ClaRNA

Doublet Group info: classifier/bp/SS_tran/AG

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: bp
Desc: SS_tran/AG
Sub-clusters:
count: 15     show
SS_tran/AG/sub-001
SS_tran/AG/sub-002
SS_tran/AG/sub-003
SS_tran/AG/sub-004
SS_tran/AG/sub-005
SS_tran/AG/sub-006
SS_tran/AG/sub-007
SS_tran/AG/sub-008
SS_tran/AG/sub-009
SS_tran/AG/sub-010
SS_tran/AG/sub-011
SS_tran/AG/sub-012
SS_tran/AG/sub-013
SS_tran/AG/sub-014
SS_tran/AG/sub-015
Members:
count: 3496
download members
2J02:A363:A460
3OHD:A363:A460
3OH5:A827:A942
3R8S:A910:B78
1VQ9:01817:01836
1YI2:01817:01836
1N8R:A1817:A1836
1YIJ:01817:01836
2ZJR:X2061:X867
3CCL:088:071
3OGE:A1167:A1045
1YIT:088:071
1VQ8:088:071
3OI1:A172:A807
1VQ4:01446:01655
3CC2:0149:0879
1QVG:0149:0879
1YHQ:0149:0879
1N32:A272:A237
1S72:088:071
1VQP:088:071
3CCR:0991:0927
1Q86:A991:A927
1K9M:A1446:A1655
1N32:A1167:A1045
1M90:A149:A879
1VQ5:0991:0927
2QBZ:X56:X7
3CCS:0991:0927
2UXC:A682:A666
3OHY:A1491:A1469
2UXC:A745:A1483
3G71:0991:0927
2J02:A1491:A1469
3SD1:A7:A43
1VQK:01446:01655
1VQL:0991:0927
3OH5:A618:A241
1YJW:088:071
1VQM:0991:0927
3CCL:0991:0927
3F1H:A1320:A1644
2J00:A272:A237
3CMA:0991:0927
3I56:088:071
1VQO:0991:0927
3R8N:A150:A66
3R8T:A383:A244
3R8S:A102:A84
3KNI:A1778:A2002
1Q81:A1057:A1034
3CCJ:01889:02113
2J01:A1250:A1566
3CCJ:0181:0401
3U5D:11114:11091
3KNI:A2687:A2532
1VQK:01111:01175
3CME:059:044
2VQE:A141:A63
1N8R:A1340:A1360
3KNK:A1016:A1009
3OGE:A836:A889
3OI1:A2166:A2161
3CCE:02202:02141
1Q81:A1889:A2113
1VQM:01057:01034
1VQP:02753:02662
1K9M:A654:A219
2UUA:A141:A63
3CC2:02202:02141
1VQ8:02202:02141
1KD1:A1868:A2074
1VQP:01057:01034
3KNK:A2647:A2429
3OHZ:A912:A2107
3OI1:A912:A2107
3R8T:A442:A1238
1M90:A2202:A2141
3R8O:A1337:V29
3CME:02202:02141
2QA4:0653:0219
3CCV:01889:02113
3OHJ:A1779:A2003
3OHK:A1728:A1747
3CCR:01889:02113
1XMQ:A253:A222
1QVG:02202:02141
1VQM:02202:02141
3CC4:02202:02141
1VQ9:01340:01360
1QVG:92:920
3F1G:A836:A889
1Q86:A654:A219
1YHQ:02202:02141
1N8R:A1057:A1034
3OHJ:A1735:A1318
1GID:B83:B78
1S72:01057:01034
1NJI:A1057:A1034
3CCV:0654:0219
1M90:A1057:A1034
3OH5:A1735:A1318
3CXC:02202:02141
3OI0:A836:A889
3CCQ:0654:0219
3OHK:A312:A345
1K8A:A1889:A2113
2QA4:92:920
3CMA:01868:02074
3OH7:A1735:A1318
1FFK:01056:01033
1Q82:A2202:A2141
3KNI:A618:A241
3CCQ:01889:02113
3CC7:01868:02074
1QVG:0554:01052
2VQE:A1146:A1066
1VQ7:0554:01052
1FJG:A836:A889
1NJI:A1111:A1175
3CCE:070:084
1VQO:01889:02113
1S72:0554:01052
1M90:A1111:A1175
1M90:A1868:A2074
1K8A:B2:B20
1L3D:A19:A3
3CPW:059:044
3CC2:0554:01052
1Q86:A554:A1052
2OTL:070:084
1N8R:A1889:A2113
3OHD:A1411:A309
1VQ7:0654:0219
2OTJ:92:920
3KNI:A626:A622
1VQ5:02211:02206
3R8S:A442:A1238
3CCJ:059:044
2VQE:A55:A95
1YIJ:01889:02113
1JJ2:0654:0219
3CC2:01868:02074
1VQO:01868:02074
3CCS:02655:02503
3CMA:0554:01052
1VQ9:01868:02074
3CCE:01868:02074
3CCU:01868:02074
3CXC:02211:02206
3OHZ:A1735:A1318
3CC7:0554:01052
3I56:02655:02503
1Q81:A2520:A2552
1FG0:A202:A197
3OHY:A55:A95
1VQ8:02211:02206
1VQO:02753:02662
3OXM:A40:B83
1YIT:02655:02503
1YI2:92:920
1M90:A2211:A2206
3CC4:01868:02074
2ZJR:X1463:X1382
3OHK:A1105:A976
3G6E:01868:02074
3CCR:92:920
2ZJR:X1696:X1716
1YI2:02655:02503
1VQ5:01574:01501
1YHQ:02211:02206
3CD6:02655:02503
3CCR:070:084
2OTJ:01574:01501
3OI1:A1728:A1747
1VQ5:0926:0986
1VQP:92:920
2VQF:A55:A95
3CCS:0554:01052
1VQ8:92:920
1YI2:070:084
1VQM:92:920
1YHQ:02655:02503
3R8T:A1538:A1458
3CMA:070:084
2QEX:02655:02503
3OHZ:A1105:A976
3CC4:02655:02503
1K8A:A926:A986
1JJ2:059:044
3CCR:0181:0401
1K9M:A926:A986
3CCE:01915:01903
3I56:01915:01903
1VQ7:070:084
1KD1:A1452:A1408
3R8S:A2734:A2517
3I56:070:084
1VQ6:0451:0446
1VQ6:01915:01903
3CC7:02722:01764
2OTJ:0926:0986
1NJI:A1452:A1408
1VQ5:01915:01903
3G6E:02722:01764
2XD0:W23:W6
1YJN:0524:02021
1VQL:01574:01501
3R8T:A585:A808
2YIE:Z47:X32
3OHJ:A1342:A1287
2J03:A1011:A1004
1K8A:A1041:A1005
3F1F:A1947:A2533
1N8R:A540:A1282
1YJW:0631:0889
2QEX:01041:01005
3U5H:5863:51945
3KNK:A965:A2400
3F1F:A2549:A2529
1K9M:B10:B67
1VQ6:01289:01259
1KD1:A540:A1282
3CCU:01041:01005
3CD6:01041:01005
1Q81:A1418:A850
2QEX:910:967
2UUA:A197:A131
1Q82:A1940:A2425
3U5D:1604:1885
3CCM:0540:01282
3OH7:A528:A1209
3CC7:01289:01259
2J01:A119:A48
3CCM:01590:01526
1YJW:01289:01259
3CC7:01590:01526
3R8S:A974:A2020
3OHZ:A253:A282
1VQN:01824:01434
1VQP:0861:01790
3U5H:5406:51391
1Q82:A1041:A1005
3OI1:A2395:A2375
3CCE:0540:01282
3OH5:A985:A947
1Q86:A540:A1282
2UXC:A1245:A1288
3CCJ:01066:01059
1VQM:910:967
3F1F:A1245:A1213
3G71:0754:02056
3OH5:A2428:A2266
3CMA:0754:02056
1FFK:0753:02009
2J03:A1175:A1143
3CCU:0509:01323
1VQ8:0861:01790
1VQ4:0754:02056
3OI1:A1869:A2379
3CC4:0754:02056
2J01:A1175:A1143
1K9M:A1590:A1526
1VQ7:01041:01005
3CMA:0509:01323
2QA4:0231:0262
1YIJ:01041:01005
1YJ9:01041:01005
1VQK:02745:02686
1YJW:01940:02425
1KD1:A1041:A1005
3F1F:A1564:A1485
2QEX:02441:02421
2QA4:01065:01058
1YJN:01940:02425
1VQN:910:967
2OIU:P62:Q47
1NJI:A1590:A1526
1YJ9:02474:02312
1N8R:A1590:A1526
1YJ9:01418:0850
3CC2:0509:01323
2QA4:0509:01322
2QEX:01066:01059
3KNI:A2293:A2185
1YJN:910:967
1Q81:A231:A262
1VQL:01940:02425
3U5D:11479:1846
1YJW:910:967
3CXC:02441:02421
3CD6:0754:02056
3CPW:01940:02425
1VQM:01940:02425
3OHK:A1175:A1143
3OHZ:A528:A1209
3CCQ:02474:02312
3CCS:01418:0850
1K8A:A1418:A850
2NZ4:P111:P23
3OI1:A1175:A1143
1M90:A509:A1323
1VQ5:01590:01526
1JJ2:0509:01323
2VQE:A197:A131
3CD6:02441:02421
3CCR:01590:01526
3CCL:01940:02425
1VQO:02474:02312
3U5D:12686:12666
3CCQ:02441:02421
1VQK:01418:0850
3CCE:02474:02312
3CCR:01418:0850
3CC4:02474:02312
3DJ0:A80:A13
3CCE:01418:0850
1YI2:01418:0850
3CC4:01418:0850
1VQN:02441:02421
1KD1:A509:A1323
1KD1:A2441:A2421
2OTJ:0231:0262
3CC2:02441:02421
1K8A:A2441:A2421
1Q81:A509:A1323
1YJ9:0231:0262
1YJW:01418:0850
3CCQ:0231:0262
1VQ4:0231:0262
1VQP:0231:0262
1VQ9:0231:0262
1VQN:0231:0262
1N8R:A2655:A2503
1KD1:A1915:A1903
3R8T:A456:A451
1Q86:A926:A986
3CPW:01574:01501
3CCL:0181:0401
1VQ9:02655:02503
3KNI:A204:A422
3G71:0524:02021
3G6E:01915:01903
3U5H:51154:52587
1YI2:02722:01764
3OH5:A66:A51
3CCL:01574:01501
1FFK:01777:01387
1KD1:A2655:A2503
1VQ4:059:044
1Q81:A181:A401
1YIT:01452:01408
3CME:01038:02014
2OTL:01452:01408
1VQM:0451:0446
1VBX:B66:B29
3OH5:A1011:A1004
3CC2:01824:01434
3OI1:A457:A1194
3R8T:A1377:A1336
1YHQ:0451:0446
1YJ9:059:044
3CD6:0520:02501
1VQ8:01452:01408
1YJ9:0524:02021
3F1H:A1029:A1022
1YHQ:01452:01408
2UUB:A600:A37
2QEX:0181:0401
1YIT:0451:0446
3D2V:A43:A8
3F1E:A1375:A894
2J00:A55:A95
3CMA:01452:01408
1VQL:01452:01408
1K8A:A181:A401
2VQF:A931:A1197
3CC4:0451:0446
3CCR:0524:02021
1NJI:A451:A446
3CCR:0451:0446
3OH7:A982:A1943
3CCS:0524:02021
3OGY:A1375:A894
1N8R:A1915:A1903
3F4H:Y6:X40
2J03:A2619:A2401
2OTJ:02722:01764
3OHJ:A1333:A1292
3CCR:0686:0729
2QA4:01037:02013
3OGY:A552:A546
3OHY:A552:A546
1K8A:A1915:A1903
3OHY:A600:A37
3KNI:A471:A466
1VQ9:0181:0401
3U5D:1621:1647
1NJI:A1824:A1434
2UUB:A552:A546
3CMA:0437:01308
1S72:0181:0401
1YJW:0926:0986
2UUA:A552:A546
1YJ9:01915:01903
3OI1:A2638:A2461
3OH5:A119:A48
1N32:A600:A37
3CCR:01452:01408
3OHJ:A960:A2325
1Q82:A181:A401
3CC2:0437:01308
3CCM:0520:02501
1QVG:01824:01434
3R8T:A953:A2487
1KD1:A437:A1308
1YI2:0181:0401
1FFK:0450:0445
3R8O:A911:A20
3OHZ:A1333:A1292
3OHC:A552:A546
1Y39:D34:D4
1Q82:A686:A729
3R8S:A293:A79
2OTJ:0451:0446
1S72:0437:01308
3CCU:01824:01434
2VQF:A600:A37
3F2Q:X100:X32
1VQ7:0181:0401
3OH5:A253:A282
3D2G:B43:B8
1K8A:A524:A2021
2OTL:0631:0889
1VQN:0181:0401
2ZJR:X914:X890
2ZJR:X998:X968
3OHK:A1078:A2399
3F1H:A604:A829
3CCV:01824:01434
3OXD:A10:A72
3CCR:02266:02160
2OTJ:0524:02021
3CCJ:0754:02056
3F1H:A2842:A1753
3CMA:01038:02014
3CCS:01824:01434
1VQP:0631:0889
1VQ8:01461:01403
3CCV:01461:01403
1N8R:A2266:A2160
1QA6:D34:D4
3CCQ:0861:01790
3F1H:A207:A429
1YHQ:01038:02014
3R8S:A1538:A1458
3D2V:B43:B8
1VQN:01590:01526
3OH7:A1342:A1287
2QEX:0861:01790
3CCL:0540:01282
3OWI:B10:B72
3G6E:0540:01282
3CME:910:967
1YJW:0754:02056
1YJ9:01066:01059
3CC7:01066:01059
1FFK:0630:0888
3I56:01038:02014
3F1F:A66:A51
3CCU:0540:01282
1QVG:02745:02686
3CCR:910:967
3I56:0631:0889
1YJ9:02266:02160
3CC2:01461:01403
2QEX:01289:01259
3G8T:Q86:Q67
3CCJ:02266:02160
3KNI:A253:A282
1Q81:A1289:A1259
1VQ8:0540:01282
2OTL:02474:02312
3OHZ:A2428:A2266
1QVG:0861:01790
3CCL:01824:01434
3CPW:01289:01259
1VQO:01289:01259
3CCJ:01289:01259
1VQK:01038:02014
3KNI:A2763:A1674
3OI1:A595:A817
1VQL:01824:01434
3G6E:01289:01259
3CCE:0524:02021
1Q86:A1066:A1059
1KD1:A1289:A1259
3U5D:11351:11319
1YIJ:0861:01790
2OTJ:0861:01790
Closest classifer groups: show all      show selected
Group Members RMSD
special/HS_tran 1 0.722
special/SH_tran 1 0.722
bp/WH_cis 23 0.894
special/HS_cis 1 1.002
special/SH_cis 1 1.002
bp/HS_tran 428 1.305
base-ribose/SW_2BR 1723 1.315
base-ribose/W_6BR 925 1.341
bp/SS_cis 840 1.395
bp/WW_tran 400 1.556

Extra

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Reference image (generated by PyMOL):
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All members (generated by PyMOL):
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