sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5D-1878-1751
X
>3U5H-5884-5757
X
>3OHC-A508-A1464
X
>3OHD-A508-A1464
X
>3OHY-A508-A1464
X
>3OI0-A508-A1464
X
>1N32-A508-A1464
X
>2J02-A508-A1464
X
>2UXC-A508-A1464
X
>2UUB-A508-A1464
X
>1XMQ-A508-A1458
X
</seq>
<hsp>
0 1:0.229931783924
0 2:0.819783161246
0 3:0.809775569333
0 4:0.767647869759
0 5:0.761421885335
0 6:0.944131317309
0 7:0.999998756631
0 8:0.824725749661
0 9:0.84147598862
0 10:0.732673066142
1 2:0.69977053386
1 3:0.690670587849
1 4:0.665254862757
1 5:0.660876000895
1 6:0.932632146967
1 7:0.921484354589
1 8:0.779460924772
1 9:0.790354141181
1 10:0.698354299893
2 3:0.0207710879499
2 4:0.178031151709
2 5:0.190004501856
2 6:0.778633977391
2 7:0.568039824258
2 8:0.649207092336
2 9:0.60712846314
2 10:0.501606628801
3 4:0.162167953776
3 5:0.173461819711
3 6:0.770773254142
3 7:0.563222260547
3 8:0.641609560981
3 9:0.600876019038
3 10:0.491129565575
4 5:0.0174435254279
4 6:0.674474629422
4 7:0.474894425642
4 8:0.535008072769
4 9:0.513125240028
4 10:0.379629587273
5 6:0.670538320254
5 7:0.475965963407
5 8:0.531167024525
5 9:0.511484723186
5 10:0.373755732844
6 7:0.475820065784
6 8:0.452824595592
6 9:0.402035628182
6 10:0.365333882005
7 8:0.299261847379
7 9:0.249435186135
7 10:0.331831102564
8 9:0.14885278742
8 10:0.257611046951
9 10:0.229130664614
</hsp>