ClaRNA

Doublet Group info: classifier/base-ribose/W_3BR/GU

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: base-ribose
Desc: W_3BR/GU
Sub-clusters:
count: 20     show
W_3BR/GU/sub-001
W_3BR/GU/sub-002
W_3BR/GU/sub-003
W_3BR/GU/sub-004
W_3BR/GU/sub-005
W_3BR/GU/sub-006
W_3BR/GU/sub-007
W_3BR/GU/sub-008
W_3BR/GU/sub-009
W_3BR/GU/sub-010
W_3BR/GU/sub-011
W_3BR/GU/sub-012
W_3BR/GU/sub-013
W_3BR/GU/sub-014
W_3BR/GU/sub-015
W_3BR/GU/sub-016
W_3BR/GU/sub-017
W_3BR/GU/sub-018
W_3BR/GU/sub-019
W_3BR/GU/sub-020
Members:
count: 250
download members
3CCR:01813:01832
3R8S:A1792:A1811
3CCQ:01813:01832
3CXC:01813:01832
3R8T:A1792:A1811
3OH7:A1724:A1743
3CCU:01813:01832
3OI1:A1724:A1743
1JJ2:01813:01832
3G71:01813:01832
3CME:01813:01832
1S72:01813:01832
3OH5:A1724:A1743
1NJI:A1813:A1832
3CC2:01813:01832
3CCE:01813:01832
1VQ9:01813:01832
3CC7:01813:01832
3CCV:01813:01832
3OHZ:A1724:A1743
3CCJ:01813:01832
1Q81:A1813:A1832
1K9M:A1813:A1832
1VQO:01813:01832
1VQ6:01813:01832
1YI2:01813:01832
3CC4:01813:01832
3CCM:01813:01832
2QEX:01813:01832
3CCS:01813:01832
1YJ9:01813:01832
1Q82:A1813:A1832
1VQM:01813:01832
3CMA:01813:01832
3G6E:01813:01832
1YJN:01813:01832
1M90:A1813:A1832
1VQ8:01813:01832
1VQN:01813:01832
3CPW:01813:01832
2OTJ:01813:01832
1VQ4:01813:01832
1VQL:01813:01832
3CD6:01813:01832
2OTL:01813:01832
1YIJ:01813:01832
1Q86:A1813:A1832
1VQ7:01813:01832
1VQ5:01813:01832
1YHQ:01813:01832
1VQP:01813:01832
1VQK:01813:01832
3I56:01813:01832
1YJW:01813:01832
3KNK:A2242:A2201
3U5D:1554:11280
3U5H:5560:51286
1VQ8:01753:01596
3CCJ:01753:01596
1FFK:01706:01549
1YJ9:01753:01596
1VQN:01753:01596
1M90:A1753:A1596
1Q86:A1753:A1596
3CCM:01753:01596
1Q81:A1753:A1596
1YIJ:01753:01596
1KD1:A1753:A1596
2QEX:01753:01596
3CMA:01753:01596
1S72:01753:01596
1VQO:01753:01596
1JJ2:01753:01596
2OTL:01753:01596
1Q82:A1753:A1596
3CPW:01753:01596
1K9M:A1753:A1596
1QVG:01753:01596
1VQP:01753:01596
1K8A:A1753:A1596
3CC7:01753:01596
1VQ9:01753:01596
3CD6:01753:01596
1N8R:A1753:A1596
2OTJ:01753:01596
1VQM:01753:01596
1NJI:A1753:A1596
1VQK:01753:01596
1VQL:01753:01596
1YI2:01753:01596
3CXC:01753:01596
3CC4:01753:01596
3CC2:01753:01596
3U5H:52339:52266
1VQ5:01753:01596
3CCV:01753:01596
1YJN:01753:01596
3CCU:01753:01596
1YHQ:01753:01596
3I56:01753:01596
1VQ6:01753:01596
2QA4:01752:01595
3CCR:01753:01596
3G6E:01753:01596
3CCL:01753:01596
3CCQ:01753:01596
3CME:01753:01596
1VQ7:01753:01596
3CCS:01753:01596
3CCE:01753:01596
3G71:01753:01596
1VQ4:01753:01596
1YIT:01753:01596
1YJW:01753:01596
3U5H:5485:5505
1Q81:A2169:A2219
3CD6:02169:02219
3R8S:A1868:A1858
1VQ8:0491:0476
1YHQ:0491:0476
3CPW:0491:0476
3CMA:0491:0476
3OI1:A1145:A1198
2QA4:0491:0476
1K9M:A632:A890
3CCJ:0632:0890
1K8A:A632:A890
3CD6:0491:0476
3CCR:0632:0890
3CCS:0491:0476
3CCS:0632:0890
1QVG:0632:0890
3CME:0632:0890
2QA4:0631:0889
3CCR:0491:0476
2J03:A1145:A1198
2J01:A1145:A1198
3F1H:A2141:A2138
3F1F:A2141:A2138
3F1F:A4:A2876
3F1H:A4:A2876
3CCJ:0184:0413
3CCS:0184:0413
3CCR:0184:0413
1VQM:0184:0413
1VQP:0184:0413
1S72:0184:0413
1VQK:0184:0413
1JJ2:0184:0413
1VQL:0184:0413
3CC7:0184:0413
1VQ9:0184:0413
1YJW:0184:0413
3G6E:0184:0413
3CD6:0184:0413
1FFK:0183:0412
2NZ4:Q46:Q50
3CPW:0184:0413
2OTL:0184:0413
3CC2:0184:0413
3L3C:Q46:Q50
1VQN:0184:0413
1VQO:0184:0413
1VQ8:0184:0413
3CCM:0184:0413
1NJI:A184:A413
1YJN:0184:0413
2NZ4:R46:R50
3CME:0184:0413
3CCV:0184:0413
3CC4:0184:0413
2OTJ:0184:0413
1M90:A184:A413
1YHQ:0184:0413
1VQ4:0184:0413
3CCQ:0184:0413
1VQ7:0184:0413
1YI2:0184:0413
1Q82:A184:A413
1YIT:0184:0413
3L3C:R46:R50
3CCE:0184:0413
1YIJ:0184:0413
1Q81:A184:A413
1VQ5:0184:0413
1N8R:A184:A413
3G71:0184:0413
3CCL:0184:0413
1VQ6:0184:0413
3CCU:0184:0413
1QVG:0184:0413
3CMA:0184:0413
3I56:0184:0413
2NZ4:P46:P50
2NZ4:S46:S50
2QEX:0184:0413
1Q86:A184:A413
1K9M:A184:A413
1KD1:A184:A413
1K8A:A184:A413
2OTL:01335:0824
1YJ9:0184:0413
3G9C:P46:P50
3CXC:0184:0413
2QA4:0184:0413
1YJN:924:91
1YJ9:924:91
3L3C:S46:S50
3I56:924:91
3L3C:P46:P50
1N8R:A1335:A824
3G9C:Q46:Q50
3CC7:01335:0824
1KD1:A1335:A824
3G9C:R46:R50
3G9C:S46:S50
1K8A:A1335:A824
1K9M:A1335:A824
3G8T:P46:P50
1YIT:924:91
3CD6:924:91
3U5F:6260:6127
1YIJ:924:91
3R8S:A767:A1372
3CCJ:924:91
2ZJR:X702:X1294
3CCU:924:91
3R8T:A767:A1372
3U5D:12344:12266
2J00:A265:A242
2J02:A265:A242
3V7E:C68:C65
2ZJR:X1566:X1203
3KNK:A1587:A1242
2J03:A1588:A1237
2J01:A1588:A1237
3OH7:A1588:A1237
3OH5:A1588:A1237
3OI1:A1588:A1237
3OHJ:A1588:A1237
3OHK:A1588:A1237
3OHZ:A1588:A1237
3F1F:A1666:A1307
3F1H:A1666:A1307
2QA4:01812:01831
3F1F:A1802:A1821
3F1H:A1802:A1821
2J01:A1724:A1743
1FFK:01766:01785
3CCL:01813:01832
Closest classifer groups: show all      show selected
Group Members RMSD
bp/WS_tran 12 0.242
bp/WH_tran 597 0.706
bp/HW_tran 597 0.706
bp/SS_cis 840 0.783
base-ribose/SW_2BR 1723 0.861
base-phosphate/W_4BPh 2547 0.951
special/HS_tran 1 1.023
special/SH_tran 1 1.023
bp/SW_tran 57 1.148
special/HS_cis 1 1.267

Extra

PDB:download
Reference image (generated by PyMOL):
pymol image
show in jmol
All members (generated by PyMOL):
pymol image
show in jmol