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The results of your job 'run2' are ready.


Structure after analysis:
[run2.pdb]

Geometry of the structure:

        Unusual bond lengths:
- Residue 39 (X[G]:C1',X[G]:N9): 1.24
- Residue 44 (X[G]:C1',X[G]:N9): 1.63
- Residue 32 (X:C4',X:O4'): 1.72
- Residue 32 (X:C5',X:C4'): 1.65
- Residue 5 (X[A]:C1',X[A]:N9): 1.54
- Residue 11 (X[A]:C1',X[A]:N9): 1.54
- Residue 18 (X[A]:C1',X[A]:N9): 1.79
- Residue 19 (X[A]:C1',X[A]:N9): 1.20
- Residue 36 (X[A]:C1',X[A]:N9): 1.67
- Residue 41 (X[A]:C1',X[A]:N9): 1.38
- Residue 45 (X[A]:C1',X[A]:N9): 1.78
- Residue 32 (X:O4',X:C1'): 1.33
- Residue 32 (X:C4',X:C3'): 1.38
- Residues 18 --- 17 (X:O3',X+1:P): 1.46
- Residues 18 --- 19 (X:O3',X+1:P): 1.83
- Residues 24 --- 23 (X:O3',X+1:P): 1.47
- Residues 26 --- 25 (X:O3',X+1:P): 1.44
- Residues 28 --- 29 (X:O3',X+1:P): 1.48
- Residues 30 --- 29 (X:O3',X+1:P): 1.85
- Residues 31 --- 30 (X:O3',X+1:P): 1.50
- Residues 32 --- 33 (X:O3',X+1:P): 1.26
- Residues 42 --- 41 (X:O3',X+1:P): 1.89
- Residues 44 --- 45 (X:O3',X+1:P): 2.11

Unusual bond angles:
- Residues 26 --- 25 (X:C3',X:O3',X+1:P): 140.22
- Residue 19 (X[A]:C1',X[A]:N9,X[A]:C8): 108.30
- Residue 41 (X[A]:C1',X[A]:N9,X[A]:C8): 117.33
- Residue 45 (X[A]:C1',X[A]:N9,X[A]:C8): 105.38
- Residue 32 (X:C3',X:C2',X:C1'): 110.55
- Residues 3 --- 4 (X:O3',X+1:P,X+1:O5'): 79.61
- Residues 4 --- 5 (X:O3',X+1:P,X+1:O5'): 64.84
- Residues 6 --- 5 (X:O3',X+1:P,X+1:O5'): 50.58
- Residues 8 --- 7 (X:O3',X+1:P,X+1:O5'): 80.48
- Residues 10 --- 9 (X:O3',X+1:P,X+1:O5'): 123.67
- Residues 10 --- 11 (X:O3',X+1:P,X+1:O5'): 87.00
- Residues 12 --- 11 (X:O3',X+1:P,X+1:O5'): 89.68
- Residues 13 --- 12 (X:O3',X+1:P,X+1:O5'): 88.64
- Residues 15 --- 14 (X:O3',X+1:P,X+1:O5'): 73.68
- Residues 20 --- 19 (X:O3',X+1:P,X+1:O5'): 142.95
- Residues 22 --- 23 (X:O3',X+1:P,X+1:O5'): 88.27
- Residues 24 --- 23 (X:O3',X+1:P,X+1:O5'): 75.45
- Residues 25 --- 24 (X:O3',X+1:P,X+1:O5'): 87.83
- Residues 26 --- 27 (X:O3',X+1:P,X+1:O5'): 123.47
- Residues 28 --- 27 (X:O3',X+1:P,X+1:O5'): 121.80
- Residues 37 --- 38 (X:O3',X+1:P,X+1:O5'): 79.86
- Residues 42 --- 41 (X:O3',X+1:P,X+1:O5'): 137.52

Unusual dihedral angles:
- Residues 20 --- 19 (X:O3',X+1:P,X+1:O5',X+1:C5'): 336.58
- Residues 28 --- 29 (X:O3',X+1:P,X+1:O5',X+1:C5'): 335.15
- Residue 5 (X:O5',X:C5',X:C4',X:C3'): 138.10
- Residue 22 (X:O5',X:C5',X:C4',X:C3'): 246.26
- Residue 38 (X:O5',X:C5',X:C4',X:C3'): 123.83
- Residue 25 (X:C5',X:C4',X:C3',X:O3'): 112.19


Clashing residues:
- Residues 6 (G) --- 31 (G) 
- Residues 39 (G) --- 42 (G) 
- Residues 32 (U) --- 33 (C) 

    
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