ClaRNA

Doublet Group info: classifier/base-phosphate/H_0BPh/GC

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: base-phosphate
Desc: H_0BPh/GC
Sub-clusters:
count: 27     show
H_0BPh/GC/sub-001
H_0BPh/GC/sub-002
H_0BPh/GC/sub-003
H_0BPh/GC/sub-004
H_0BPh/GC/sub-005
H_0BPh/GC/sub-006
H_0BPh/GC/sub-007
H_0BPh/GC/sub-008
H_0BPh/GC/sub-009
H_0BPh/GC/sub-010
H_0BPh/GC/sub-011
H_0BPh/GC/sub-012
H_0BPh/GC/sub-013
H_0BPh/GC/sub-014
H_0BPh/GC/sub-015
H_0BPh/GC/sub-016
H_0BPh/GC/sub-017
H_0BPh/GC/sub-018
H_0BPh/GC/sub-019
H_0BPh/GC/sub-020
H_0BPh/GC/sub-021
H_0BPh/GC/sub-022
H_0BPh/GC/sub-023
H_0BPh/GC/sub-024
H_0BPh/GC/sub-025
H_0BPh/GC/sub-026
H_0BPh/GC/sub-027
Members:
count: 369
download members
1QCU:A5:C5
1QCU:A0:C0
1QCU:A10:C10
1QCU:D0:B0
1QCU:A6:C6
1QCU:A7:C7
1QCU:D5:B5
1QCU:D6:B6
1QCU:D10:B10
1QCU:D4:B4
1QCU:A1:C1
1QCU:A9:C9
1QCU:A4:C4
1QCU:D9:B9
1QCU:D7:B7
1QCU:D2:B2
1QCU:D1:B1
1QCU:A3:C3
1QCU:D8:B8
1QCU:A8:C8
1QCU:A2:C2
1QCU:D3:B3
1FJG:A1476:A1473
1XMQ:A1470:A1467
3KNH:A1467:A1464
3F1H:A2431:A2485
3F1F:A2431:A2485
2ZJR:X2234:X2288
1ZJW:B70:B72
3KNI:A2352:A2406
3R8T:A2439:A2493
3U5H:52569:52623
3I56:02323:02377
3CCJ:02323:02377
3R8S:A2440:A2494
1K8A:A2323:A2377
3U5D:12568:12622
3G71:02323:02377
3CCL:02323:02377
2OTL:02323:02377
3CCR:02323:02377
1YJ9:02323:02377
3CCQ:02323:02377
3CC7:02323:02377
3CCE:02323:02377
1YIT:02323:02377
2QA4:02322:02376
1VQO:02323:02377
1VQK:02323:02377
3CCM:02323:02377
3R8S:A2301:A2303
1F27:B5:A5
3OH7:A2623:A2622
3OH5:A2623:A2622
3U5B:2336:2338
3OHZ:A2623:A2622
3OI1:A2623:A2622
3OHJ:A2623:A2622
3OHK:A2623:A2622
1U9S:A108:A110
3CCJ:0173:032
1Q82:A173:A32
1NJI:A173:A32
1VQ6:0173:032
1N8R:A173:A32
3CCR:0173:032
3G71:0173:032
3CCS:0173:032
1YJW:0173:032
1VQ7:0173:032
1VQ4:0173:032
3CCE:0173:032
1JJ2:0173:032
1S72:0173:032
1KD1:A173:A32
1YI2:0173:032
3CCU:0173:032
1Q86:A173:A32
3CME:0173:032
1M90:A173:A32
3G6E:0173:032
1YJN:0173:032
1QVG:0173:032
1FFK:0172:032
3CC4:0173:032
1K8A:A173:A32
1VQ5:0173:032
3CXC:0173:032
3CCV:0173:032
2OTJ:0173:032
1YIJ:0173:032
3CC2:0173:032
1K9M:A173:A32
2OTL:0173:032
3I56:0173:032
3CC7:0173:032
3CD6:0173:032
3CCL:0173:032
3CPW:0173:032
1YHQ:0173:032
1Q81:A173:A32
1YIT:0173:032
2QEX:0173:032
1VQ9:0173:032
3CMA:0173:032
2QA4:0173:032
1YJ9:0173:032
3CCM:0173:032
3KNI:A196:A39
3F1F:A199:A39
3F1H:A199:A39
3L3C:S34:S84
3U5B:21227:21217
3U5F:61239:61229
3U5F:61452:61450
1VQ6:01592:01528
3CC2:01592:01528
2QEX:01592:01528
1VQK:01592:01528
1FFK:01545:01481
3CCM:01592:01528
3U5B:21440:21438
3CMA:01592:01528
1VQM:01592:01528
1VQL:01592:01528
3OHZ:A2137:A2136
3OI1:A2137:A2136
1XMQ:A1195:A1194
2VQF:A1200:A1199
2UUB:A1200:A1199
2VQE:A1200:A1199
1FJG:A1200:A1199
1N32:A1200:A1199
2UUA:A1200:A1199
3KNK:A229:A230
2UXC:A1200:A1199
3OHY:A1200:A1199
3OI0:A1200:A1199
3CCV:01004:0902
3SLM:A11:A39
1VQ6:01004:0902
2OTL:01004:0902
3CCL:01004:0902
1VQ4:01004:0902
1YI2:01004:0902
1JJ2:01004:0902
3CPW:01004:0902
1S72:01004:0902
1NJI:A1004:A902
1YHQ:01004:0902
3CCU:01004:0902
1YIJ:01004:0902
3CC2:01004:0902
3CC4:01004:0902
1YJ9:01004:0902
3CD6:01004:0902
3G6E:01004:0902
3CC7:01004:0902
1N8R:A1004:A902
3CMA:01004:0902
1K8A:A1004:A902
1VQK:01004:0902
1Q86:A1004:A902
3CCQ:01004:0902
3CCR:01004:0902
3CCE:01004:0902
3CCM:01004:0902
1VQP:01004:0902
3CXC:01004:0902
1Q82:A1004:A902
1VQ7:01004:0902
3G71:01004:0902
3CCJ:01004:0902
3SKL:A10:A38
1YIT:01004:0902
2OTJ:01004:0902
1KD1:A1004:A902
1Q81:A1004:A902
1YJW:01004:0902
1VQL:01004:0902
1VQ8:01004:0902
1VQO:01004:0902
3CCS:01004:0902
3I56:01004:0902
1M90:A1004:A902
3KNK:A1017:A1011
1YJN:01004:0902
1VQN:01004:0902
3CCJ:01067:01061
1QVG:01004:0902
1VQM:01004:0902
1VQ5:01004:0902
3CME:01004:0902
2QEX:01004:0902
1K9M:A1004:A902
1VQ9:01004:0902
2QA4:01003:0901
3SKL:B10:B38
1FFK:01003:0901
3SKI:B11:B39
3CME:01067:01061
3SLM:B11:B39
3CMA:01067:01061
2QA4:01066:01060
2QEX:01067:01061
3CCM:01067:01061
3CCL:01067:01061
1Q81:A1067:A1061
3CCS:01067:01061
3G71:01067:01061
1YJ9:01067:01061
3CC7:01067:01061
3CD6:01067:01061
3CCR:01067:01061
3I56:01067:01061
1K9M:A1067:A1061
1YJN:01067:01061
1M90:A1067:A1061
1VQ7:01067:01061
1K8A:A1067:A1061
2ZJR:X842:X841
1NJI:A1067:A1061
1Q86:A1067:A1061
3CXC:01067:01061
2OTJ:01067:01061
2ZZN:C32:C33
3CC4:01067:01061
1JJ2:01067:01061
1YIT:01067:01061
1S72:01067:01061
1QVG:01067:01061
3CCU:01067:01061
3CC2:01067:01061
1YI2:01067:01061
1VQN:01067:01061
1FFK:01066:01060
3U5D:1280:187
1Q82:A1067:A1061
1YHQ:01067:01061
1VQO:01067:01061
1KD1:A1067:A1061
3CCQ:01067:01061
3G6E:01067:01061
2OTL:01067:01061
3CCV:01067:01061
1VQK:01067:01061
1VQ8:01067:01061
1VQ6:01067:01061
1YIJ:01067:01061
1VQL:01067:01061
1VQ4:01067:01061
1VQM:01067:01061
1N8R:A1067:A1061
1VQ9:01067:01061
1VQP:01067:01061
1VQ5:01067:01061
3CPW:01067:01061
3U5H:5280:587
1YJW:01067:01061
3CCE:01067:01061
3U5H:5186:5221
1DQH:B7:B6
1ZHO:F24:F23
1ZHO:D24:D23
2HW8:B23:B22
1ZHO:B24:B23
1ZHO:H24:H23
2QA4:01756:01755
1VQP:01757:01756
3CME:01757:01756
1FFK:01710:01709
1QVG:01757:01756
1VQL:01757:01756
1Q81:A1757:A1756
1VQM:01757:01756
1VQO:01757:01756
1VQ5:01757:01756
1VQ7:01757:01756
3CCM:01757:01756
1K8A:A1757:A1756
1VQN:01757:01756
1N8R:A1757:A1756
1VQ8:01757:01756
1KD1:A1757:A1756
1YIT:01757:01756
1M90:A1757:A1756
3CPW:01757:01756
1YJW:01757:01756
1YJ9:01757:01756
3CMA:01757:01756
1NJI:A1757:A1756
3CXC:01757:01756
1JJ2:01757:01756
1YJN:01757:01756
1VQ6:01757:01756
1K9M:A1757:A1756
1S72:01757:01756
1Q82:A1757:A1756
3CC2:01757:01756
1YHQ:01757:01756
1VQK:01757:01756
1Q86:A1757:A1756
1VQ9:01757:01756
1YIJ:01757:01756
1YI2:01757:01756
2OTL:01757:01756
1VQ4:01757:01756
3CC4:01757:01756
3CCV:01757:01756
3CC7:01757:01756
3CCE:01757:01756
3G6E:01757:01756
2QEX:01757:01756
2OTJ:01757:01756
3CCU:01757:01756
3CCR:01757:01756
3I56:01757:01756
3CCJ:01757:01756
3G71:01757:01756
3CCS:01757:01756
1FFK:02276:02330
3CD6:02323:02377
3G6E:02323:02377
1VQ4:02323:02377
1VQ6:02323:02377
1Q81:A2323:A2377
1FG0:A314:A368
1Q86:A2323:A2377
3OI1:A2277:A2331
1QVG:02323:02377
3CXC:02323:02377
3OHK:A2277:A2331
3OH7:A2277:A2331
1NJI:A2323:A2377
1YJN:02323:02377
3CC4:02323:02377
1N8R:A2323:A2377
1S72:02323:02377
1JJ2:02323:02377
1KD1:A2323:A2377
3CC2:02323:02377
3OHJ:A2277:A2331
1Q82:A2323:A2377
3OH5:A2277:A2331
1VQ5:02323:02377
1K9M:A2323:A2377
3OHZ:A2277:A2331
1VQ7:02323:02377
1M90:A2323:A2377
1YHQ:02323:02377
2OTJ:02323:02377
3CCV:02323:02377
1YIJ:02323:02377
1YJW:02323:02377
2QEX:02323:02377
1YI2:02323:02377
3CMA:02323:02377
3CME:02323:02377
1VQP:02323:02377
1VQL:02323:02377
3CPW:02323:02377
1VQN:02323:02377
1VQM:02323:02377
1VQ8:02323:02377
1VQ9:02323:02377
3CCL:01757:01756
3CCQ:01757:01756
3CD6:01757:01756
Closest classifer groups: show all      show selected
Group Members RMSD
base-phosphate/H_0BPh 189 2.535
special/HS_cis 1 2.783
special/SH_cis 1 2.783
base-phosphate/W_6BPh 83 2.786
base-phosphate/W_5BPh 950 2.905
bp/HW_tran 3696 3.260
bp/HW_cis 6 3.864
bp/WH_cis 6 3.864
stacking/<> 155 3.939
base-phosphate/S_1BPh 836 3.957

Extra

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Reference image (generated by PyMOL):
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All members (generated by PyMOL):
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