sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1G2E-B7-B6
X
>1FXL-B6-B5
X
>1B7F-Q9-Q8
X
>3U5F-6258-6257
X
>2QA4-0818-0817
X
>1K8A-A819-A818
X
>1YJN-0819-0818
X
>1VQ5-0819-0818
X
>1NJI-A819-A818
X
>1YJ9-0819-0818
X
>1YI2-0819-0818
X
>1M90-A819-A818
X
</seq>
<hsp>
0 1:0.137167269056
0 2:0.520763555879
0 3:0.648678899928
0 4:0.977515737122
0 5:0.776300106449
0 6:0.821274327616
0 7:0.811108279181
0 8:0.728461789841
0 9:0.840384431598
0 10:0.79328516987
0 11:0.755753453696
1 2:0.508413163267
1 3:0.664933285354
1 4:0.964933432473
1 5:0.777005024795
1 6:0.831726469467
1 7:0.796306051328
1 8:0.731538852134
1 9:0.828886903774
1 10:0.774515193644
1 11:0.741526726254
2 3:0.868222214964
2 4:0.999995069333
2 5:0.713582065953
2 6:0.747939227936
2 7:0.764815009317
2 8:0.646576942527
2 9:0.801208591852
2 10:0.760836054685
2 11:0.717536575523
3 4:0.757004349622
3 5:0.715270985819
3 6:0.613401159973
3 7:0.676647430951
3 8:0.600981988442
3 9:0.661598282111
3 10:0.598611249829
3 11:0.575778959736
4 5:0.573440804252
4 6:0.454269678597
4 7:0.402692407645
4 8:0.566101761759
4 9:0.371553027601
4 10:0.448031299468
4 11:0.45899611904
5 6:0.264079841027
5 7:0.247432219758
5 8:0.179504863603
5 9:0.231062085867
5 10:0.260299585578
5 11:0.25210226406
6 7:0.260341408499
6 8:0.185149168545
6 9:0.196262427835
6 10:0.249076526077
6 11:0.216227130069
7 8:0.241256249884
7 9:0.133340816422
7 10:0.130952253294
7 11:0.195997868848
8 9:0.240817964501
8 10:0.206675478996
8 11:0.18434199042
9 10:0.156260180755
9 11:0.177413157107
10 11:0.114818185261
</hsp>