ClaRNA

Doublet Group info: classifier/bp/WW_cis/AG

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: bp
Desc: WW_cis/AG
Sub-clusters:
count: 15     show
WW_cis/AG/sub-001
WW_cis/AG/sub-002
WW_cis/AG/sub-003
WW_cis/AG/sub-004
WW_cis/AG/sub-005
WW_cis/AG/sub-006
WW_cis/AG/sub-007
WW_cis/AG/sub-008
WW_cis/AG/sub-009
WW_cis/AG/sub-010
WW_cis/AG/sub-011
WW_cis/AG/sub-012
WW_cis/AG/sub-013
WW_cis/AG/sub-014
WW_cis/AG/sub-015
Members:
count: 1077
download members
3U5H:5569:5444
2QA4:02326:02047
3KNI:A1061:A1058
3CCJ:02327:02048
3OI0:A711:A702
1FFK:0350:0276
1KUQ:B26:B40
3OHC:A589:A607
3KNK:A103:A68
3CXC:0351:0277
1S72:02327:02048
2J00:A589:A607
3OHJ:A2281:A1977
1VQ5:0351:0277
3OHK:A2281:A1977
1FFK:02280:02001
3U5B:2172:2141
2UUB:A589:A607
1FJG:A589:A607
3OH7:A2281:A1977
3CCQ:096:061
3CMA:096:061
1VQ9:096:061
1VQK:0351:0277
3CCJ:02640:02612
1JJ2:096:061
3I56:02327:02048
3CCE:096:061
3CCU:096:061
1N8R:A96:A61
3CPW:02327:02048
1S72:096:061
3R8O:A336:A349
1VQN:02327:02048
1VQP:02327:02048
1YJ9:096:061
2QA4:096:061
1YIJ:096:061
1VQM:02327:02048
3CCJ:096:061
3CCS:096:061
1VQM:096:061
3OHC:A641:A720
3F1G:A589:A607
3OI1:A103:A68
1VQ7:096:061
1YHQ:096:061
3OHZ:A103:A68
3CCL:096:061
1VQL:096:061
3G71:096:061
3CC2:096:061
3CCM:096:061
3R8S:A2444:A2054
1C0A:B26:B44
3G6E:02327:02048
3CXC:02327:02048
3OHY:A89:A63
3KNH:A302:A313
3OI0:A89:A63
3R8T:A110:A74
2UUA:A1012:A999
1N8R:A2327:A2048
3U5H:53052:53068
1YLS:D28:D15
3F1G:Z44:Z26
3F1E:Z44:Z26
3CCV:02640:02612
2ZJR:X1418:X1406
3OHY:A694:A652
3OGY:A89:A63
2J03:A2616:A2644
3CMA:02640:02612
2J02:A132:A210
1YIT:02327:02048
3CME:02640:02612
3KNI:A2644:A2672
1VQ9:02640:02612
3KNK:A587:A572
3CPW:02640:02612
2J02:A89:A63
1GAX:C42:C24
2J00:A89:A63
3OHC:A305:A100
3G71:02640:02612
3KNH:A645:A683
2AZX:C42:C24
1CSL:B9:A4
2ZJR:X508:X493
3F1G:A132:A210
3U5D:496:462
3G6E:02640:02612
1VQL:02640:02612
3OHD:A1212:A917
1IVS:C42:C24
1VQM:02640:02612
2QEX:02640:02612
3CUL:C87:C57
1ASY:R43:R25
1Q81:A2640:A2612
3R8T:A1426:A1553
1YHQ:02640:02612
3CCU:02640:02612
3CC7:02640:02612
1VQ6:02640:02612
1S72:02640:02612
1JJ2:02640:02612
3U5D:12986:13005
3CC2:02640:02612
2OTL:02640:02612
3R8N:A313:A110
1N32:A132:A210
1Q82:A2640:A2612
3HL2:E54:E39
3U5B:21451:21152
1XJR:A16:A33
1YIT:02640:02612
1Z43:A94:A8
1VQ5:02640:02612
1HR2:B3:B112
2J02:A1390:A1459
2ZJR:X2526:X2554
3F1G:A641:A720
3R8T:A2667:A2724
1Y6T:B15:A8
2J00:A641:A720
1FFK:02592:02564
3R8O:A661:A740
1YIJ:02640:02612
1XMQ:A1147:A1132
2J02:A641:A720
1N32:A1152:A1137
3KNI:A163:A196
3OGY:A641:A720
3F1H:A596:A581
3OGE:A641:A720
1O3Z:B15:A8
3OHC:A694:A652
1Q86:A2640:A2612
3OHD:A89:A63
1FJG:A1152:A1137
3KNH:A632:A711
3KNH:A1381:A1450
3I56:02640:02612
3F1G:Y44:Y26
3D0U:A150:A137
3U5H:52172:52188
3F1E:Y44:Y26
3R8N:A1355:A1363
2J03:A587:A572
2J03:A163:A196
3F1G:A328:A341
2J01:A587:A572
3F1E:A328:A341
3U5B:21058:21024
1FG0:A318:A39
3U5F:6849:6810
3U5F:6746:6791
3F1E:A311:A322
2QBZ:X29:X118
3DIZ:A161:A140
1HR2:B94:B24
2V3C:M90:M4
3KNK:A2580:A2638
3U5B:2937:2854
2J00:A1212:A917
3F1G:A1152:A1137
1WVD:B15:A8
3U5F:6383:695
2QEX:0140:0173
3R8N:A661:A740
2UUA:A1390:A1459
2J00:A328:A341
3KNI:A1039:A1077
1N32:A89:A63
2OIH:B43:B62
1GID:B93:B23
3SUX:X9:X87
2VQF:A89:A63
1VQ4:0140:0173
1N32:A305:A100
1YLS:B28:B15
1FFY:T44:T26
3CCJ:02494:02037
3DIG:X161:X140
1L8V:B93:B23
3DIM:A161:A140
3R8S:A1033:A1108
1VQN:0140:0173
3CCM:02494:02037
2UXC:A305:A100
3KNH:A685:A643
2UXC:A89:A63
3U5H:52489:52473
1K9M:A140:A173
1L8V:A93:A23
3OHK:A587:A572
1G1X:D27:E26
3CCU:02494:02037
3DIO:X161:X140
3U5B:2933:2859
3CPW:02494:02037
1Q86:A140:A173
1S72:02494:02037
3U5B:2734:2779
3R8N:A1411:A1485
3OHZ:A2505:A2563
1YJW:02494:02037
3MUR:R4:R90
1VQ9:02494:02037
3DJ2:A161:A140
1FG0:A485:A28
1JJ2:0140:0173
2UUA:A1333:A1342
1VQ5:02494:02037
2OTJ:02437:02423
3R8T:A1033:A1108
3R8O:A127:A230
3CXC:02437:02423
1N8R:A2494:A2037
2HOO:A38:A10
1IL2:D42:D24
1S72:0140:0173
1VQ6:0140:0173
3OHC:A1333:A1342
3U5D:4137:118
3U5H:51201:51187
2UUB:A1212:A917
1VQN:02494:02037
3R8N:A674:A712
1YHQ:02494:02037
3DIM:A22:A68
2J02:A311:A322
2J00:A311:A322
3CC2:0140:0173
1YI2:0140:0173
3U5B:2869:2907
1K8A:A140:A173
3OHD:A1333:A1342
1NJI:A2494:A2037
3DIO:X137:X115
3U5H:51145:51263
1VQ8:0140:0173
3DIG:X137:X115
3OHJ:A587:A572
3G6E:02494:02037
1K8A:A2494:A2037
3SUH:X56:X28
1YJ9:0140:0173
2VQF:A305:A100
3CC4:0140:0173
1XMQ:A89:A63
3CCV:02437:02423
1YIT:02494:02037
3CC2:02437:02423
3CC4:02494:02037
1VQ4:02494:02037
1YIJ:02494:02037
1YI2:02437:02423
1VQM:0140:0173
2J03:A1935:A1951
1YJW:02437:02423
2UUA:A132:A210
3OH5:A2505:A2563
2J01:A1935:A1951
1YJN:02437:02423
2QA4:02493:02036
3G71:02437:02423
3F2T:X81:X94
3R8S:A1426:A1553
3R8N:A714:A672
1VQ9:0140:0173
3CME:02494:02037
3U5D:11139:11257
2R8S:R107:R9
3DIZ:A137:A115
1Q81:A2437:A2423
1VQN:02437:02423
1VQ5:02437:02423
1VQM:02494:02037
3OH5:A2569:A2597
3R8O:A172:A146
2UUB:A1390:A1459
1KD1:A2494:A2037
3CCM:02437:02423
2UXC:A132:A210
1VQ5:0140:0173
3F1E:A1333:A1342
2YIE:Z28:Z41
2J00:A305:A100
1M90:A2494:A2037
1VQO:02494:02037
1VQO:02437:02423
2J03:A1033:A1071
1QVG:02437:02423
3U5D:1476:1504
1NJI:A2437:A2423
2CT8:D44:D26
1VC6:B42:B61
3CCQ:0140:0173
1JJ2:02437:02423
1N8R:A140:A173
1K8A:A2437:A2423
3U5H:52040:52027
1VQ7:02437:02423
3D0X:A6:A153
1J1U:B44:B26
2VQF:A132:A210
1N32:A1212:A917
3OHJ:A163:A196
2J02:A305:A100
3F1F:A2659:A2717
3CCL:02437:02423
2J01:A1033:A1071
1VQ9:02437:02423
1YJ9:02437:02423
2OTJ:0140:0173
3R8O:A1411:A1485
1K9M:A2437:A2423
1Q86:A2437:A2423
2OTL:0140:0173
1FJG:A1390:A1459
1M90:A140:A173
3OI1:A1033:A1071
3OHK:A163:A196
3DIQ:A137:A115
2OJ3:B43:B62
1FJG:A641:A720
1VBY:B43:B62
1N32:A1333:A1342
3CCR:02437:02423
1M5P:B25:B54
3R8O:A476:A452
3F1F:A166:A199
3CUL:C22:C47
3SD1:A4:A83
1Y95:A15:B8
1SJ3:R43:R62
1VQK:02437:02423
3DIR:A9:A164
1Z43:A78:A67
1L9A:B91:B80
1G59:D43:D25
1VQP:02437:02423
3F1G:A1390:A1459
1VQ8:02437:02423
1VQM:02437:02423
2PXF:B31:B20
3DIO:X9:X164
3DIM:A137:A115
2VQE:A1390:A1459
3U5B:21710:21655
2UXC:A694:A652
2VQE:A305:A100
3CME:0140:0173
1FJG:A1333:A1342
3I56:02494:02037
3DIL:A22:A68
1N78:C43:C25
3U5D:13044:12910
3D0U:A6:A153
1Y99:B15:A8
2DXI:C43:C25
3OHC:A311:A322
3DIX:A22:A68
3DIG:X9:X164
3DJ2:A137:A115
1M5K:B25:B54
3OHC:A1390:A1459
3OHD:A1390:A1459
3OGY:A328:A341
1N78:D43:D25
3DIL:A9:A164
2J02:A694:A652
3DIO:X22:X68
3U5D:432:1327
3OGE:A328:A341
3DJ2:A22:A68
2CV0:D43:D25
2DXI:D43:D25
3E5C:A12:A27
2UUB:A694:A652
3DIX:A9:A164
2VQE:A641:A720
3DJ0:A9:A164
157D:B8:A3
3TRA:A43:A25
3F2Q:X81:X94
1FJG:A694:A652
3NDB:M93:M82
1FJG:A654:A692
2VQE:A694:A652
3U5D:11731:11606
3CCJ:0140:0173
1XMQ:A694:A652
3DIG:X22:X68
3OH7:A1033:A1071
3U5F:61722:61667
3U5H:5990:5960
3I2S:B24:C5
2UXC:A328:A341
1SJ4:R43:R62
1FJG:A1212:A917
1LNG:B76:B65
3I2Q:B24:C5
3R8N:A319:A330
3SD3:A33:A43
1WVD:A15:B8
3G78:A281:A268
1GID:B2:B112
3U5F:6881:6919
3D0U:A19:A65
1FJG:A328:A341
2P7F:C11:D5
1HR2:A106:A8
3OI0:A1390:A1459
3OI0:A311:A322
3R8T:A562:A577
3U5H:5482:5510
1ZFT:C11:D5
2BCZ:C11:D5
3I2U:B24:C5
3OGE:A654:A692
2J02:A654:A692
3OGY:A654:A692
3B91:B24:C5
2NPY:C11:D5
3SD1:A51:A25
2FMT:C44:C26
2FMT:D44:D26
2P7E:C11:D5
3R8S:A562:A577
3U5F:6474:6506
2UUB:A328:A341
1HR2:B107:B9
2FGP:C11:D5
3B5A:B24:C5
3OGE:A1390:A1459
3OGY:A1390:A1459
3LQX:B31:B20
2PXL:B31:B20
3DH3:F3:F16
1F7Y:B26:B40
3CQS:B24:C5
1ZFV:C11:D5
2D2K:C11:D5
3OHZ:A1935:A1951
3OHJ:A1935:A1951
2VQE:A311:A322
2VQF:A311:A322
1N32:A311:A322
2UUB:A311:A322
3OHZ:A2281:A1977
1M90:A351:A277
3CMA:02327:02048
2UUA:A589:A607
1K9M:A351:A277
1K8A:A351:A277
1KD1:A351:A277
1Q82:A351:A277
1Q81:A351:A277
3CPW:0351:0277
1VQN:0351:0277
1YIJ:02327:02048
3R8O:A1174:A1158
2QA4:0351:0277
3NPN:A33:A4
3U5B:21738:21627
2J03:A103:A68
3CME:096:061
1VQP:0351:0277
2J01:A103:A68
1Q81:A2327:A2048
3F1F:A103:A68
1VQL:0351:0277
3R8S:A110:A74
1FFK:096:061
1VQ4:02327:02048
2QEX:096:061
2OTJ:096:061
3CC7:02327:02048
1VQ6:02327:02048
1VQ9:02327:02048
1K8A:A96:A61
1VQ8:0351:0277
1YJW:02327:02048
3CPW:096:061
2VQF:A1212:A917
1YIT:02437:02423
2QEX:02494:02037
157D:A8:B3
3DJ0:A161:A140
3CMA:02494:02037
3R8O:A714:A672
1VQ8:02494:02037
1M90:A2437:A2423
3L3C:S93:S126
2OTJ:02494:02037
1YHQ:02437:02423
1VQ6:02437:02423
Closest classifer groups: show all      show selected
Group Members RMSD
bp/WS_tran 186 0.461
bp/WW_tran 11 0.691
bp/WH_tran 26 0.875
bp/SW_cis 198 0.985
bp/HW_tran 684 1.064
bp/HW_cis 6 1.115
bp/WH_cis 6 1.115
bp/WW_cis 18877 1.157
bp/SW_tran 6 1.743
base-ribose/H_7BR 174 1.857

Extra

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Reference image (generated by PyMOL):
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All members (generated by PyMOL):
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