ClaRNA

Doublet Group info: classifier/base-ribose/H_0BR/GC

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: base-ribose
Desc: H_0BR/GC
Sub-clusters:
count: 34     show
H_0BR/GC/sub-001
H_0BR/GC/sub-002
H_0BR/GC/sub-003
H_0BR/GC/sub-004
H_0BR/GC/sub-005
H_0BR/GC/sub-006
H_0BR/GC/sub-007
H_0BR/GC/sub-008
H_0BR/GC/sub-009
H_0BR/GC/sub-010
H_0BR/GC/sub-011
H_0BR/GC/sub-012
H_0BR/GC/sub-013
H_0BR/GC/sub-014
H_0BR/GC/sub-015
H_0BR/GC/sub-016
H_0BR/GC/sub-017
H_0BR/GC/sub-018
H_0BR/GC/sub-019
H_0BR/GC/sub-020
H_0BR/GC/sub-021
H_0BR/GC/sub-022
H_0BR/GC/sub-023
H_0BR/GC/sub-024
H_0BR/GC/sub-025
H_0BR/GC/sub-026
H_0BR/GC/sub-027
H_0BR/GC/sub-028
H_0BR/GC/sub-029
H_0BR/GC/sub-030
H_0BR/GC/sub-031
H_0BR/GC/sub-032
H_0BR/GC/sub-033
H_0BR/GC/sub-034
Members:
count: 495
download members
3F1H:A2234:A2480
3F1F:A2234:A2480
3OH7:A2080:A2326
2J01:A2127:A2373
3OH5:A2080:A2326
2J03:A2127:A2373
3OHJ:A2080:A2326
3OHK:A2080:A2326
1GAX:D37:D36
3U5D:12079:12055
1GAX:C37:C36
2ZJR:X2037:X2283
1FJG:A1191:A1190
3F1H:A1923:A1899
3F1F:A1923:A1899
3KNI:A1844:A1820
2J03:A1845:A1821
2J01:A1845:A1821
3OH7:A1845:A1821
3OH5:A1845:A1821
3OHK:A1845:A1821
3OHJ:A1845:A1821
3OI1:A1845:A1821
3OHZ:A1845:A1821
3R8T:A1810:A1809
3R8N:V17:V16
1XJR:A10:A9
3CCM:02018:02017
3R8S:A1810:A1809
1VQ9:02018:02017
3CCJ:02018:02017
1G1X:E39:E38
3CD6:02018:02017
1VQ8:02018:02017
1Q82:A2018:A2017
1VQ7:02018:02017
1Q81:A2018:A2017
1VQ4:02018:02017
1VQL:02018:02017
1VQO:02018:02017
3CC4:02018:02017
3CME:02018:02017
2OTL:02018:02017
1VQN:02018:02017
1VQ5:02018:02017
3CCU:02018:02017
1FG0:A9:A8
1VQK:02018:02017
3CCQ:02018:02017
1VQM:02018:02017
2OTJ:02018:02017
1M90:A2018:A2017
2QEX:02018:02017
3CPW:02018:02017
1N8R:A2018:A2017
1JJ2:02018:02017
3CC2:02018:02017
1S72:02018:02017
1YJW:02018:02017
1VQ6:02018:02017
1YHQ:02018:02017
3G6E:02018:02017
1KD1:A2018:A2017
1VQP:02018:02017
3CC7:02018:02017
3CMA:02018:02017
3CCS:02018:02017
2QA4:01915:01903
3CCE:02018:02017
1Q86:A2018:A2017
3CCL:0925:0695
1K9M:A2018:A2017
1YI2:02018:02017
3CC7:01916:01904
1YIT:02018:02017
1YIT:02048:02377
2QEX:01521:01520
3G6E:02048:02377
3CXC:02048:02377
1YIJ:02048:02377
1YI2:02048:02377
3CPW:02048:02377
1VQK:02048:02377
3G71:02048:02377
1YJ9:02048:02377
2ZJR:X1926:X2288
1YHQ:02048:02377
2QEX:02048:02377
1NJI:A2048:A2377
3CC7:02048:02377
1Q81:A2048:A2377
1K9M:A2048:A2377
1N8R:A2048:A2377
2OTL:02048:02377
3CD6:02048:02377
1VQN:02048:02377
1FFK:02001:02330
2J03:A1977:A2378
3CC4:02048:02377
2J01:A1977:A2378
1YJW:02048:02377
1QVG:02048:02377
1VQM:02048:02377
1Q82:A2048:A2377
1VQL:02048:02377
1FG0:A39:A368
1KD1:A2048:A2377
1VQ9:02048:02377
1VQ4:02048:02377
1M90:A2048:A2377
1VQ6:02048:02377
3CMA:02048:02377
1VQP:02048:02377
1VQ8:02048:02377
1JJ2:02048:02377
3CC2:02048:02377
1S72:02048:02377
1Q86:A2048:A2377
3OH5:A1977:A2331
3OH7:A1977:A2331
1VQ5:02048:02377
1VQ7:02048:02377
3CME:02048:02377
3R8T:A1411:A1410
1MHK:S11:S10
3R8T:A1867:A1866
2J00:V26:V25
3OGY:A448:A447
3OGE:A448:A447
3I56:02238:02237
3CCQ:02238:02237
1YJW:02238:02237
3R8S:A1448:A1447
2QEX:02238:02237
3CME:02238:02237
1Q86:A2238:A2237
3CCE:02238:02237
3CCJ:02238:02237
3CCL:02238:02237
1VQ4:02238:02237
1YJ9:02238:02237
3CPW:02238:02237
2OTJ:02238:02237
3G71:02238:02237
1JJ2:02238:02237
1NJI:A2238:A2237
3CMA:02238:02237
1S72:02238:02237
1VQP:02238:02237
3CCV:02238:02237
1VQ8:02238:02237
1YHQ:02238:02237
1VQ9:02238:02237
1YI2:02238:02237
1VQK:02238:02237
1K9M:A2238:A2237
1FG0:A229:A228
1YIJ:02238:02237
1VQ6:02238:02237
1YIT:02238:02237
3CC2:02238:02237
3CXC:02238:02237
1VQN:02238:02237
1YJN:02238:02237
1VQL:02238:02237
3CC4:02238:02237
1QVG:02238:02237
3CC7:02238:02237
1K8A:A2238:A2237
1KD1:A2238:A2237
3CCU:02238:02237
3G6E:02238:02237
1VQO:02238:02237
1N8R:A2238:A2237
1VQ7:02238:02237
1VQM:02238:02237
1VQ5:02238:02237
2J03:A1851:A1850
2J01:A1851:A1850
3CD6:02238:02237
3CCS:02238:02237
3CCM:02238:02237
1Q81:A2238:A2237
3U5F:61711:61710
3F1H:A1519:A1518
3EGZ:B20:B19
1Q82:A2238:A2237
3CCR:02238:02237
3KNK:A2532:A2531
1GID:A26:A25
3R8O:A1140:A1139
1U1Y:S14:S13
3OH5:A148:A147
3OH7:A148:A147
3U5B:21699:21698
3OHY:A1149:A1148
3OI0:A1149:A1148
3NDB:M114:M113
3R8O:A1292:A1291
3OHK:A148:A147
3OHJ:A148:A147
3F1F:A139:A138
3R8N:A1140:A1139
3F1H:A139:A138
3KNK:A2349:A2348
3NDB:M131:M130
3OHZ:A148:A147
3OI1:A148:A147
3KNH:A651:A650
3KNK:A2508:A2506
1N32:A381:A380
3OHZ:A1425:A1424
3R8O:A1000:A999
1N32:A913:A912
2J00:A480:A479
3KNK:A452:A451
3KNI:A1431:A1430
1XMQ:A1105:A1104
2VQE:A1110:A1109
2VQF:A1110:A1109
3KNH:A548:A547
1FJG:A1141:A1140
3MJA:B9:B7
3KNI:A1301:A1300
3R8N:A1351:A1350
3KNK:A154:A153
3KNH:A460:A459
3U5D:1240:1239
3OHC:A83:A82
3OHD:A83:A82
2UUA:A480:A479
2VQF:A381:A380
3R8T:A2595:A2593
3CCE:01169:01168
2UUA:A1452:A1451
1FJG:A1110:A1109
3OGE:A83:A82
3OGY:A83:A82
1KD1:A1169:A1168
3F1F:A2836:A2835
3OHY:A83:A82
3OI0:A83:A82
3G6E:01169:01168
3KNK:A591:A590
1VQ7:01169:01168
3F1H:A2836:A2835
3OH5:A2433:A2431
1K8A:A1169:A1168
3CC4:01169:01168
2UUA:A1110:A1109
3CCJ:01169:01168
3CXC:01169:01168
1Q82:A1169:A1168
3KNI:A2745:A2744
3CCR:01544:01543
3KNI:A260:A259
3CPW:01169:01168
3F1F:A700:A699
3OH7:A2433:A2431
2UUB:A1110:A1109
3F1H:A700:A699
3CME:02479:02477
3OHJ:A2433:A2431
1JJ2:01169:01168
2VQF:A480:A479
2OTJ:01169:01168
3G8T:E4:E3
3OHK:A2433:A2431
3KNK:A2421:A2420
2OTL:02479:02477
3CC7:01169:01168
1Q82:A2479:A2477
3LRN:C7:C6
3CCE:02479:02477
3CCR:01169:01168
3KNI:A452:A451
1YJW:01169:01168
1ZX7:A11:A10
3CCU:02479:02477
1FFK:02432:02430
1N8R:A2479:A2477
3G6E:02479:02477
1KD1:A2479:A2477
3CC7:02479:02477
1Q81:A2479:A2477
1K9M:A2479:A2477
1YIT:02479:02477
1NJI:A2479:A2477
3CCV:02479:02477
3B4A:B115:B55
1YJ9:02479:02477
3CC4:02479:02477
1YHQ:02479:02477
1S72:02479:02477
3I56:02479:02477
1YJW:02479:02477
3U5F:61422:61420
1JJ2:02479:02477
1YI2:02479:02477
3LWR:E7:E6
3CC2:02479:02477
3OGE:A434:A433
3KNH:A1029:A1028
3OGY:A434:A433
2VQF:A1452:A1451
1K8A:A2479:A2477
2OTJ:02479:02477
2QEX:02479:02477
3G71:02479:02477
3MEI:B16:B14
3CCQ:02479:02477
1YIJ:02479:02477
3CCL:02479:02477
3CCS:02479:02477
1IVS:C64:C63
2DU4:C27:C26
2FK6:R42:R41
1FFK:01122:01121
1YJN:02479:02477
2J01:A260:A259
2J03:A260:A259
3F1E:A1207:A1206
3F1G:A1207:A1206
1VTQ:A66:A65
2VQE:A1038:A1037
2CSX:C70:C69
2OJ3:B34:B33
3F1E:A434:A433
1ZX7:G11:G10
3KNI:A1952:A1951
3F1G:A434:A433
2VQE:A1452:A1451
3TRA:A66:A65
3KNI:A2077:A2076
3CXC:02737:02736
3KNK:A669:A668
1YRJ:B20:B19
3F1H:A146:A145
3F1F:A146:A145
1T0E:A12:A11
3KNK:A673:A672
2J00:W62:W61
2J01:B84:B83
2J03:B84:B83
3KNI:A2056:A2055
2QEX:01916:01904
1YIJ:02018:02017
3G6E:0925:0695
1VQ9:01916:01904
1NJI:A2018:A2017
1VQP:01916:01904
1VQM:01916:01904
1M90:A1916:A1904
1K8A:A2018:A2017
1VQN:01916:01904
3I56:02018:02017
1VQK:01916:01904
1VQL:01916:01904
1FFK:01971:01970
3CME:01916:01904
1YJ9:02018:02017
1VQ7:01916:01904
1YIJ:01916:01904
1VQ4:01916:01904
1N8R:A1916:A1904
1YIT:0925:0695
2OTJ:01916:01904
3CCM:01916:01904
1JJ2:01916:01904
1S72:01916:01904
3CCU:01916:01904
3CCR:01916:01904
3G6E:01916:01904
1Q82:A1916:A1904
1VQO:01916:01904
1VQ4:0925:0695
3CXC:01916:01904
1NJI:A1916:A1904
3U5H:52083:52059
1YHQ:0925:0695
1Q86:A1916:A1904
3CMA:01916:01904
1YI2:01916:01904
3CC4:01916:01904
3KNK:A2164:A2163
1QVG:01916:01904
1VQ8:01916:01904
2ZJR:X2046:X2045
2OTL:01916:01904
1K8A:A1916:A1904
3R8S:A1922:A1898
1K9M:A1916:A1904
1KD1:A1916:A1904
3CCE:01916:01904
3CPW:01916:01904
3CD6:0925:0695
3R8T:A1749:A1699
2ZJR:X1794:X1790
2ZJR:X1088:X1087
3R8S:A1749:A1699
3F1H:A2243:A2242
3F1F:A2243:A2242
2QA4:02601:02600
1KUQ:B35:B34
3CCJ:02602:02601
1Q81:A2602:A2601
1YJ9:02602:02601
3R8O:A182:A181
1YJW:02602:02601
3I56:02602:02601
3CCS:02602:02601
2OTJ:02602:02601
1YJN:02602:02601
1K8A:A2602:A2601
3CCR:02602:02601
3CXC:02602:02601
1VQ6:02602:02601
1QVG:02602:02601
1KD1:A2602:A2601
1Q86:A2602:A2601
2OTL:02602:02601
1K9M:A2602:A2601
1YIJ:02602:02601
3CCL:02602:02601
3CCE:02602:02601
3CD6:02602:02601
1VQ5:02602:02601
1YIT:02602:02601
1VQ7:02602:02601
1NJI:A2602:A2601
2QEX:02602:02601
1M90:A2602:A2601
3G71:02602:02601
1YI2:02602:02601
3CCU:02602:02601
1FFK:02554:02553
3G6E:02602:02601
3CCQ:02602:02601
3CC2:02602:02601
3CCV:02602:02601
3CC7:02602:02601
1N8R:A2602:A2601
3CME:02602:02601
1YHQ:02602:02601
1VQ4:02602:02601
1S72:02602:02601
3CCM:02602:02601
3CC4:02602:02601
1JJ2:02602:02601
1Q82:A2602:A2601
1VQ9:02602:02601
3CMA:02602:02601
1VQK:02602:02601
1VQN:02602:02601
1VQ8:02602:02601
3CPW:02602:02601
1VQO:02602:02601
1VQP:02602:02601
1VQL:02602:02601
1VQM:02602:02601
2VQE:A110:A109
1N32:A110:A109
3KNI:A2080:A2079
3KNK:A2793:A2792
3U5B:2403:2401
3KNI:A853:A852
2J03:A1248:A1247
2J01:A1248:A1247
3U5D:12210:12622
3R8S:A2137:A2136
3U5F:6567:6568
3R8T:A1086:A1085
1YJN:02048:02377
3U5B:2570:2571
1VQO:02048:02377
3R8T:A2053:A2493
3CCR:02048:02377
1K8A:A2048:A2377
2OTJ:02048:02377
3CCL:02048:02377
3OH5:A1248:A1247
3OH7:A1248:A1247
3R8N:A1277:A1275
3CCV:02048:02377
3R8T:A1448:A1447
3I56:02048:02377
2J02:W62:W61
3F1G:A226:A225
3OGE:A603:A602
3OGY:A603:A602
2FMT:D70:D69
3KNH:A217:A216
2FMT:C70:C69
3OHC:A603:A602
3OHD:A603:A602
Closest classifer groups: show all      show selected
Group Members RMSD
bp/HW_tran 597 1.004
bp/HW_cis 6 1.012
bp/WH_cis 6 1.012
base-phosphate/H_0BPh 256 1.213
bp/HS_cis 5 1.375
special/HH_tran 1 1.380
bp/HH_tran 66 1.461
base-ribose/H_0BR 590 1.519
bp/HS_tran 428 1.640
bp/HH_cis 6 1.650

Extra

PDB:download
Reference image (generated by PyMOL):
pymol image
show in jmol
All members (generated by PyMOL):
pymol image
show in jmol