ClaRNA

Doublet Group info: classifier/base-ribose/H_0BR/CU

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: base-ribose
Desc: H_0BR/CU
Sub-clusters:
count: 43     show
H_0BR/CU/sub-001
H_0BR/CU/sub-002
H_0BR/CU/sub-003
H_0BR/CU/sub-004
H_0BR/CU/sub-005
H_0BR/CU/sub-006
H_0BR/CU/sub-007
H_0BR/CU/sub-008
H_0BR/CU/sub-009
H_0BR/CU/sub-010
H_0BR/CU/sub-011
H_0BR/CU/sub-012
H_0BR/CU/sub-013
H_0BR/CU/sub-014
H_0BR/CU/sub-015
H_0BR/CU/sub-016
H_0BR/CU/sub-017
H_0BR/CU/sub-018
H_0BR/CU/sub-019
H_0BR/CU/sub-020
H_0BR/CU/sub-021
H_0BR/CU/sub-022
H_0BR/CU/sub-023
H_0BR/CU/sub-024
H_0BR/CU/sub-025
H_0BR/CU/sub-026
H_0BR/CU/sub-027
H_0BR/CU/sub-028
H_0BR/CU/sub-029
H_0BR/CU/sub-030
H_0BR/CU/sub-031
H_0BR/CU/sub-032
H_0BR/CU/sub-033
H_0BR/CU/sub-034
H_0BR/CU/sub-035
H_0BR/CU/sub-036
H_0BR/CU/sub-037
H_0BR/CU/sub-038
H_0BR/CU/sub-039
H_0BR/CU/sub-040
H_0BR/CU/sub-041
H_0BR/CU/sub-042
H_0BR/CU/sub-043
Members:
count: 623
download members
1VQK:01528:01527
3CC2:01528:01527
1N8R:A1528:A1527
3CCM:01528:01527
3CMA:01528:01527
3CCU:01528:01527
1VQN:01528:01527
1QVG:01528:01527
1VQ4:01528:01527
1VQL:01528:01527
3CXC:01528:01527
1VQ9:01528:01527
1Q82:A1528:A1527
1VQM:01528:01527
1FFK:01481:01480
1K9M:A1528:A1527
1M90:A1528:A1527
1N32:A1279:A1278
1KD1:A1528:A1527
1JJ2:01528:01527
1S72:01528:01527
3KNH:A154:A153
3U5H:51723:51722
3U5D:11717:11716
3F1F:A2139:A2138
3F1H:A2139:A2138
3R2C:R4:R3
3U5H:52513:52512
2VQE:A1505:A1504
2J02:W55:W54
3OI1:A2337:A2336
3OHZ:A2337:A2336
3R8T:A1338:A1337
3OHK:A2337:A2336
3F2Q:X42:X41
3AKZ:H53:H52
3R8S:A1338:A1337
2UXC:A818:A817
2J02:A81:A80
2J00:A81:A80
3F1G:A818:A817
3F1E:A818:A817
3F4H:X42:X41
1FJG:A1258:A1257
3KNK:A1088:A1087
2J01:A2174:A2173
2VQF:A818:A817
2J00:A42:A355
1XMQ:A1253:A1252
1UVN:F2:F1
2ZJR:X2084:X2083
3OGY:A81:A80
2UUB:A1258:A1257
3OGE:A81:A80
3OI0:A81:A80
2UXC:A1258:A1257
3KNH:X61:X60
1N32:A1258:A1257
2ZJR:X338:X337
3U5H:51925:51888
2HW8:B16:B15
2UUA:A1258:A1257
1I6U:D18:D17
2QEX:02177:02176
1FFK:02130:02129
3CME:02177:02176
3CCM:02177:02176
2DRB:B19:B18
3CMA:02177:02176
1M90:A2177:A2176
1N8R:A2177:A2176
3CCE:02177:02176
3CCQ:02177:02176
1K8A:A2177:A2176
3CPW:02177:02176
1QVG:01088:01087
3G6E:02177:02176
1QVG:02177:02176
3F2Q:X72:X71
1VQ9:02177:02176
3F2T:X72:X71
1Q82:A2177:A2176
2QA4:02176:02175
1VQM:02177:02176
3CC2:02177:02176
3CC4:02177:02176
3G71:02177:02176
1VQ8:02177:02176
2OTJ:02177:02176
1YJW:02177:02176
1VQL:02177:02176
1JJ2:02177:02176
3CXC:02177:02176
1YHQ:02177:02176
3CC7:02177:02176
1YJN:01088:01087
1Q81:A2177:A2176
1YIT:01088:01087
1YI2:01088:01087
1NJI:A2177:A2176
2BH2:D25:D24
3CCL:02177:02176
3CCJ:02177:02176
1K9M:A2177:A2176
1Q86:A2177:A2176
1VQ5:02177:02176
3CCR:02177:02176
1VQK:02177:02176
1VQO:02177:02176
1VQ7:02177:02176
3I56:02177:02176
2YIE:Z19:Z18
3F4H:Y19:Y18
3CCV:02177:02176
3OHJ:A1447:A1446
3OHK:A1447:A1446
1YHQ:01088:01087
1YJN:02177:02176
1YIJ:02177:02176
3I56:01088:01087
2QEX:01088:01087
1GAX:D59:D58
1VQ8:01088:01087
3CCV:01088:01087
3CD6:02177:02176
1VQ6:02177:02176
1EFW:D61:D60
3CME:01088:01087
1EC6:D12:D11
2QA4:02088:02087
1VQ4:02177:02176
1YJ9:02177:02176
3F2T:X24:X23
1VQ4:01088:01087
3CC4:01088:01087
3CMA:01088:01087
2ZH3:B19:B18
2TRA:A59:A58
3U5D:12906:12905
2ZJR:X177:X176
1ASY:R59:R58
3G71:01088:01087
3KNI:A419:A418
3OVA:C19:C18
3F4H:X24:X23
3U5H:51558:51557
3CCL:01088:01087
1ZHO:F17:F16
2ZHA:B19:B18
3I56:01466:01465
1VQP:02383:02382
2DR8:B19:B18
2ZH4:B19:B18
3AKZ:E58:E57
3KNK:A1352:A1351
2YIE:X24:X23
3G71:01466:01465
3CXC:01466:01465
1F7V:B60:B59
1F7U:B60:B59
1VQM:02383:02382
1Q82:A1466:A1465
1YIT:01466:01465
1J1U:B61:B60
3CCE:01466:01465
3U5H:52419:52418
3CMA:01466:01465
3G6E:02383:02382
1YJ9:01466:01465
3KNK:A419:A418
3CCV:01466:01465
1U0B:A58:A57
1YJW:01466:01465
2OTL:01466:01465
1YJN:01466:01465
1VQ9:01466:01465
3CCS:01466:01465
3CPW:01466:01465
2ZH1:B19:B18
3CCM:01466:01465
2QEX:01466:01465
3CCL:01466:01465
3CCU:01466:01465
1YI2:01466:01465
3D2G:A19:A18
1VQO:01466:01465
3OH7:A2019:A2018
3CCQ:01466:01465
3CC4:01466:01465
3OH5:A2019:A2018
3CC2:01466:01465
2ZH7:B19:B18
1YHQ:01466:01465
1JJ2:01466:01465
2ZH2:B19:B18
3KNH:W46:W45
1S72:01466:01465
1VQP:01466:01465
1VQN:01466:01465
3G78:A36:A35
2CKY:A19:A18
2ZUF:B62:B61
3ADC:D75:D74
3OHJ:A2019:A2018
2ZUE:B62:B61
3OHZ:A2019:A2018
2J03:A1347:A1346
2J01:A1347:A1346
3OHJ:A1347:A1346
3U5D:11798:11797
2CSX:C61:C60
2FMT:D61:D60
3RG5:B73:B72
1VQL:02383:02382
3F1E:A1335:A1334
3F1G:A1335:A1334
3CPW:01197:01196
1VQP:01197:01196
3CC7:01197:01196
1VQN:01197:01196
3CD6:01197:01196
3CMA:01197:01196
3OH7:A915:A914
1VQM:01197:01196
3KNI:B35:B34
2OTJ:01197:01196
3CCS:01197:01196
3G71:01197:01196
1VQ4:01197:01196
3G6E:01197:01196
1YIT:01197:01196
1GTS:B45:B44
3G9C:Q14:Q13
1Q86:A1197:A1196
1K8A:A1197:A1196
1K9M:A1197:A1196
1YI2:01197:01196
1N8R:A1197:A1196
1JJ2:01197:01196
1YIJ:01197:01196
3U5B:2972:2971
1VQ5:01197:01196
1EXD:B37:B36
1YJW:01197:01196
1S72:01197:01196
1M90:A1197:A1196
2F4U:A18:A17
1NJI:A1197:A1196
1VQ6:01197:01196
3CME:01264:01263
1Q29:A6:A5
1ZJW:B45:B44
1Q81:A871:A870
3U5D:1867:1866
3TRA:A65:A64
1K9M:A1264:A1263
2ZJR:X954:X953
3I56:928:927
3KNK:A1153:A1152
3U5F:61703:61702
1YJ9:928:927
3BT7:D12:D11
3F1G:A194:A193
2OTL:928:927
3KNK:B35:B34
3KNI:A1387:A1386
2ZJR:X3:X2
1YJW:928:927
2OTJ:928:927
1M5K:E43:E42
1KD1:B28:B27
1K8A:B28:B27
1M90:B28:B27
3CCL:928:927
1VQ4:928:927
1K9M:B28:B27
1GTR:B61:B60
3CC7:928:927
3TRA:A1:A0
1VQ6:928:927
1QVG:928:927
1VQO:928:927
1VTQ:A1:A0
1Q86:B28:B27
1YIT:928:927
3OH7:A2337:A2336
1JJ2:928:927
1S72:928:927
1NJI:B28:B27
3OI1:A842:A841
1VQK:928:927
3R8O:A1294:A1293
3CC2:928:927
3CCV:928:927
3U5D:1110:1109
1VQ7:928:927
1YJN:928:927
3CPW:928:927
1VQL:928:927
1YI2:928:927
3OH7:A1356:A1355
3TRA:A35:A34
3OHZ:A842:A841
3U5B:21665:21664
3NPQ:C36:C35
1VQ5:928:927
1YIJ:928:927
2QA4:01381:01380
3G6E:928:927
3U5H:5613:5612
1YHQ:928:927
3R8O:A1193:A1192
2NOK:B6:B5
3KNI:A2018:A2017
3KNK:A2018:A2017
2ET3:A18:A17
3NPQ:A36:A35
3R8O:A16:A15
3OGY:A657:A656
3F1H:A1426:A1425
2QA4:02010:02009
3R8O:A88:A87
3OGE:A657:A656
2QA4:0808:0807
3OHY:A194:A193
3OH7:A1242:A1241
3OI0:A194:A193
3OH5:A1242:A1241
3OI1:A1356:A1355
3OI1:A598:A597
1Q81:A809:A808
2QA4:01974:01973
3KNK:A1469:A1468
3CCR:01209:01208
3U5H:5110:5109
3R8S:A790:A789
3KNH:A568:A567
3F1F:A1770:A1769
2ZJR:X2573:X2572
3KNH:A875:A874
3OI0:A13:A12
2ZJR:X849:X848
3KNI:A1248:A1247
1J9H:C4:C3
1J9H:D4:D3
3KNK:A1721:A1720
1J9H:B4:B3
2PXK:B47:B46
1J9H:A4:A3
3ADB:C41:C40
3KNI:A2012:A2011
3CC7:0286:0285
3OHK:A1720:A1719
3F1F:A1798:A1797
3R8T:A1500:A1499
3F1H:A1798:A1797
3OHJ:A1720:A1719
3KNI:A930:A929
2J03:A2392:A2391
3MUT:R23:R22
2J01:A2392:A2391
3F1E:A214:A213
3KNK:A2499:A2498
3F1G:A81:A80
3F1G:A214:A213
3OHC:A194:A193
3OHD:A194:A193
3F1E:A81:A80
3OH7:A1720:A1719
3OH5:A1720:A1719
2QA4:01098:01097
1VQ9:01293:01292
2ZJR:X1442:X1441
1YI2:01293:01292
2ZJR:X1690:X1689
2J03:A822:A821
1Q86:A1293:A1292
3F1G:A1048:A1047
3F1E:A1048:A1047
3CC7:01293:01292
1VQ6:01293:01292
3G71:01293:01292
1YIJ:01293:01292
3F1F:A261:A260
2J00:V51:V50
2J01:A2763:A2762
2J01:A822:A821
3CC4:01293:01292
3CCE:0571:0570
1QVG:01293:01292
1JJ2:01293:01292
3R8T:A1916:A1915
3F1H:A261:A260
3G6E:01293:01292
1VQ7:01293:01292
2UUB:A1403:A1402
3R8S:A1874:A1873
1NJI:A1293:A1292
2ET8:B4:B3
3R8N:A1477:A1476
1YJ9:01293:01292
2BE0:A4:A3
1XMQ:A1397:A1396
1YJW:01293:01292
3ADC:D41:D40
3F1H:A2578:A2577
2J03:A2140:A2139
3OI0:A1048:A1047
3OHY:A1048:A1047
3F1F:A2578:A2577
3I56:01293:01292
1YI2:0601:0600
3F1F:A1523:A1522
3KNK:A2168:A2167
3KNH:A1039:A1038
1I9V:A48:A6
3CCR:01099:01098
3OI0:A812:A811
3OHC:A812:A811
3OHY:A812:A811
2J00:Y14:Y13
3OHD:A812:A811
2VQF:A1040:A1039
3F1H:A1121:A1120
2BEE:A4:A3
2CT8:C32:C31
2VQE:A1040:A1039
3OGE:A812:A811
3OGY:A812:A811
3LA5:A37:A36
2ZJR:Y81:Y80
3R8O:A1061:A1060
3U5F:6780:6779
2VQF:A810:A809
2RE8:B45:B44
1N32:A812:A811
2VQF:A812:A811
3F1G:A812:A811
2UUB:A722:A721
3CCJ:02383:02382
3U5F:61705:61704
2UUB:A812:A811
3CCJ:02138:02136
3KNI:A1839:A1838
1FFK:02091:02089
2ZJR:X1950:X1949
1D4R:B8:B7
3R8S:A1745:A1744
3U5D:4153:4152
1M5O:E43:E42
2UUA:A81:A80
3U5H:52879:52878
2VQF:A81:A80
1N32:A81:A80
1U0B:A42:A41
1VQ6:01766:01765
1FJG:A81:A80
1N32:A1318:A1317
2VQE:A1318:A1317
1XMQ:A1313:A1312
3ADB:D75:D74
3AKZ:H58:H57
3ADD:D73:D72
2ZXU:C60:C59
2ZM5:C60:C59
1YJN:0969:0968
1VQN:02383:02382
3U5H:51804:51803
3ADB:C75:C74
3CME:0969:0968
2BH2:C25:C24
2J00:W60:W59
1Q86:A969:A968
2J03:A2019:A2018
2J01:A2019:A2018
3CC7:0969:0968
3OH5:A1347:A1346
1M5K:B43:B42
3OH7:A1347:A1346
1YJW:0969:0968
3ADC:C71:C70
2QEX:0969:0968
1KD1:A969:A968
1K8A:A969:A968
1QTQ:B45:B44
3CCV:0969:0968
1M90:A969:A968
3CCQ:0969:0968
1K9M:A969:A968
2ZJR:X828:X827
3CCE:01085:01084
1Q81:A969:A968
3KNK:A2345:A2343
2QEX:01197:01196
1S72:0969:0968
1VQK:01197:01196
1JJ2:0969:0968
3I56:01197:01196
1VQ9:01197:01196
3CCL:01197:01196
Closest classifer groups: show all      show selected
Group Members RMSD
base-ribose/H_9BR 531 0.664
bp/HS_cis 1 1.072
bp/SH_cis 1 1.072
bp/WS_tran 22 1.292
bp/SW_tran 22 1.292
bp/HH_cis 51 1.326
stacking/>> 6365 1.368
bp/HH_tran 18 1.375
base-phosphate/H_7BPh 346 1.425
bp/SH_tran 6 1.520

Extra

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Reference image (generated by PyMOL):
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All members (generated by PyMOL):
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