGGUAGAACGGCGGACUGUAGAUCCGCAUGUCGCUGGUUCAAAUCCGGCCCGCCGG---A
0.566
0.645
RF00005 1EHZ_A
>Target   GCCGAUAUAGCUCAGUUGGUAGAGCAGCGCAUUCGUAAUGCGAAGGUCGUAGGUUCGACUCCUAUUAUCGGCACCA
>1EHZ A   GCGGAUUUALCUCAGDDGGGAGAGCRCCAGABU#AAYAP?UGGAG7UC?UGUGTPCG"UCCACAGAAUUCGCACCA
0.553
0.726
RF00005 1EVV_A
>Target   GCCGAUAUAGCUCAGUUGGUAGAGCAGCGCAUUCGUAAUGCGAAGGUCGUAGGUUCGACUCCUAUUAUCGGCACCA
>1EVV A   GCGGAUUUALCUCAGDDGGGAGAGCRCCAGABU#AAYAP?UGGAG7UC?UGUGTPCG"UCCACAGAAUUCGCACCA
0.553
0.726
RF00005 1U0B_A
>Target   GCCGAUAUAGCUCAGUUGGUAGAGCAGCGCAUUCGUAAUGCGAAGGUCGUAGGUUCGACUCCUAUUAUCGGCACCA
>1U0B A   GGCGCGUUAACAAAGC-GGUUAUGUAGCGGAUUGCAAAUCCGUCUA-GUCCGGUUCGACUCCGGAACGCGCCUCCA
0.539
0.586
RF00005 2DXI_D
>Target   GCCGAUAUAGCUCAGUUGGU-AGAGCAGCGCAUUCGUAAUGCGAAGGUCGUAGGUUCGACUCCUAUUAUCG---GCACCA
>2DXI D   GGCCCCAUCGUCUAGC-GGUUAGGACGCGGCCCUCUCAAGGCCGAAA-CGGGGGUUCGAUUCCCCCUGGGGUCACC---A
0.5
0.618
RF00005 2ZUE_B
>Target   GCCGAUAUAGCUCAGU-UGGU-AGAGCAGCGCAUUCGUAAUGCGAAGGUCGUAGGUUCGACUCCUAUUAUCGGCACCA
>2ZUE B   GGACCGGUAGCCUAGCCAGGACAGGGCGGCGGCCUCCUAAGCCGCAGGUCCGGGGUUCAAAUCCCCGCCGGUCC--GC
0.5
0.572
RF00005 1N78_D
>Target   GCCGAUAUAGCUCAGUUGGU-AGAGCAGCGCAUUCGUAAUGCGAAGGUCGUAGGUUCGACUCCUAUUAUCG---GCACCA
>1N78 D   GGCCCCAUCGUCUAGC-GGUUAGGACGCGGCCCUCUCAAGGCCGAAA-CGGGGGUUCGAUUCCCCCUGGGGUCACC---A
0.5
0.618
RF00005 1N77_D
>Target   GCCGAUAUAGCUCAGUUGGU-AGAGCAGCGCAUUCGUAAUGCGAAGGUCGUAGGUUCGACUCCUAUUAUCG---GCACCA
>1N77 D   GGCCCCAUCGUCUAGC-GGUUAGGACGCGGCCCUCUCAAGGCCGAAA-CGGGGGUUCGAUUCCCCCUGGGGUCACC---A
0.5
0.618
RF00005 2CV1_C
>Target   GCCGAUAUAGCUCAGUUGGU-AGAGCAGCGCAUUCGUAAUGCGAAGGUCGUAGGUUCGACUCCUAUUAUCG---GCACCA
>2CV1 C   GGCCCCAUCGUCUAGC-GGUUAGGACGCGGCCCUCUCAAGGCCGAAA-CGGGGGUUCGAUUCCCCCUGGGGUCACC---A
0.5
0.618
RF00005 2ZUF_B
>Target   GCCGAUAUAGCUCAGU-UGGU-AGAGCAGCGCAUUCGUAAUGCGAAGGUCGUAGGUUCGACUCCUAUUAUCGGCACCA
>2ZUF B   GGACCGGUAGCCUAGCCAGGACAGGGCGGCGGCCUCCUAAGCCGCAGGUCCGGGGUUCAAAUCCCCGCCGGUCC--GC
0.5
0.572
RF00005 2CV0_D
>Target   GCCGAUAUAGCUCAGUUGGU-AGAGCAGCGCAUUCGUAAUGCGAAGGUCGUAGGUUCGACUCCUAUUAUCG---GCACCA
>2CV0 D   GGCCCCAUCGUCUAGC-GGUUAGGACGCGGCCCUCUCAAGGCCGAAA-CGGGGGUUCGAUUCCCCCUGGGGUCACC---A
0.5
0.618
RF00005 2DXI_C
>Target   GCCGAUAUAGCUCAGUUGGU-AGAGCAGCGCAUUCGUAAUGCGAAGGUCGUAGGUUCGACUCCUAUUAUCG---GCACCA
>2DXI C   GGCCCCAUCGUCUAGC-GGUUAGGACGCGGCCCUCUCAAGGCCGAAA-CGGGGGUUCGAUUCCCCCUGGGGUCACC---A
0.5
0.618
RF00005 1N78_C
>Target   GCCGAUAUAGCUCAGUUGGU-AGAGCAGCGCAUUCGUAAUGCGAAGGUCGUAGGUUCGACUCCUAUUAUCG---GCACCA
>1N78 C   GGCCCCAUCGUCUAGC-GGUUAGGACGCGGCCCUCUCAAGGCCGAAA-CGGGGGUUCGAUUCCCCCUGGGGUCACC---A
0.5
0.618
RF00005 1N77_C
>Target   GCCGAUAUAGCUCAGUUGGU-AGAGCAGCGCAUUCGUAAUGCGAAGGUCGUAGGUUCGACUCCUAUUAUCG---GCACCA
>1N77 C   GGCCCCAUCGUCUAGC-GGUUAGGACGCGGCCCUCUCAAGGCCGAAA-CGGGGGUUCGAUUCCCCCUGGGGUCACC---A
0.5
0.618
RF00005 2CV1_D
>Target   GCCGAUAUAGCUCAGUUGGU-AGAGCAGCGCAUUCGUAAUGCGAAGGUCGUAGGUUCGACUCCUAUUAUCG---GCACCA
>2CV1 D   GGCCCCAUCGUCUAGC-GGUUAGGACGCGGCCCUCUCAAGGCCGAAA-CGGGGGUUCGAUUCCCCCUGGGGUCACC---A
0.5
0.618
RF00005 2CV0_C
>Target   GCCGAUAUAGCUCAGUUGGU-AGAGCAGCGCAUUCGUAAUGCGAAGGUCGUAGGUUCGACUCCUAUUAUCG---GCACCA
>2CV0 C   GGCCCCAUCGUCUAGC-GGUUAGGACGCGGCCCUCUCAAGGCCGAAA-CGGGGGUUCGAUUCCCCCUGGGGUCACC---A
0.5
0.618
RF00005 1G59_B
>Target   GCCGAUAUAGCUCAGUUGGU-AGAGCAGCGCAUUCGUAAUGCGAAGGUCGUAGGUUCGACUCCUAUUAUCG---GCACCA
>1G59 B   GGCCCCAUCGUCUAGC-GGUUAGGACGCGGCCCUCUCAAGGCCGAAA-CGGGGGUUCGAUUCCCCCUGGGGUCACC---A
0.5
0.618
RF00005 1G59_D
>Target   GCCGAUAUAGCUCAGUUGGU-AGAGCAGCGCAUUCGUAAUGCGAAGGUCGUAGGUUCGACUCCUAUUAUCG---GCACCA
>1G59 D   GGCCCCAUCGUCUAGC-GGUUAGGACGCGGCCCUCUCAAGGCCGAAA-CGGGGGUUCGAUUCCCCCUGGGGUCACC---A
0.5
0.618
RF00005 1C0A_B
>Target   GCCGAUAUAGCUCAGUUGGU-AGAGCAGCGCAUUCGUAAUGCGAAGGUCGUAGGUUCGACUCCUAUUAUCGGCACCA
>1C0A B   GGAGCGG4AGUUCAGDCGGDDAGAAUACCUGCCUQUCACGCAGGGG7UCGCGGGTPCGAGUCCCGPCCGUUCCGCCA
0.442
0.627
RF00005 1F7U_B
>Target   GCCGAUAUAGCUCAGUUGGU-AGAGCAGCGCAUUCGUAAUGCGAAGGUCGUAGGUUCGACUCCUAUUAUCGGCACCA
>1F7U B   PUCCUCGUKLCCCAAD-GGDCACGGCRPCUGGCUICGAACCAGAAGADU?CAGGTPCA"GUCCUGGCGGGGAAGCCA
0.395
0.609

RFAM families found for your sequence with PDB structures with the resolution worse than 2.5 Å:
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