ClaRNA

Doublet Group info: classifier/bp/WW_cis/UU

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: bp
Desc: WW_cis/UU
Sub-clusters:
count: 43     show
WW_cis/UU/sub-001
WW_cis/UU/sub-002
WW_cis/UU/sub-003
WW_cis/UU/sub-004
WW_cis/UU/sub-005
WW_cis/UU/sub-006
WW_cis/UU/sub-007
WW_cis/UU/sub-008
WW_cis/UU/sub-009
WW_cis/UU/sub-010
WW_cis/UU/sub-011
WW_cis/UU/sub-012
WW_cis/UU/sub-013
WW_cis/UU/sub-014
WW_cis/UU/sub-015
WW_cis/UU/sub-016
WW_cis/UU/sub-017
WW_cis/UU/sub-018
WW_cis/UU/sub-019
WW_cis/UU/sub-020
WW_cis/UU/sub-021
WW_cis/UU/sub-022
WW_cis/UU/sub-023
WW_cis/UU/sub-024
WW_cis/UU/sub-025
WW_cis/UU/sub-026
WW_cis/UU/sub-027
WW_cis/UU/sub-028
WW_cis/UU/sub-029
WW_cis/UU/sub-030
WW_cis/UU/sub-031
WW_cis/UU/sub-032
WW_cis/UU/sub-033
WW_cis/UU/sub-034
WW_cis/UU/sub-035
WW_cis/UU/sub-036
WW_cis/UU/sub-037
WW_cis/UU/sub-038
WW_cis/UU/sub-039
WW_cis/UU/sub-040
WW_cis/UU/sub-041
WW_cis/UU/sub-042
WW_cis/UU/sub-043
Members:
count: 1134
download members
2ZJR:X2092:X2099
2QEX:01771:01775
3CCM:01771:01775
1VQL:01771:01775
3CXC:01771:01775
3CMA:01771:01775
1VQO:01771:01775
1VQK:01771:01775
3CCR:01771:01775
3CC7:01771:01775
3CC2:01771:01775
1VQN:01771:01775
1YJN:01771:01775
3CCV:01771:01775
1YI2:01771:01775
1YHQ:01771:01775
3CCE:01771:01775
1Q86:A1771:A1775
2QA4:01770:01774
3CCQ:01771:01775
1N8R:A1771:A1775
1KD1:A1771:A1775
2ET3:A17:B3
3R8N:A243:A281
3U5F:61208:61443
3F1H:A3:A2876
3F1F:A3:A2876
2F4S:A17:B3
3OGY:A1283:A1306
3GX3:A25:A66
3U5H:51670:51674
1MWL:A17:B3
205D:A5:B6
3V7E:C25:C98
3KNH:A1030:A1161
3OHY:A1283:A1306
3OI0:A1283:A1306
3KNK:A23:A524
3R8S:A870:A899
3BNQ:A5:B19
3U5D:11209:11220
3HL2:E7:E71
3U5F:61225:61248
3CCJ:01263:01309
3U5B:2119:2296
2OTL:0274:0354
3CCE:01263:01309
3BNQ:C5:D17
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1YJW:0274:0354
3R8O:A1305:A1328
3CCQ:0274:0354
3U5F:6705:6721
3KNK:A2365:A2397
3OHC:A1067:A1072
1YJN:0954:0960
1ZX7:C9:D4
3U5F:6119:6293
3CCL:0274:0354
3KNH:A1274:A1297
3R8S:A279:A359
3CCU:0274:0354
3KNI:A2001:A2138
3R8S:A1852:A1876
3CC7:0274:0354
3BNQ:A19:B5
3CCR:968:9111
3CCS:969:9110
3CC2:0274:0354
3R8N:A1305:A1328
2OE8:A5:B12
2J00:A1067:A1072
1QVG:0274:0354
1JJ2:0274:0354
3OGY:A1039:A1170
1VQ5:0274:0354
3CPW:0274:0354
1Q82:A274:A354
3CCS:0274:0354
1K9M:A274:A354
2UXC:A1039:A1170
2O3V:A18:B3
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2J03:A2025:A2067
3OI1:A1212:A1932
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2J01:A2025:A2067
2XD0:W15:W25
3U5H:5714:5717
3NVI:E3:E19
2J03:A174:A183
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3CCQ:969:9110
2FQN:A4:B17
1Q86:A954:A960
3CCE:969:9110
2OTJ:01263:01309
3CCU:01263:01309
1T0D:C10:D5
3KNK:A1217:A1931
3U5H:52922:53034
3OH7:A23:A524
1Q81:A274:A354
3R8S:A1849:A1879
3U5D:12632:12696
1VQ9:969:9110
3RG5:A7:A78
3CCQ:0954:0960
3OH5:A23:A524
3CCM:0274:0354
3R8T:A1851:A1875
2O3X:A17:B3
1VQ6:0954:0960
3R8S:A2453:A2485
3BNR:C5:D17
2V3C:N5:N41
1KD1:A954:A960
3IQR:A25:A66
1YRJ:A5:B18
2ZJR:X674:X691
3I56:968:9111
2VQF:A1039:A1170
1ZEV:A1:B16
1VQ7:0274:0354
3U5D:12988:13003
3OI0:A122:A219
3F1F:A2080:A2217
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3OHJ:A174:A183
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1VQ9:02336:02368
3BNQ:C19:D3
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2VQF:A1283:A1306
1VQO:0274:0354
1VQN:01263:01309
1YIT:01263:01309
3CC4:0274:0354
1K8A:A954:A960
3OH5:A2002:A2063
1N32:A1067:A1072
3BNS:C5:D17
1Q86:A151:A160
1N32:A1283:A1306
3CD6:0151:0160
3BNO:C3:D17
1YI2:0954:0960
1YJN:01263:01309
3G71:02336:02368
3CCR:01923:01930
3I56:969:9110
2VQE:A1039:A1170
3CD6:02336:02368
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3F1G:A1039:A1170
1Z43:A9:A45
3CXC:0954:0960
1YIJ:01263:01309
3I56:0954:0960
3CPW:0151:0160
2OTJ:01923:01930
3CCQ:0151:0160
2HVY:E22:E34
1N8R:A954:A960
2QA4:0151:0160
3U5H:5905:5916
3CCS:01923:01930
2BEE:A17:B3
3NDB:M24:M60
3IVN:B17:B25
1QVG:968:9111
1NJI:A954:A960
1Q81:A954:A960
1Q81:A2387:A2451
1Q82:A954:A960
3U5D:12765:12793
1VQN:0819:0837
1YJ9:01263:01309
2O3W:A4:B17
2ZJR:X1178:X1881
1VQM:0274:0354
3U5H:51027:51032
3R8T:A2452:A2484
3CCL:969:9110
3CCS:01263:01309
3CMA:0274:0354
3R8N:A131:A227
2J02:A1283:A1306
3CC2:0954:0960
1ZX7:G9:H4
3I56:01263:01309
2BE0:A17:B3
1QVG:0954:0960
1VQM:01923:01930
3CME:01263:01309
2UUB:A1039:A1170
1VQP:01923:01930
1VQN:969:9110
1ZX7:E9:F4
1VQ9:0819:0837
1VQ9:0954:0960
3BNN:A17:B3
3CCV:02336:02368
1Q82:A2336:A2368
1ZX7:A9:B4
3G6E:0151:0160
3CC4:0151:0160
3CCQ:02336:02368
3OHK:A2290:A2322
1VQ8:01923:01930
1VQ5:01923:01930
1M90:A954:A960
1VQL:0819:0837
1VQ9:968:9111
1Q82:A1923:A1930
1VQM:0819:0837
1FFK:0150:0159
1VQ7:01923:01930
3U5F:6110:6299
1VQL:01923:01930
3R8N:A1088:A1093
1M90:B69:B110
1N8R:B69:B110
1YJN:01923:01930
3CCV:968:9111
1VQP:0151:0160
2OTJ:02336:02368
3CCU:0151:0160
1FFK:01216:01262
1VQ4:0954:0960
3CXC:01923:01930
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1YHQ:01923:01930
3G71:969:9110
1VQ4:0151:0160
3U5B:21213:21236
1YIT:968:9111
3CMA:01923:01930
3CCU:968:9111
3CC4:01263:01309
3G6E:01923:01930
3CD6:0954:0960
3KNI:A748:A765
2UXC:A122:A219
1VQ6:968:9111
3R8S:A1196:A1235
3U5D:1183:1227
3U5B:2971:2997
3CPW:01923:01930
3CC7:0151:0160
1FFK:01876:01883
3OHJ:A2290:A2322
1QVG:0151:0160
2OTJ:0151:0160
3CC7:02336:02368
1T0E:A10:C6
1VQ8:969:9110
2VQE:A1067:A1072
2G5K:A18:B4
3CC4:969:9110
3CC4:02336:02368
3F1G:A1283:A1306
3I56:02336:02368
1VQO:0151:0160
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3CXC:01263:01309
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2QEX:968:9111
2OTL:0151:0160
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3CC2:01263:01309
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1VQM:01263:01309
2QA4:016:0505
1M90:A2387:A2451
3F1G:A122:A219
1Q81:A1923:A1930
1YJW:969:9110
1VQK:0954:0960
3F1E:A122:A219
2QEX:02336:02368
3R8S:A192:A201
2UUB:A1067:A1072
3U5D:13053:13065
3OHC:A122:A219
2J03:A23:A524
1VQN:0151:0160
3CC2:969:9110
3U5F:61260:61437
1VQO:969:9110
1YJW:01263:01309
1VQN:968:9111
2OTL:969:9110
1YHQ:0954:0960
1S72:01263:01309
3U5D:12921:13033
1JJ2:01263:01309
1JJ2:969:9110
1MMS:C39:C50
1K8A:A2336:A2368
1K9M:A1263:A1309
3OHD:A122:A219
1YHQ:969:9110
1VQP:969:9110
3CCL:01923:01930
1Q81:B68:B111
1YJW:02336:02368
1QVG:016:0505
3Q3Z:V15:V48
3CXC:969:9110
1VQP:01263:01309
1Y39:D39:D50
1YI2:968:9111
1VQ6:969:9110
1XMQ:A1278:A1301
1VQ9:02387:02451
3CMA:0151:0160
1Q82:A2387:A2451
2J01:A23:A524
2QA4:0818:0836
2OTL:01923:01930
3OH5:A748:A765
1KD1:A2387:A2451
3CCQ:01923:01930
1YJN:0379:0386
1YI2:969:9110
1MZP:B4:B50
3U5H:52766:52794
2OTL:02336:02368
1VQ4:01263:01309
1NJI:B69:B110
1JJ2:01923:01930
1VQ4:969:9110
2OTJ:968:9111
1VQM:968:9111
3U5B:2864:2928
3CCJ:0819:0837
3CXC:0379:0386
3CC2:02387:02451
1Q86:A2387:A2451
1M90:A16:A505
1KD1:B69:B110
1YJ9:02387:02451
1KD1:A16:A505
3U5B:21214:21235
3CCS:02336:02368
3U5B:2110:2302
1FFK:969:9110
3OHK:A748:A765
3CPW:0819:0837
1NJI:A1263:A1309
1YIT:0819:0837
3CCL:0819:0837
3IQN:A25:A66
3R8T:A2837:A2863
3OHD:A1039:A1170
3BNP:A4:B17
2ET8:A17:B3
3BNR:A19:B4
1VQ8:01263:01309
2J03:A2002:A2110
3I56:0274:0354
3CCV:969:9110
3U5F:61052:61054
2QA4:0379:0386
3OH5:A1212:A1932
2QA4:969:9110
3S4P:A3:B17
2J01:A2002:A2110
3BNS:C19:D3
3BNS:A19:B4
3BNO:A3:B17
3CCJ:0151:0160
3CME:0151:0160
1Q86:A2336:A2368
1JJ2:02387:02451
2J03:A748:A765
1YJW:0379:0386
1YJW:02387:02451
1YJ9:02336:02368
1YHQ:968:9111
1KD1:A2336:A2368
3OH7:A748:A765
3U5B:2204:2261
1K9M:A2336:A2368
3F1H:A760:A777
1VQP:968:9111
1FFK:02340:02404
1NJI:A2387:A2451
3CME:0379:0386
3OHJ:A748:A765
3IVN:A17:A25
1VQK:968:9111
1K8A:B69:B110
1Y39:C39:C50
3CPW:02336:02368
1VQ4:968:9111
1VQM:02387:02451
1YIJ:02387:02451
1YIT:02387:02451
1VQ5:968:9111
1VQ5:01263:01309
1YIJ:02336:02368
1VQN:0379:0386
2OTL:968:9111
1VQM:0379:0386
1VQ5:016:0505
1Q81:A819:A837
1YI2:02336:02368
2OTL:02387:02451
1YJ9:969:9110
3CXC:968:9111
3CCU:02387:02451
3Q3Z:A15:A48
1VQO:02336:02368
3CPW:02387:02451
1S72:016:0505
3OHZ:A2290:A2322
1JJ2:016:0505
3CMA:968:9111
3CC4:016:0505
3G71:016:0505
1K8A:A379:A386
3R2D:R6:S2
2OTJ:016:0505
2OTL:016:0505
1Q82:B68:B111
3CCQ:0819:0837
1YI2:016:0505
1YJ9:0379:0386
3KNH:A113:A210
1VQ6:01263:01309
3U5H:5276:5283
1VQO:968:9111
1QVG:969:9110
2OTL:0379:0386
1VQK:02387:02451
1YIJ:968:9111
3CCV:0379:0386
3CPW:01263:01309
1YJW:016:0505
3G6E:0819:0837
1JJ2:968:9111
1YJW:968:9111
3I56:0819:0837
1FJG:A1067:A1072
3CCS:016:0505
3CCU:0379:0386
1YJ9:016:0505
1S72:968:9111
1VQ9:016:0505
1S72:02336:02368
1VQ5:02387:02451
1VQL:02387:02451
1K9M:A379:A386
3CCS:0819:0837
3CCM:968:9111
1Q86:A379:A386
3CCM:0379:0386
3CC4:0379:0386
3U5F:6876:6940
3CC7:02387:02451
3U5B:21658:21707
3U5D:1276:1283
3U5B:21526:21549
1VQK:016:0505
3U5F:61670:61719
3I56:0379:0386
2OTJ:0379:0386
3CCE:0379:0386
1VQL:016:0505
1VQN:016:0505
3U5D:11647:11686
3CD6:0819:0837
1KD1:A379:A386
1YJN:0819:0837
3CCQ:0379:0386
3CCL:0379:0386
1VQ5:0379:0386
1VQ4:02387:02451
1VQ5:0819:0837
1JJ2:0819:0837
1YI2:0379:0386
1N8R:A819:A837
1NJI:A819:A837
1YJ9:0819:0837
1K8A:A819:A837
1VQ7:0819:0837
1M90:A819:A837
3CC7:0379:0386
1FFK:0818:0836
1Q81:A1263:A1309
Closest classifer groups: show all      show selected
Group Members RMSD
bp/WW_cis 328 0.931
base-ribose/H_7BR 298 1.017
bp/WW_tran 109 1.132
bp/HW_tran 11 1.228
bp/SW_cis 305 1.412
bp/WH_tran 123 1.494
base-ribose/W_5BR 172 1.811
stacking/<> 137 1.894
bp/HW_cis 147 1.952
bp/WH_cis 6 1.960

Extra

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Reference image (generated by PyMOL):
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All members (generated by PyMOL):
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