2026-04-30 05:59:03 NPdock start
2026-04-30 05:59:03 ver: server
2026-04-30 05:59:03 mode: 11111
2026-04-30 05:59:03 is RNA? 0
2026-04-30 05:59:03 Interface: prot: '' na: ''
2026-04-30 05:59:03 Curr dir:/home/rpdock/web/media/jobs/afdd7ce5-d68d-4722-a089-36193f51774d/
2026-04-30 05:59:03 GRAMM in progress...
2026-04-30 05:59:03 python /home/rpdock/run_gramm//run_gramm1.py -d 20000 -p prot.pdb -r na.pdb  -pi '' -ri '' -n 1 -pf '*' -rf '*'
2026-04-30 06:33:19 Traceback (most recent call last):
  File "/home/rpdock/run_gramm//run_gramm1.py", line 657, in <module>
    gr_res = GRAMM_Wrapper(args.Scan, args.protein, args.rna, args.protein_frag, args.rna_frag, args.protein_int, args.rna_int, n_dec)
  File "/home/rpdock/run_gramm//run_gramm1.py", line 36, in __init__
    self.big_f_first_lines, self.small_f_first_lines, self.def_p_big = self.run_gramm()
  File "/home/rpdock/run_gramm//run_gramm1.py", line 526, in run_gramm
    self.clash_procedure(frak_clash, direc_names, d_name, r, self.Scan, LOW_NOW = False)
  File "/home/rpdock/run_gramm//run_gramm1.py", line 437, in clash_procedure
    self.gen_decoys()
  File "/home/rpdock/run_gramm//run_gramm1.py", line 417, in gen_decoys
    self.run_coord()
  File "/home/rpdock/run_gramm//run_gramm1.py", line 304, in run_coord
    p = subprocess.Popen(run_scan, shell=True, stderr=subprocess.PIPE)
  File "/usr/lib/python2.7/subprocess.py", line 711, in __init__
    errread, errwrite)
  File "/usr/lib/python2.7/subprocess.py", line 1235, in _execute_child
    self.pid = os.fork()
OSError: [Errno 12] Cannot allocate memory