ClaRNA

Doublet Group info: classifier/base-ribose/W_5BR/GG

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: base-ribose
Desc: W_5BR/GG
Sub-clusters:
count: 11     show
W_5BR/GG/sub-001
W_5BR/GG/sub-002
W_5BR/GG/sub-003
W_5BR/GG/sub-004
W_5BR/GG/sub-005
W_5BR/GG/sub-006
W_5BR/GG/sub-007
W_5BR/GG/sub-008
W_5BR/GG/sub-009
W_5BR/GG/sub-010
W_5BR/GG/sub-011
Members:
count: 121
download members
3OI1:A838:A2276
3OHZ:A838:A2276
3F1F:A850:A2430
3F1H:A850:A2430
3R8S:A829:A2439
3OHK:A838:A2276
3OHJ:A838:A2276
3OH7:A838:A2276
3R8T:A829:A2438
3OH5:A838:A2276
2J01:A838:A2323
2J03:A838:A2323
3KNK:A837:A2351
3R8S:A2818:A2815
3R8T:A2817:A2814
1KD1:A184:A414
1Q82:A184:A414
3CCV:0184:0414
3CXC:0184:0414
1K8A:A184:A414
1K9M:A184:A414
1VQO:0184:0414
1M90:A184:A414
1VQ4:0184:0414
3CCU:0184:0414
1N8R:A184:A414
3CMA:0184:0414
3CC4:0184:0414
1QVG:0184:0414
3CCQ:0184:0414
3I56:0184:0414
3G71:0184:0414
2VQE:A663:A681
3R8O:A1336:V29
3KNH:Y55:Y17
3R8O:A1013:A986
3R8S:A1943:A1947
3OI1:A1866:A1870
3OHZ:A1866:A1870
3U5F:6828:6224
3F1F:A1129:A1066
3F1H:A1129:A1066
3CD6:01173:01110
3CCR:01173:01110
1YJW:01173:01110
3CC7:01173:01110
3V7E:C18:C34
1YJN:01173:01110
3CME:01173:01110
3CMA:0925:0990
1VQL:01173:01110
3FTM:A4:B6
2QEX:01173:01110
3FTM:C4:D6
1YJN:01955:01917
3CC4:01955:01917
3G71:01955:01917
1VQN:01955:01917
3CCU:01955:01917
1YIT:01955:01917
3G6E:01955:01917
3CPW:01955:01917
3CD6:01955:01917
1YIJ:01955:01917
1YI2:01955:01917
3CCV:01955:01917
3CCE:01955:01917
3CCQ:01955:01917
3CCL:01955:01917
1YJW:01955:01917
3OI1:A2320:A2288
3OHZ:A2320:A2288
3OHK:A2320:A2288
3OH7:A2320:A2288
3OH5:A2320:A2288
3OHJ:A2320:A2288
3R8S:A2483:A2451
3U5D:12548:12403
3U5H:52549:52404
2QA4:02302:02161
1K8A:A2303:A2162
3CMA:02303:02162
3CCE:02303:02162
1VQO:02303:02162
1VQ4:02303:02162
1VQP:02303:02162
1K9M:A2303:A2162
1VQM:02303:02162
1Q81:A2303:A2162
3I56:02303:02162
1S72:02303:02162
1Q86:A2303:A2162
3CXC:02303:02162
1JJ2:02303:02162
1YI2:02303:02162
3CC7:02303:02162
1VQL:02303:02162
1M90:A2303:A2162
1VQ6:02303:02162
1YIJ:02303:02162
3G71:02303:02162
1YJ9:02303:02162
1YJN:02303:02162
3G6E:02303:02162
1NJI:A2303:A2162
3CCM:02303:02162
1VQ7:02303:02162
3CCU:02303:02162
1VQN:02303:02162
1VQ5:02303:02162
3CC2:02303:02162
1YHQ:02303:02162
3CCL:02303:02162
3CC4:02303:02162
1QVG:02303:02162
1YIT:02303:02162
3CCV:02303:02162
1VQK:02303:02162
2OTJ:02303:02162
1VQ9:02303:02162
3KNI:A838:A2351
Closest classifer groups: show all      show selected
Group Members RMSD
stacking/<> 530 0.428
stacking/>> 2466 1.294
stacking/<< 2862 1.331
bp/WW_tran 122 1.577
base-phosphate/H_9BPh 376 1.869
base-ribose/W_5BR 216 1.996
bp/WH_tran 14 2.020
bp/HW_tran 14 2.020
bp/WW_cis 18877 2.060
bp/WH_cis 1 2.206

Extra

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Reference image (generated by PyMOL):
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All members (generated by PyMOL):
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