ClaRNA

Doublet Group info: classifier/base-phosphate/H_0BPh/UA

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: base-phosphate
Desc: H_0BPh/UA
Sub-clusters:
count: 10     show
H_0BPh/UA/sub-001
H_0BPh/UA/sub-002
H_0BPh/UA/sub-003
H_0BPh/UA/sub-004
H_0BPh/UA/sub-005
H_0BPh/UA/sub-006
H_0BPh/UA/sub-007
H_0BPh/UA/sub-008
H_0BPh/UA/sub-009
H_0BPh/UA/sub-010
Members:
count: 39
download members
2QA4:01582:01583
1B23:R43:R9
2ZJR:X588:X589
3IAB:R11:R10
2ZJR:X476:X477
3CCV:0822:02457
2UUA:A1254:A1255
2BX2:R2:R3
3OGY:A77:A78
3OGE:A77:A78
3R8T:A1387:A1388
2GOZ:A29:A30
3R8S:A450:A452
1VQ9:0445:0447
1VQL:0445:0447
1VQM:0445:0447
1VQN:0445:0447
1JJ2:0445:0447
3CC2:0445:0447
1VQ8:0445:0447
1S72:0445:0447
2OTL:0445:0447
3G6E:0445:0447
1YHQ:0445:0447
1VQP:0445:0447
1VQK:0445:0447
3CC4:0445:0447
1VQO:0445:0447
3CPW:0445:0447
2OTJ:0445:0447
1M90:A445:A447
1VQ4:0445:0447
3I56:0445:0447
1YIT:0445:0447
3CCM:0445:0447
1NJI:A445:A447
3G71:0445:0447
1YI2:0445:0447
3CCL:0445:0447
Closest classifer groups: show all      show selected
Group Members RMSD
stacking/<< 2862 0.262
stacking/>> 891 0.266
stacking/>< 511 0.430
base-ribose/W_6BR 214 1.164
base-ribose/H_0BR 495 1.717
base-ribose/W_4BR 362 1.797
base-ribose/W_3BR 156 1.884
base-phosphate/H_9BPh 376 1.932
bp/HS_cis 1 2.381
base-ribose/H_7BR 163 2.391

Extra

PDB:download
Reference image (generated by PyMOL):
pymol image
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All members (generated by PyMOL):
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show in jmol