ClaRNA

Doublet Group info: classifier/base-ribose/W_3BR/GG

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: base-ribose
Desc: W_3BR/GG
Sub-clusters:
count: 33     show
W_3BR/GG/sub-001
W_3BR/GG/sub-002
W_3BR/GG/sub-003
W_3BR/GG/sub-004
W_3BR/GG/sub-005
W_3BR/GG/sub-006
W_3BR/GG/sub-007
W_3BR/GG/sub-008
W_3BR/GG/sub-009
W_3BR/GG/sub-010
W_3BR/GG/sub-011
W_3BR/GG/sub-012
W_3BR/GG/sub-013
W_3BR/GG/sub-014
W_3BR/GG/sub-015
W_3BR/GG/sub-016
W_3BR/GG/sub-017
W_3BR/GG/sub-018
W_3BR/GG/sub-019
W_3BR/GG/sub-020
W_3BR/GG/sub-021
W_3BR/GG/sub-022
W_3BR/GG/sub-023
W_3BR/GG/sub-024
W_3BR/GG/sub-025
W_3BR/GG/sub-026
W_3BR/GG/sub-027
W_3BR/GG/sub-028
W_3BR/GG/sub-029
W_3BR/GG/sub-030
W_3BR/GG/sub-031
W_3BR/GG/sub-032
W_3BR/GG/sub-033
Members:
count: 370
download members
2J01:A2148:A966
2J03:A2148:A966
3OI1:A2101:A966
3OHZ:A2101:A966
3R8N:A943:A1332
2J00:A917:A1310
2J02:A917:A1310
3F1F:A2255:A984
2HOM:A60:A10
3F1H:A2255:A984
3OHC:A917:A1310
3OHD:A917:A1310
2GDI:X62:X9
3OGE:A917:A1310
3OGY:A917:A1310
3KNI:A1869:A1900
2J01:A1870:A1901
2J03:A1870:A1901
1N32:A1477:A897
3OHY:A1477:A897
3U5B:21750:21131
3G78:A154:A177
1EVV:A19:A21
1EHZ:A19:A21
6TNA:A19:A21
3R8S:A1124:A2033
3KNH:A499:W34
3R8T:A1124:A2032
2QA4:0446:0452
1KD1:A446:A452
1VQ7:0446:0452
1YJ9:0446:0452
2OTL:0446:0452
1VQ6:0446:0452
3CMA:0446:0452
3CCE:0446:0452
3SUX:X26:X75
3SD3:A23:A66
3R8T:A829:A2437
3SD1:A23:A66
3SUH:X26:X75
2ZJR:X762:X2033
2QUS:A19:A44
2ZJR:X764:X2232
2QUW:B7:B32
3OI1:A838:A2275
3OHK:A838:A2275
3OHJ:A838:A2275
1YJW:01777:01735
2QA4:0907:02124
3OHZ:A838:A2275
3F1H:A1766:A1718
3G9C:P134:P87
3F1F:A1766:A1718
3OH7:A1688:A1640
2J03:A838:A2322
2J01:A838:A2322
3R8S:A829:A2438
3CCR:0908:02125
3OH5:A838:A2275
1Q81:A908:A2125
3OH7:A838:A2275
1VQN:0908:02125
3F1F:A850:A2429
1VQL:0908:02125
1VQP:0908:02125
1S72:0908:02125
1VQO:0908:02125
1VQ7:0908:02125
1JJ2:0908:02125
1VQ8:0908:02125
1VQM:0908:02125
3KNK:A837:A2350
1VQK:0908:02125
3F1F:A727:A745
2OTJ:0908:02125
1Q86:A908:A2125
1M90:A908:A2125
3CC2:0908:02125
1YJW:0908:02125
2QEX:0785:0803
3CPW:0908:02125
3CCS:0908:02125
1NJI:A908:A2125
3NDB:M43:M90
1KD1:A908:A2125
2QEX:0908:02125
1YHQ:0908:02125
3CME:0908:02125
3CCL:0908:02125
1Q82:A908:A2125
1YIJ:0908:02125
1YI2:0908:02125
1VQ9:0908:02125
2BTE:B12:B21
1FFK:0907:02078
3KNI:A838:A2350
1K8A:A908:A2125
3CCE:0908:02125
3CCQ:0908:02125
2BTE:E12:E21
1QVG:0908:02125
3G71:0908:02125
1YIT:0908:02125
1K9M:A908:A2125
1VQ6:0908:02125
3CD6:0908:02125
3CCM:0908:02125
1N8R:A908:A2125
2OTL:0908:02125
3G6E:0908:02125
1VQ5:0908:02125
3CCS:0785:0803
3CXC:0908:02125
3R8N:A426:A411
3CCU:0908:02125
3CMA:0908:02125
1NJI:A785:A803
3CC7:0908:02125
3G71:0785:0803
1VQ4:0908:02125
3CC4:0908:02125
3R8N:A411:A426
1YI2:0785:0803
3KNK:A1168:A1189
1Q81:A785:A803
3I56:0908:02125
1Q82:A785:A803
1YJ9:0908:02125
1YJN:0908:02125
3CPW:0785:0803
1VQ7:0785:0803
3CXC:0785:0803
1VQP:0785:0803
3R8O:A411:A426
1M90:A785:A803
1KD1:A1806:A1842
3CC7:0785:0803
3CCV:0908:02125
1VQ5:0785:0803
1JJ2:0785:0803
1YHQ:0785:0803
1VQO:0785:0803
1VQM:0785:0803
2CKY:B10:B29
1S72:0785:0803
1VQL:0785:0803
3G6E:0785:0803
1VQN:0785:0803
2QEX:01806:01842
1FFK:0784:0802
3CC4:0785:0803
3U5D:11957:11994
3CCJ:0908:02125
3CCJ:0444:022
3R8T:A1785:A1821
3F1G:A418:A403
3F1E:A418:A403
3R8O:A426:A411
3CCE:01767:01770
1YJ9:01767:01770
3OHZ:A1678:A1681
3U5H:51961:51998
2J02:A418:A403
2J00:A418:A403
3OI1:A1678:A1681
3CC7:01767:01770
2VQF:A418:A403
3KNK:A1759:A1845
1YIJ:01767:01770
1YJN:01767:01770
2OTL:01767:01770
3CCJ:01767:01770
3F1F:A2785:A2780
3F1H:A2785:A2780
3I56:01767:01770
1VQ7:01920:01955
1VQ5:01767:01770
1KD1:A1920:A1955
1NJI:A1767:A1770
1M90:A1767:A1770
1K8A:A1767:A1770
1FFK:01720:01723
1YI2:01767:01770
1K9M:A1767:A1770
1VQ6:01767:01770
3U5D:336:340
3CCL:01767:01770
3CXC:01767:01770
1VQ4:01767:01770
1QVG:01920:01955
1N8R:A1767:A1770
3KNI:A952:A978
1Q82:A1767:A1770
1QVG:01767:01770
1Q86:A1767:A1770
3R8N:A1062:A1188
3OH5:A1678:A1681
2UUB:A418:A403
2VQE:A418:A403
3OHJ:A1678:A1681
3OH7:A1678:A1681
1Q81:A1767:A1770
3OHK:A1678:A1681
3U5H:736:740
2ZJR:X1646:X1649
3KNH:A409:A394
2QA4:01766:01769
3R8O:A1062:A1188
1NUJ:E6:C6
3U5B:21223:21194
3CCJ:0346:0280
2UXC:A1166:A1041
1FJG:A403:A418
3R8S:A1172:A1164
1N32:A403:A418
3FS0:B6:A3
2HO7:B114:B71
3B4B:B114:B71
2H0Z:B114:B71
2QEX:02649:02513
3B4C:B113:B70
3CME:02649:02513
3CCR:02649:02513
1YJW:02649:02513
1NJI:A2649:A2513
2OTJ:02649:02513
1N8R:A2649:A2513
1YJN:02649:02513
1S72:02649:02513
1JJ2:02649:02513
3CCJ:02649:02513
1Q82:A2649:A2513
1YIT:02649:02513
1KD1:A2649:A2513
3CCV:02649:02513
2ZJR:X81:X99
3CD6:02649:02513
3CCS:02649:02513
1K9M:A2649:A2513
1YIJ:02649:02513
1YI2:02649:02513
3G6E:02649:02513
1K8A:A2649:A2513
3CMA:02649:02513
3CCQ:02649:02513
3CCE:02649:02513
3CCU:02649:02513
1YJ9:02649:02513
1QVG:02649:02513
1M90:A2649:A2513
3CXC:02649:02513
2OTL:02649:02513
3R8S:A2768:A2631
3G71:02649:02513
3CC4:02649:02513
1VQ8:02649:02513
1VQ9:02649:02513
1YHQ:02649:02513
3CC2:02649:02513
3CC7:02649:02513
1Q86:A2649:A2513
3CCL:02649:02513
1Q81:A2649:A2513
1FFK:02601:02465
1VQ4:02649:02513
1VQK:02649:02513
1VQN:02649:02513
1VQO:02649:02513
3CCM:02649:02513
1VQP:02649:02513
1VQM:02649:02513
3CPW:02649:02513
1VQ5:02649:02513
1VQ6:02649:02513
1VQL:02649:02513
3I56:02649:02513
1VQ7:02649:02513
2QA4:02648:02512
2QA4:0234:0252
1YJW:0234:0252
1VQ9:0234:0252
3CME:0234:0252
1VQ6:0234:0252
3SIU:C20:C9
3CCE:0234:0252
1YJN:0234:0252
1YJ9:0234:0252
3I56:0234:0252
3CPW:0234:0252
1E7K:C12:C6
1VQL:0234:0252
1N8R:A234:A252
1YI2:0234:0252
1VQ7:0234:0252
1VQO:0234:0252
1VQ4:0234:0252
1YHQ:0234:0252
3CCV:0234:0252
1Q86:A234:A252
1YIJ:0234:0252
3CC4:0234:0252
1Q82:A234:A252
3CC7:0234:0252
3CCU:0234:0252
3KNI:A734:A712
3G6E:0234:0252
1YIT:0234:0252
2OZB:C23:C12
1NJI:A234:A252
3CCL:0234:0252
3CXC:0234:0252
1S72:0234:0252
3CC2:0234:0252
1VQ8:0234:0252
1KD1:A234:A252
1JJ2:0234:0252
1M90:A234:A252
1VQ5:0234:0252
1QVG:0234:0252
1K8A:A234:A252
1FFK:0233:0251
3CCR:0234:0252
3CCJ:0234:0252
3CCQ:0234:0252
3CCS:0234:0252
1K9M:A234:A252
3CD6:0234:0252
3NVI:E4:E17
3Q3Z:A49:A13
1GTS:B54:B15
1EFW:C57:C17
3NMU:D14:D27
3HAX:E23:E31
3U5F:61249:61223
1C0A:B57:B17
1Q81:A234:A252
2CV0:C55:C16
2UUB:A1281:A1307
3U5B:21702:21662
4TNA:A56:A17
2J02:A1281:A1307
3HJW:D23:D30
3U5F:61714:61674
1RLG:D5:D18
3LWO:D23:D30
3L0U:A56:A17
3KFU:M54:M15
3KFU:N54:N15
3R8N:V56:V17
2CV0:D55:D16
2ZM5:C56:C17
1RLG:C5:C18
3IQN:A18:A34
1O0B:B54:B15
1EUY:B53:B15
3AKZ:F54:F16
3R8S:A536:A554
3GX5:A18:A34
3R8T:A536:A554
3V7E:D18:D34
3U5H:51968:51988
1NUV:C6:E6
1NUV:E6:C6
3U5H:52994:52999
1XMQ:A1161:A1036
2J00:W56:W18
2UUA:A418:A403
3KNK:A1784:A1798
1FJG:A1166:A1041
Closest classifer groups: show all      show selected
Group Members RMSD
bp/SW_cis 6 1.137
base-ribose/W_4BR 362 1.210
stacking/>> 18546 1.321
bp/WH_tran 26 1.343
bp/HW_cis 105 1.419
bp/WW_tran 520 1.527
bp/WW_cis 18877 1.537
stacking/<< 13165 1.650
bp/WH_cis 18 1.813
stacking/>< 642 1.902

Extra

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Reference image (generated by PyMOL):
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All members (generated by PyMOL):
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