Genesilico RNA metaserver results for "szpilka_short2"


  1........10........20........30........40........50........60...
GAAAUAAGAUCACUACCGGGCGUAUGCACUCGUUCCUCGAGUUUUUCUCGAGGAAGCUAAAAUG
Afold(...............((((........))))(((((((((.....)))))))))........)Program output
PknotsRG.............[[[.{{{.]]]....}}}.[[[[[[[[[.{{{{]]]]]]]]]...}}}}..
RNAfold................((((.(....).))))(((((((((.....))))))))).........
Contrafold................((((.(....).))))(((((((((.....))))))))).........
RNAsubopt......((........((((.(....).))))(((((((((.....))))))))).))......Other predicted ss
RNAshapes((.......)).....((((........))))(((((((((.....))))))))).........Other predicted ss
Mfold................((((........))))(((((((((.....))))))))).........Other predicted ss
RDfolder................((((........))))(((((((((.....))))))))).........
consensus1................................................................
consensus0.75................((((........))))(((((((((.....))))))))).........
consensus0.5................((((........))))(((((((((.....))))))))).........


Download results in Viena format


Afold Contrafold Mfold PknotsRG




RDfolder RNAfold RNAshapes RNAsubopt






consesnus0.5 consesnus0.75 consesnus1