ClaRNA

Doublet Group info: classifier/base-ribose/W_3BR/GA

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: base-ribose
Desc: W_3BR/GA
Sub-clusters:
count: 23     show
W_3BR/GA/sub-001
W_3BR/GA/sub-002
W_3BR/GA/sub-003
W_3BR/GA/sub-004
W_3BR/GA/sub-005
W_3BR/GA/sub-006
W_3BR/GA/sub-007
W_3BR/GA/sub-008
W_3BR/GA/sub-009
W_3BR/GA/sub-010
W_3BR/GA/sub-011
W_3BR/GA/sub-012
W_3BR/GA/sub-013
W_3BR/GA/sub-014
W_3BR/GA/sub-015
W_3BR/GA/sub-016
W_3BR/GA/sub-017
W_3BR/GA/sub-018
W_3BR/GA/sub-019
W_3BR/GA/sub-020
W_3BR/GA/sub-021
W_3BR/GA/sub-022
W_3BR/GA/sub-023
Members:
count: 156
download members
3CCM:01337:02585
1VQ9:01337:02585
2J02:A185:A253
3OGY:A185:A253
3OGE:A185:A253
2J00:A185:A253
2VQF:A185:A253
2VQE:A185:A253
3F1E:A185:A253
3F1G:A185:A253
2UUB:A185:A253
3OI0:A185:A253
3OHY:A185:A253
3OHC:A185:A253
3OHD:A185:A253
2J03:B96:A919
1FJG:A185:A253
1N32:A185:A253
1XMQ:A185:A253
2J01:B96:A919
2UUA:A185:A253
3OH7:B96:A919
2UXC:A185:A253
1Q81:A523:A2008
2ZJR:X1163:X382
2ZJR:X2605:X1571
3OHJ:A521:A486
3KNI:A1203:A463
3U5D:11373:1341
3OHZ:A521:A486
3OHK:A521:A486
3OHJ:A1197:A463
3OHK:A1197:A463
3OI1:A521:A486
3OHZ:A1197:A463
2J01:A1197:A463
3OI1:A1197:A463
3OH7:A1197:A463
3OH5:A1197:A463
3U5H:51379:5341
3R8S:A2815:A1645
3R8T:A2814:A1645
2QA4:0864:0766
1FJG:A1013:A978
3KNK:A1202:A463
3G78:A367:A181
2J02:A508:Y10
2UXC:A508:X3
2J00:A508:Y10
3OH7:A1134:A973
3OH5:A1134:A973
3OI1:A1134:A973
3OHZ:A1134:A973
3KNK:A2129:A2113
3OHJ:A2054:A2038
3OHK:A1134:A973
3OHJ:A1134:A973
3OHZ:A2054:A2038
3OHK:A2054:A2038
3R8S:A1179:A966
3OI1:A2054:A2038
3OH5:A2054:A2038
2J01:A1134:A973
2J03:A1134:A973
3R8S:A2217:A2191
3R8T:A1179:A966
3OH7:A2054:A2038
1GAX:C0:C71
3OLA:H0:F2
3OLA:D0:B2
3KNH:W9:W24
3KNK:A1437:A1461
2J00:A1422:A1432
3OL6:H0:F2
3OL6:D0:B2
1GAX:D0:D71
3R8S:A2300:A2304
3R8N:A1314:A1317
3R8S:A2279:A2339
3RKF:D47:D20
3RKF:A47:A20
2ZJR:X408:X411
3R8S:A475:A478
3U5H:5391:5394
1Y27:X48:X21
3R8O:A392:A364
3FO6:A47:A20
3G4M:A47:A20
3U5B:2464:2437
3GER:A47:A20
3U5D:1391:1394
3DS7:A47:A20
3DS7:B47:B20
2EEU:A47:A20
3F1H:A2162:A2165
3F1F:A2162:A2165
1U8D:A47:A20
2XNZ:A46:A19
2G9C:A47:A20
3R8T:A475:A478
3U5F:6461:6434
3R8N:A392:A364
3G78:A126:A172
3R8N:A66:A150
3U5D:11922:11927
3KNI:A1947:A2477
1Q86:A2459:52
3OI0:A210:A198
3OGE:A210:A198
2J02:A210:A198
3OGY:A210:A198
2J00:A210:A198
3OGE:A524:A477
3OGY:A524:A477
1XMQ:A524:A477
3OHK:A647:A638
3OHJ:A647:A638
1FJG:A524:A477
2J02:A524:A477
3OHY:A524:A477
3OI0:A524:A477
2UUB:A524:A477
2UXC:A524:A477
3GS5:A19:A4
2P7D:B6:A4
3F1F:A1351:A1627
3F1H:A1351:A1627
3R8T:A2473:A2460
3U5H:52603:52590
3CCS:02357:02344
3G71:02357:02344
3CCV:02357:02344
3CCL:02357:02344
3G6E:02357:02344
1VQ7:02357:02344
1VQ6:02357:02344
3CCQ:02357:02344
3CC4:02357:02344
3CC7:02357:02344
3CCR:02357:02344
1YIT:02357:02344
1VQ5:02357:02344
1VQK:02357:02344
3I56:02357:02344
1VQO:02357:02344
1VQ8:02357:02344
1QVG:02357:02344
1VQ9:02357:02344
1Q86:A2357:A2344
3CPW:02357:02344
1VQP:02357:02344
1YJW:02357:02344
3CXC:02357:02344
1Q81:A2357:A2344
3U5F:6463:638
3U5B:2466:238
Closest classifer groups: show all      show selected
Group Members RMSD
base-ribose/W_3BR 370 0.963
stacking/>> 9173 1.044
base-phosphate/W_4BPh 1128 1.119
base-phosphate/W_5BPh 327 1.125
base-ribose/W_4BR 362 1.150
base-ribose/H_0BR 590 1.262
bp/HW_cis 23 1.482
bp/WH_cis 23 1.482
bp/WH_tran 1 1.718
base-ribose/W_6BR 214 1.729

Extra

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Reference image (generated by PyMOL):
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All members (generated by PyMOL):
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