ClaRNA

Doublet Group info: classifier/bp/WW_cis/CC

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: bp
Desc: WW_cis/CC
Sub-clusters:
count: 16     show
WW_cis/CC/sub-001
WW_cis/CC/sub-002
WW_cis/CC/sub-003
WW_cis/CC/sub-004
WW_cis/CC/sub-005
WW_cis/CC/sub-006
WW_cis/CC/sub-007
WW_cis/CC/sub-008
WW_cis/CC/sub-009
WW_cis/CC/sub-010
WW_cis/CC/sub-011
WW_cis/CC/sub-012
WW_cis/CC/sub-013
WW_cis/CC/sub-014
WW_cis/CC/sub-015
WW_cis/CC/sub-016
Members:
count: 566
download members
3KNK:A1004:A1112
3OI0:A235:A273
3OHY:A235:A273
3OHD:A235:A273
3OHC:A235:A273
3OGE:A235:A273
3OGY:A235:A273
3KNH:A226:A264
3U5D:373:3104
2UXC:A235:A273
1N32:A235:A273
2UUA:A235:A273
3RW6:F15:F48
3KNK:A956:A972
2J00:A235:A273
2J02:A235:A273
2UUB:A235:A273
2VQF:A235:A273
359D:A5:B19
2VQE:A235:A273
1NYI:A5:B18
1FJG:A235:A273
3RW6:H15:H48
3U5F:6310:6350
3U5B:2313:2353
3OGY:A142:A158
3F1E:A235:A273
3OHY:A362:A380
3F1G:A235:A273
1VQM:01425:01436
3I56:0283:0344
2QA4:01424:01435
3BNQ:C8:D13
1F7V:B12:B21
3CME:01540:01571
1YI2:0283:0344
3BNS:A8:B14
3CCJ:0279:0349
2OTL:0283:0344
2OIU:Q24:Q35
3U5D:12283:12300
3CCJ:01540:01571
3CCR:0279:0349
3CCR:01425:01436
3BNR:C8:D13
1Q86:A283:A344
3CCM:01234:01240
1VQL:01234:01240
2OTL:01234:01240
3CCU:0283:0344
1VQ8:0291:0336
2QA4:0551:0582
3CCL:0283:0344
1NJI:A2078:A2107
1VQ8:01234:01240
3CCJ:0924:0992
3CPW:01234:01240
1QVG:0924:0992
1N8R:A924:A992
3CC7:0924:0992
1M90:A1234:A1240
1YHQ:0551:0582
3CXC:01234:01240
3CC4:02343:02359
1YHQ:01234:01240
1K8A:A1234:A1240
1KD1:A1234:A1240
3CD6:0551:0582
1Q86:A2078:A2107
3CCQ:0551:0582
1Q86:A924:A992
1NJI:A1234:A1240
1YJW:0551:0582
3CD6:01234:01240
3CCU:0924:0992
1VQ9:0291:0336
3CC2:0551:0582
1Q82:A924:A992
1Q81:A924:A992
3CC7:0551:0582
1YJN:02343:02359
3CCS:02343:02359
3CCR:01234:01240
1NJI:A924:A992
1KD1:A551:A582
2ZJR:Y81:Y96
3CCE:0924:0992
1VQ9:01234:01240
1K8A:A924:A992
1VQK:0551:0582
1VQ9:0924:0992
1Q82:A2078:A2107
3I56:02343:02359
1YIT:0551:0582
1KD1:A924:A992
3I56:02078:02107
1N8R:A2078:A2107
3CCL:0924:0992
2QEX:02343:02359
1VQ5:0924:0992
3CC4:0924:0992
3CMA:02078:02107
1VQ6:0924:0992
1VQL:0283:0344
3CCS:01234:01240
1VQ9:02343:02359
1VQM:0283:0344
3CCJ:0291:0336
1Q86:A1234:A1240
1VQ8:0551:0582
3CCE:01234:01240
1Q81:A1234:A1240
1QVG:0551:0582
3CCE:0551:0582
1VQK:0283:0344
3CPW:0924:0992
2OTL:02078:02107
3CCM:02343:02359
3G6E:02343:02359
1NJI:A2343:A2359
1K9M:A924:A992
3CC7:02078:02107
3CPW:02343:02359
1NJI:A551:A582
3CXC:0924:0992
1K9M:A551:A582
1VQ4:02078:02107
1VQO:0551:0582
3CCS:0924:0992
1VQ6:02343:02359
1FFK:01378:01389
3CCQ:02343:02359
3CCS:02078:02107
1Q82:A551:A582
1YIT:02343:02359
1VQO:0924:0992
1Q81:A2343:A2359
3G71:0924:0992
1VQP:0924:0992
1VQM:02343:02359
1Q86:A2343:A2359
1Q82:A2343:A2359
1Q81:A2078:A2107
3G6E:0924:0992
1N8R:A551:A582
1VQN:02343:02359
3CCR:0924:0992
1YHQ:02343:02359
3CME:0924:0992
1YIJ:0551:0582
3CCV:0924:0992
1YIT:02078:02107
3CD6:02343:02359
1S72:0551:0582
1VQ7:0924:0992
3CCV:02078:02107
1VQO:02343:02359
3CMA:0924:0992
1VQP:02343:02359
3CC7:02343:02359
1VQK:02343:02359
1VQL:02343:02359
2OTJ:02343:02359
1FFK:0923:0991
1JJ2:0551:0582
2OTJ:0924:0992
1KD1:A2343:A2359
3CCM:0924:0992
1VQL:0924:0992
3CXC:02343:02359
1VQ5:02343:02359
3CC2:02343:02359
1YIJ:02343:02359
1VQN:0924:0992
1VQ7:02343:02359
1S72:02343:02359
1VQK:0924:0992
1VQ4:02343:02359
1JJ2:02343:02359
3G71:02343:02359
1K9M:A2343:A2359
2OTL:02343:02359
1YI2:02343:02359
1YJ9:02078:02107
1M90:A2343:A2359
3CD6:0924:0992
1YJN:02078:02107
1VQ5:0559:0574
2OTJ:0559:0574
3CCS:0559:0574
3CCJ:01425:01436
1K8A:A283:A344
1JJ2:0283:0344
1S72:0283:0344
3BNQ:A8:B15
2GJW:I17:J2
1VQ9:0279:0349
1KD1:A283:A344
1YJN:0283:0344
1Q82:A283:A344
1N8R:A283:A344
1F7U:B12:B21
2GJW:E17:F2
2OTJ:0283:0344
2QA4:0279:0349
1K9M:A283:A344
1YZ9:E4:F4
1QVG:0283:0344
1M90:A283:A344
3CME:0559:0574
3OHZ:A2297:A2313
3CCM:0559:0574
1QVG:0559:0574
3CCE:0559:0574
1Q81:A559:A574
3G6E:0559:0574
3CME:0279:0349
1YZ9:C4:D4
1Q82:A1540:A1571
3OI1:A2297:A2313
1FFK:01493:01524
1N8R:A1540:A1571
1Q86:A559:A574
1Q81:A283:A344
1YJW:01540:01571
1VQ5:0283:0344
1VQN:0279:0349
1K8A:A559:A574
3CMA:01540:01571
1Q86:A1540:A1571
2QEX:02078:02107
3CCS:0279:0349
1KD1:A559:A574
1M90:A559:A574
3CCL:0279:0349
1K8A:A1540:A1571
3OH7:A2297:A2313
3CPW:0559:0574
3G71:0559:0574
3CCJ:0559:0574
1KD1:A1540:A1571
3CC4:0559:0574
3CC2:0559:0574
1K9M:A559:A574
2J03:A2344:A2360
3CCS:01425:01436
3CCV:0279:0349
1K9M:A1540:A1571
1Q81:A1540:A1571
3CCE:0279:0349
2ZJR:X80:X101
3CPW:0283:0344
1JJ2:0559:0574
3CC7:01540:01571
1S72:0559:0574
3G6E:0283:0344
3KNI:A2372:A2388
2ZJR:X2254:X2270
2J01:A2344:A2360
1JJ2:01540:01571
1YIT:0283:0344
1VQ7:01540:01571
3CCM:0279:0349
1VQL:0559:0574
3R8T:A2459:A2475
3CC2:01540:01571
1VQ5:01425:01436
3BNS:C8:D13
3CME:01234:01240
1M90:A1540:A1571
3CXC:0283:0344
1YIT:0279:0349
3CD6:0279:0349
1S72:01540:01571
3CCU:0279:0349
3CCQ:0279:0349
3CCJ:0551:0582
1NJI:A1540:A1571
3OHJ:A2297:A2313
3U5B:21156:21447
1YHQ:0559:0574
2QEX:01234:01240
1VQ6:0283:0344
1FG0:A69:A98
1VQ5:0279:0349
3CCM:01425:01436
1YJW:0279:0349
3CCJ:01234:01240
1VQ8:0279:0349
1VQ6:01540:01571
3CMA:0279:0349
3CXC:0559:0574
3CMA:0559:0574
1VQP:0559:0574
1YIT:01540:01571
1VQN:02078:02107
3CCU:0559:0574
2OTJ:01540:01571
1VQM:0279:0349
1VQ8:0559:0574
3CD6:01540:01571
3CXC:01540:01571
1YJW:0291:0336
3R8S:A2460:A2476
3CPW:02078:02107
2OTL:01540:01571
1YI2:01540:01571
1VQ5:01540:01571
1YI2:0559:0574
3CME:0291:0336
1EFW:D32:D38
3CCL:0559:0574
3CMA:01425:01436
2QEX:0283:0344
3CCQ:01540:01571
1YIJ:0559:0574
1YHQ:01540:01571
1VQ7:0279:0349
3CC4:01425:01436
1YIJ:01540:01571
3CCS:0283:0344
3CME:02343:02359
3R8S:A875:A894
3CC2:0283:0344
3U5F:6691:6735
1VQ4:01540:01571
1VQO:02078:02107
1VQL:0279:0349
1YJW:01425:01436
2QA4:0559:0574
1YJN:01425:01436
3CCV:01425:01436
3CC4:0279:0349
2OTL:0559:0574
3CCV:01540:01571
3CC4:01540:01571
1VQK:0559:0574
1YJW:0283:0344
1VQ9:02078:02107
1C0A:B32:B38
3G6E:01540:01571
3CCJ:02343:02359
1FFK:0558:0573
1NJI:A1425:A1436
1VQ9:0559:0574
1VQ8:02078:02107
1VQK:02078:02107
3CD6:0559:0574
1YIT:01425:01436
3CCU:01234:01240
1YJW:0559:0574
1Q86:A1425:A1436
1YJ9:01540:01571
3MEI:A8:B13
1K9M:A1425:A1436
3CC7:0559:0574
2OTJ:0291:0336
3CD6:0283:0344
2OTJ:01234:01240
1FFK:01187:01193
3CCJ:02078:02107
1K8A:A1425:A1436
3CCE:01425:01436
3R8N:A1260:A1271
3CCE:01540:01571
1YHQ:02078:02107
1VQO:0559:0574
3CD6:01425:01436
1YJN:0559:0574
1VQP:0283:0344
1VQ7:02078:02107
3G71:01540:01571
3CCR:02078:02107
1VQ7:01425:01436
3CC2:02078:02107
1VQ5:02078:02107
3CCV:01234:01240
3CPW:0279:0349
1FFK:02031:02060
1S72:02078:02107
3CC2:01425:01436
3CCQ:02078:02107
3G71:02078:02107
1K8A:A279:A349
1VQO:01234:01240
2OTJ:0551:0582
1QVG:01234:01240
2OTJ:02078:02107
3CMA:0291:0336
2OTL:01425:01436
3I56:01234:01240
3CCQ:0559:0574
3CCL:02343:02359
3CC7:01425:01436
1KD1:A1425:A1436
1NJI:A279:A349
3CCU:01540:01571
3CC7:01234:01240
1YHQ:0283:0344
3CCM:0283:0344
1VQ6:02078:02107
1Q82:A1425:A1436
1S72:01425:01436
1YJN:01234:01240
1FFK:0282:0343
3CCR:0283:0344
1QVG:01425:01436
3CXC:02078:02107
1VQ9:01425:01436
3CCQ:01425:01436
1YJ9:01234:01240
1K9M:A2078:A2107
3CMA:0283:0344
3I56:01425:01436
1M90:A2078:A2107
3G71:0551:0582
1N8R:A279:A349
1YIT:0291:0336
1JJ2:01425:01436
3CCL:01234:01240
3I56:0559:0574
1YI2:0291:0336
1VQ6:01425:01436
3CMA:01234:01240
1VQP:02078:02107
3G6E:02078:02107
3CCQ:01234:01240
1S72:0279:0349
1YIT:01234:01240
1VQ6:01234:01240
1YI2:02078:02107
1Q82:A279:A349
1VQL:02078:02107
1VQM:02078:02107
1VQN:0283:0344
1JJ2:02078:02107
3CC4:02078:02107
3CCR:0551:0582
3CCE:02078:02107
1VQO:01425:01436
1JJ2:0279:0349
2OTL:0924:0992
3CPW:01425:01436
3CCE:0283:0344
3CXC:01425:01436
1VQ8:01425:01436
3CC2:0924:0992
3G6E:0551:0582
3CC7:0283:0344
3CC4:01234:01240
1YJW:02343:02359
1YHQ:01425:01436
1YJW:0924:0992
1YJN:0551:0582
2QA4:02342:02358
1VQN:0291:0336
3CME:0283:0344
3CC4:0551:0582
3CCL:0551:0582
3CCU:02343:02359
1YIT:0559:0574
1VQO:0283:0344
1VQK:01234:01240
3CC2:01234:01240
1VQ9:0283:0344
3CCM:02078:02107
2OTL:0551:0582
1YJN:0924:0992
1K8A:A2078:A2107
3CD6:02078:02107
1YJ9:0924:0992
3U5D:11650:11682
3G6E:01234:01240
1YIT:0924:0992
3CCQ:0924:0992
1YI2:01234:01240
1VQ5:01234:01240
1YI2:0551:0582
1VQP:01234:01240
1QVG:02343:02359
3G71:01234:01240
1YIJ:01425:01436
1KD1:A2078:A2107
1YIJ:01234:01240
1YHQ:0924:0992
3CC4:0283:0344
3CCV:02343:02359
1EFW:C32:C38
3CCU:0551:0582
3CCV:0283:0344
1K9M:A1234:A1240
1JJ2:01234:01240
3CCL:02078:02107
1VQN:0551:0582
1VQN:01234:01240
1YI2:0924:0992
1VQ9:0551:0582
1VQL:0551:0582
3CCV:0551:0582
1JJ2:0924:0992
Closest classifer groups: show all      show selected
Group Members RMSD
bp/HW_cis 147 0.494
bp/HS_cis 1 1.046
bp/WW_cis 57582 1.080
base-ribose/W_5BR 75 1.291
bp/SW_tran 9 1.385
special/SH_tran 1 1.680
special/HS_tran 1 1.680
special/HS_cis 1 1.842
special/SH_cis 1 1.842
base-ribose/W_6BR 925 2.104

Extra

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Reference image (generated by PyMOL):
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All members (generated by PyMOL):
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