ClaRNA

Doublet Group info: classifier/base-ribose/W_5BR/GU

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: base-ribose
Desc: W_5BR/GU
Sub-clusters:
count: 9     show
W_5BR/GU/sub-001
W_5BR/GU/sub-002
W_5BR/GU/sub-003
W_5BR/GU/sub-004
W_5BR/GU/sub-005
W_5BR/GU/sub-006
W_5BR/GU/sub-007
W_5BR/GU/sub-008
W_5BR/GU/sub-009
Members:
count: 214
download members
3U5D:13061:13058
3U5H:53062:53059
3L3C:Q134:Q69
3KNH:A1106:A1103
3L3C:S134:S69
2CT8:C17:C55
2NZ4:P134:P69
2H0Z:B32:B103
3L3C:P134:P69
2NZ4:S134:S69
3B4B:B32:B103
2HO7:B32:B103
3G9C:R134:R69
3AM1:B35:B32
3G9C:Q134:Q69
3KNK:A2062:A2059
3U5B:2711:2692
3OH7:A44:A112
3OH5:A44:A112
3R8T:A50:A119
3OHZ:A44:A112
3OI1:A44:A112
3OHJ:A44:A112
3OHK:A44:A112
2QEX:037:0105
1Q81:A37:A105
1VQM:037:0105
1VQN:037:0105
1VQ8:037:0105
1VQP:037:0105
3G71:037:0105
1VQL:037:0105
1FFK:037:0105
3CCU:037:0105
1VQO:037:0105
3CC7:037:0105
3CMA:037:0105
1Q82:A37:A105
3CCL:037:0105
3CD6:037:0105
1VQK:037:0105
3CCV:037:0105
3CPW:037:0105
1YIT:037:0105
1YHQ:037:0105
1VQ9:037:0105
3CCS:037:0105
3CC4:037:0105
1N8R:A37:A105
1K8A:A37:A105
2OTL:037:0105
3CXC:037:0105
1K9M:A37:A105
3CC2:037:0105
1M90:A37:A105
1NJI:A37:A105
1YI2:037:0105
3CCE:037:0105
1YJN:037:0105
3CCM:037:0105
3CCQ:037:0105
3G6E:037:0105
1S72:037:0105
1VQ4:037:0105
1VQ5:037:0105
1JJ2:037:0105
1YIJ:037:0105
2OTJ:037:0105
3CME:037:0105
1VQ7:037:0105
1QVG:037:0105
1KD1:A37:A105
1YJ9:037:0105
3CCR:037:0105
1Q86:A37:A105
1VQ6:037:0105
3I56:037:0105
1YJW:037:0105
1QVG:02019:02448
1YJW:02019:02448
2OTL:02019:02448
1FFK:01972:02401
1YJN:02019:02448
1YJ9:02019:02448
3CXC:02019:02448
1YIT:02019:02448
1S72:02019:02448
1FG0:A10:A439
1NJI:A2019:A2448
3CCS:02019:02448
1N8R:A2019:A2448
1Q82:A2019:A2448
1VQ5:02019:02448
3CCE:02019:02448
1JJ2:02019:02448
1VQ4:02019:02448
1YI2:02019:02448
2OTJ:02019:02448
1VQ6:02019:02448
3CPW:02019:02448
3CCM:02019:02448
1Q86:A2019:A2448
3CCJ:02019:02448
1KD1:A2019:A2448
1M90:A2019:A2448
1YIJ:02019:02448
3CME:02019:02448
3I56:02019:02448
1VQP:02019:02448
3CC2:02019:02448
3CCV:02019:02448
1K8A:A2019:A2448
1VQN:02019:02448
1VQL:02019:02448
1K9M:A2019:A2448
1VQK:02019:02448
3CC4:02019:02448
1VQ7:02019:02448
3CCL:02019:02448
2QA4:02018:02447
1VQ9:02019:02448
1VQO:02019:02448
3G6E:02019:02448
1YHQ:02019:02448
3CCU:02019:02448
1VQM:02019:02448
1VQ8:02019:02448
3CC7:02019:02448
3G71:02019:02448
2QEX:02019:02448
3CCQ:02019:02448
1Q81:A2019:A2448
3CD6:02019:02448
3CMA:02019:02448
3CCR:02019:02448
3U5D:12837:12807
3U5H:52838:52808
3F1E:A730:A630
3F1G:A730:A630
3R8O:A492:A436
3R8T:A2216:A2189
3CCR:02103:02088
3CCJ:02103:02088
3R8S:A8:A2622
3I56:02103:02088
2OIU:Q21:Q36
3U5H:52345:52266
3U5D:11482:11497
3CCQ:02103:02088
1VQ5:02103:02088
3R8S:A2217:A2190
3R8T:A8:A2621
2J03:A2101:A2084
3G71:02103:02088
2OTJ:02103:02088
3OHJ:A2054:A2037
1VQ7:02103:02088
3OHK:A2054:A2037
2J01:A2101:A2084
1YJW:02103:02088
3OH7:A2054:A2037
3OH5:A2054:A2037
3CCS:02103:02088
1YJ9:02103:02088
3I2R:B19:C10
3CCL:02103:02088
1Q86:A2103:A2088
1VQ6:02103:02088
3CCV:02103:02088
3OI1:A2054:A2037
2BCZ:C6:D10
3OHZ:A2054:A2037
1YIT:02103:02088
3G6E:02103:02088
1Q81:A2103:A2088
3CCU:02103:02088
1ZFV:C6:D10
1YJN:02103:02088
3CD6:02103:02088
3CC7:02103:02088
1JJ2:02103:02088
1M90:A2103:A2088
3GS8:C6:D10
1N8R:A2103:A2088
3GS5:C6:C27
1NJI:A2103:A2088
3CPW:02103:02088
1K9M:A2103:A2088
2FGP:C6:D10
1KD1:A2103:A2088
3GS1:C6:D10
1K8A:A2103:A2088
3CC4:02103:02088
2OTL:02103:02088
3CCE:02103:02088
1S72:02103:02088
3I2S:B19:C10
1YI2:02103:02088
1VQ9:02103:02088
2QEX:02103:02088
1VQ4:02103:02088
1VQO:02103:02088
1VQP:02103:02088
2D2L:C6:D10
1YIJ:02103:02088
1VQN:02103:02088
1VQK:02103:02088
1VQL:02103:02088
1VQ8:02103:02088
1YHQ:02103:02088
1VQM:02103:02088
3CC2:02103:02088
3CMA:02103:02088
3CCM:02103:02088
Closest classifer groups: show all      show selected
Group Members RMSD
stacking/<< 11557 0.269
stacking/>< 987 0.404
stacking/>> 18546 0.673
base-ribose/W_5BR 121 0.727
base-ribose/W_4BR 362 0.758
base-ribose/H_0BR 590 1.157
base-ribose/W_3BR 156 1.208
base-phosphate/W_5BPh 855 1.226
base-phosphate/H_0BPh 39 1.539
base-phosphate/W_4BPh 1128 1.818

Extra

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Reference image (generated by PyMOL):
pymol image
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All members (generated by PyMOL):
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