ClaRNA

Doublet Group info: classifier/bp/SW_cis/AC

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: bp
Desc: SW_cis/AC
Sub-clusters:
count: 5     show
SW_cis/AC/sub-001
SW_cis/AC/sub-002
SW_cis/AC/sub-003
SW_cis/AC/sub-004
SW_cis/AC/sub-005
Members:
count: 293
download members
3OHC:A1023:A967
3OHD:A1023:A967
3R8N:A1044:A993
3OHY:A1023:A967
3OI0:A1023:A967
3OGE:A1023:A967
3OGY:A1023:A967
3R8O:A1044:A993
2QA4:0832:0828
3CXC:0833:0829
3KNH:A1014:A958
3R8O:A298:A562
1YJ9:0833:0829
1QVG:0833:0829
1JJ2:0833:0829
1S72:0833:0829
1VQ4:0833:0829
1KD1:A833:A829
1FFK:0832:0828
1K9M:A833:A829
1NJI:A833:A829
3G71:0833:0829
1N8R:A833:A829
3CCJ:0833:0829
1Q81:A833:A829
1YJN:0833:0829
3U5D:345:333
1M90:A833:A829
1VQ7:0833:0829
2OTL:0833:0829
1YIJ:0833:0829
3CD6:0833:0829
3CC2:0833:0829
3CC7:0833:0829
3I56:0833:0829
3CCQ:0833:0829
1K8A:A833:A829
1VQ6:0833:0829
1YIT:0833:0829
1YI2:0833:0829
3CCL:0833:0829
1Q82:A833:A829
3CCU:0833:0829
1VQ5:0833:0829
3G6E:0833:0829
3CCM:0833:0829
1VQK:0833:0829
2VQF:A1023:A967
3CC4:0833:0829
1Q86:A833:A829
2OTJ:0833:0829
1VQP:0833:0829
3CCR:0833:0829
3CCV:0833:0829
2UUB:A1023:A967
2UXC:A1023:A967
1VQM:0833:0829
2QEX:0833:0829
1YHQ:0833:0829
2QA4:0407:01877
2ZJR:X2504:X1647
3CCE:0833:0829
3U5H:567:569
3CCS:0833:0829
1VQL:0833:0829
1VQ9:0833:0829
2VQE:A1023:A967
3CMA:0833:0829
1XMQ:A1018:A967
1VQN:0833:0829
1N32:A1023:A967
1VQ8:0833:0829
1VQO:0833:0829
3CPW:0833:0829
1YJW:0833:0829
3CME:0833:0829
2UUA:A1023:A967
1FJG:A1023:A967
3CCS:0407:01878
1Q81:A407:A1878
2QEX:0407:01878
1YJ9:0407:01878
3U5D:167:169
3R8O:A933:A1381
3R8T:A2719:A2675
2OTL:0407:01878
3I56:0407:01878
3CD6:0407:01878
2J00:A1023:A967
2J02:A1023:A967
3CME:0407:01878
3CCR:0407:01878
1Q82:A407:A1878
3G71:0407:01878
1K9M:A407:A1878
1K8A:A407:A1878
1Q86:A407:A1878
2OTJ:0407:01878
1N8R:A407:A1878
1YI2:0407:01878
3CCE:0407:01878
1VQ5:0407:01878
1FFK:0406:01831
3F1E:A907:A1360
3F1G:A907:A1360
1VQ6:0407:01878
1VQ7:0407:01878
1YJN:0407:01878
1VQN:0407:01878
3CCJ:946:935
1JJ2:0407:01878
1QVG:0407:01878
1YIJ:0407:01878
1M90:A407:A1878
1YJW:0407:01878
3CC2:0407:01878
1S72:0407:01878
1KD1:A407:A1878
3CCQ:0407:01878
1VQL:0407:01878
1VQ7:02006:0526
1NJI:A407:A1878
3R8S:A2720:A2676
1K9M:A2006:A526
1VQO:0407:01878
1VQ4:0407:01878
3CC4:0407:01878
1YIT:0407:01878
3CC7:0407:01878
3CCL:0407:01878
1YHQ:0407:01878
1K8A:A2006:A526
1VQP:0407:01878
1VQM:0407:01878
3CXC:0407:01878
1KD1:A2006:A526
3CCQ:02006:0526
3KNI:B47:B36
3CME:02006:0526
3G6E:0407:01878
3CCU:0407:01878
3CCV:0407:01878
1Q81:A2006:A526
1JJ2:02006:0526
2O3W:A15:B6
1FFK:946:935
3CC2:02006:0526
3U5B:21142:21602
1N8R:A2006:A526
2G5K:A15:B7
2G5K:B15:A7
1NJI:A2006:A526
1S72:02006:0526
3CD6:02006:0526
1YJW:02006:0526
2OTJ:02006:0526
1Q86:A2006:A526
1VQ8:02006:0526
2O3Y:A15:B6
3CCM:0407:01878
3U5D:1552:1540
3CCR:02006:0526
3KNH:A898:A1351
3CCM:02006:0526
1Q82:A2006:A526
1VQP:02006:0526
1FFK:01959:0525
1QVG:32:02272
3CCL:02006:0526
1M90:A2006:A526
1VQO:02006:0526
3OGE:A907:A1360
3CCU:02006:0526
1VQK:02006:0526
3OGY:A907:A1360
3CMA:0407:01878
1VQK:0407:01878
3CMA:02006:0526
2OTL:02006:0526
1YJ9:02006:0526
1VQM:02006:0526
3CPW:0407:01878
1VQ8:0407:01878
3CPW:02006:0526
3CCS:02006:0526
1YHQ:02006:0526
1VQ6:02006:0526
1VQL:02006:0526
3G6E:02006:0526
1VQ5:02006:0526
2VQF:A907:A1360
3G71:02006:0526
1VQ9:02006:0526
2QEX:02006:0526
1YI2:02006:0526
3I56:02006:0526
3CCR:946:935
3CXC:02006:0526
1VQ9:0407:01878
3CC7:02006:0526
2QA4:02005:0526
3CCE:02006:0526
1VQ4:02006:0526
1YIT:02006:0526
2UXC:A907:A1360
3CC4:02006:0526
1FJG:A907:A1360
3OI1:B47:B36
2O3V:A15:B6
1YIJ:02006:0526
3CCJ:02006:0526
1VQN:02006:0526
2FQN:A15:B6
1YJN:02006:0526
1QVG:02006:0526
3OHK:B47:B36
3OHJ:B47:B36
3OH5:B47:B36
3OHZ:B47:B36
3U5H:5558:5546
3CCS:946:935
3CCV:02006:0526
1VQ7:946:935
1N32:A907:A1360
1XMQ:A907:A1354
2QA4:946:935
3G6E:946:935
3OH7:B47:B36
2VQE:A907:A1360
3I56:946:935
3CCE:946:935
2UUB:A907:A1360
3CC4:946:935
2OE6:B9:A8
2UUA:A907:A1360
2OE8:B9:A8
2OTJ:946:935
2J00:A907:A1360
3F1H:B47:B36
3F1F:B47:B36
2J02:A907:A1360
1VQN:946:935
2EES:A60:A35
3CCL:946:935
1Q81:B46:B35
2OE5:B8:A7
1YJW:946:935
3CME:946:935
1VQP:946:935
3CD6:946:935
3U5F:61154:61614
3CC2:946:935
1VQ5:946:935
3CC7:946:935
3U5D:344:334
1QVG:946:935
3CPW:946:935
1VQK:946:935
1VQ8:946:935
3CCU:946:935
1YIT:946:935
3CMA:946:935
3CCV:946:935
1VQ9:946:935
1YHQ:946:935
1S72:946:935
1K8A:B46:B35
1KD1:B46:B35
1JJ2:946:935
1N8R:B46:B35
1VQM:946:935
1VQL:946:935
2OTL:946:935
1M90:B46:B35
1K9M:B46:B35
1Q82:B46:B35
3G71:946:935
1VQ6:946:935
3CCQ:946:935
2QEX:946:935
1VQO:946:935
1YIJ:946:935
1NJI:B46:B35
1YJN:946:935
1Q86:B46:B35
1VQ4:946:935
2J03:B47:B36
2J01:B47:B36
1YI2:946:935
3CCM:946:935
3CXC:946:935
3U5H:744:734
1YJ9:946:935
Closest classifer groups: show all      show selected
Group Members RMSD
bp/SH_tran 142 0.399
base-ribose/W_6BR 85 0.438
bp/WS_tran 193 0.481
bp/SH_cis 1144 0.481
base-ribose/H_9BR 531 0.500
base-ribose/H_7BR 298 0.524
bp/SS_tran 3496 0.757
bp/HS_tran 7533 1.100
bp/HS_cis 111 1.135
special/HS_cis 1 1.160

Extra

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Reference image (generated by PyMOL):
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All members (generated by PyMOL):
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