ClaRNA

Doublet Group info: classifier/stacking/<</AC

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: stacking
Desc: <</AC
Sub-clusters:
count: 30     show
<</AC/sub-001
<</AC/sub-002
<</AC/sub-003
<</AC/sub-004
<</AC/sub-005
<</AC/sub-006
<</AC/sub-007
<</AC/sub-008
<</AC/sub-009
<</AC/sub-010
<</AC/sub-011
<</AC/sub-012
<</AC/sub-013
<</AC/sub-014
<</AC/sub-015
<</AC/sub-016
<</AC/sub-017
<</AC/sub-018
<</AC/sub-019
<</AC/sub-020
<</AC/sub-021
<</AC/sub-022
<</AC/sub-023
<</AC/sub-024
<</AC/sub-025
<</AC/sub-026
<</AC/sub-027
<</AC/sub-028
<</AC/sub-029
<</AC/sub-030
Members:
count: 2466
download members
3OHZ:A2372:A2347
3CCJ:02308:0907
1YIT:02308:0907
3G6E:02308:0907
3CPW:02308:0907
3G71:02308:0907
1VQM:02308:0907
3CXC:02308:0907
3CC2:02308:0907
1VQ5:02308:0907
1K8A:A2308:A907
1VQK:02308:0907
3CD6:02308:0907
1Q86:A2308:A907
1K8A:A616:A2017
2EEV:A20:A46
3RW6:H11:H15
3RW6:F11:F15
2UUB:A233:A235
2UUA:A233:A235
2J02:A233:A235
2J03:A1499:A1498
3OGE:A233:A235
3U5F:6413:6411
3R8T:A2885:A2781
2BS1:S5:S3
3OHZ:A1508:A1506
3MQK:E8:E7
3F1G:Y76:Y75
3F1E:Y76:Y75
3OHK:A1508:A1506
1K8A:B43:B41
3CCJ:943:941
3CD6:943:941
3F1E:A311:A310
1VQ6:943:941
3CC2:943:941
1FFK:943:941
3CMA:943:941
2OTJ:943:941
3CCM:0723:0722
1YI2:943:941
1YHQ:943:941
1YJW:943:941
3OGY:A89:A88
1Q86:A585:A584
1YIT:0723:0722
3CCL:943:941
1VQ8:0723:0722
3KNK:A1966:A1965
3CCV:0276:0275
1VQM:01509:01508
1VQ7:01762:01761
2OTJ:01940:01939
1VFG:D4:D3
2UUB:A1221:A1220
1M90:A1940:A1939
3OHZ:A1427:A1426
1JJ2:01509:01508
1YI2:0884:0883
1M90:A1161:A1160
1JJ2:01161:01160
1S72:02329:02328
1K9M:A1161:A1160
3U5H:88:87
3CC4:01940:01939
1K8A:A1161:A1160
3G71:01940:01939
1YIJ:01940:01939
3CCS:01940:01939
3OHC:A311:A310
3F1E:A580:A579
1JJ2:01940:01939
1YHQ:01940:01939
3CCL:01940:01939
3KNK:A905:A904
3R8T:A717:A716
1N8R:A1509:A1508
3F1E:A328:A327
2YDH:A48:A47
3CCR:943:941
1N8R:A1113:A1112
3CCJ:0745:0744
1VQ8:01113:01112
2ZJR:X349:X348
1IVS:C71:C70
1K8A:A1940:A1939
1VQ4:01113:01112
2OTL:01858:01857
1Q82:A366:A365
2J02:A580:A579
3OHC:A1221:A1220
3F1H:A566:A565
1K8A:A1858:A1857
2UXC:A1180:A1179
1YFG:A26:A25
3PDR:A88:A87
1YHQ:02329:02328
3OHJ:A2327:A2326
3CCR:0884:0883
2QA4:02584:02583
3OI0:A1221:A1220
3I56:01940:01939
3F1F:A1200:A1199
3F1H:A1200:A1199
3KNH:A617:A616
3OI0:A592:A591
3G71:094:093
1K8A:A1481:A1480
3U5F:61217:61216
2VQE:A1180:A1179
1KD1:A1481:A1480
2QUS:B50:B49
3G6E:01481:01480
2ZJR:X2205:X2204
1YJW:094:093
1N77:D74:D73
3CCJ:0737:0736
1ZX7:B11:B10
1YJN:01383:01382
1Y6S:A20:A19
3F1H:A1431:A1430
3U5H:51582:51594
3OGE:A1180:A1179
3R8S:A1544:A1543
3CXC:01481:01480
1VQP:01858:01857
3KNI:A32:A31
3F1F:B28:B27
3R8T:A929:A928
3R8T:A1007:A1006
2QA4:01480:01479
3D0X:A35:A34
3F1G:A1087:A1086
3CCM:0429:0428
2ZJR:X804:X803
3KNI:A2729:A2728
3F1E:A1087:A1086
2J01:A2588:A2587
3CMA:0429:0428
1K9M:A429:A428
3KNH:W70:W69
1VQ9:0429:0428
3F1E:A592:A591
1VQ5:02344:02343
3U5D:1425:1424
2ZJR:X2498:X2497
3CCS:0429:0428
3D0U:A160:A159
2OTL:0429:0428
3OHZ:A430:A429
1VQK:0429:0428
3KNK:A1135:A1134
3F1F:A2437:A2436
3R8S:A1073:A1072
3G71:0472:0471
2CV1:C74:C73
3CCJ:0971:0970
2ZJR:X1916:X1915
3CXC:02344:02343
2OTJ:0472:0471
1QVG:0472:0471
2ZZM:B68:B67
3CCV:02344:02343
1IVS:D71:D70
3KNK:A1791:A1790
3CC7:02344:02343
3CC4:0472:0471
2DRB:B34:B33
3CCS:02344:02343
2J03:A430:A429
3F1H:A2045:A2044
3CCL:02344:02343
3CXC:0429:0428
1YJW:01518:01517
3OGY:A724:A723
2QA4:0673:0672
1K9M:A2344:A2343
3KNK:A1581:A1580
3OH5:A2283:A2282
3OGY:A1305:A1304
2J01:A1617:A1616
1N78:C74:C73
1QVG:01712:01711
1VQ5:01712:01711
1FJG:A1244:A1243
2J03:A1617:A1616
3CCM:0243:0242
1Q82:A472:A471
2FMT:C72:C71
1VQ8:02344:02343
2VQF:A1294:A1293
3CME:0472:0471
2UUA:A1294:A1293
3R8S:A225:A224
2UUB:A1244:A1243
1YHQ:02344:02343
2QA4:02007:02006
3U5F:6408:6407
3CCQ:01712:01711
3GS5:A4:A3
1HR2:B115:B114
1VQL:01712:01711
3F1F:A1660:A1659
1VQ7:01712:01711
1Q86:A1769:A1768
2UUA:A1244:A1243
3F1F:A1758:A1757
1M90:A243:A242
1K9M:A243:A242
3CC4:01712:01711
1VQ7:01045:01044
3CCQ:0243:0242
1YIT:01769:01768
3U5F:61230:61229
2QA4:02416:02415
1YJ9:0472:0471
3U5H:51858:51857
1N8R:A1769:A1768
3CD6:01976:01975
1FFK:01665:01664
1VQ4:0472:0471
1VQ6:01769:01768
1NJI:A1712:A1711
3CME:01237:01236
3F1F:A1122:A1121
3OHZ:A1617:A1616
3F1H:A1122:A1121
1YJ9:0971:0970
1Q82:A2106:A2105
3R8S:A2044:A2043
1Q82:A1712:A1711
3R8T:A981:A980
1VQK:01045:01044
3OGY:A599:A598
3SKW:B17:B16
1QVG:0243:0242
1Q86:A971:A970
1Q86:A2008:A2007
3OHK:A2283:A2282
3HL2:E62:E61
1VQ8:01045:01044
1VQL:01823:01822
3L3C:P6:P5
3CPW:01045:01044
1QVG:0971:0970
1VQM:01769:01768
1YIJ:02008:02007
1VQ4:01045:01044
1Q81:A243:A242
1L9A:B117:B116
1M90:A1976:A1975
1VQL:01237:01236
2J03:A1680:A1679
1YIJ:0243:0242
3CCQ:01045:01044
1VQP:01237:01236
3G78:A138:A137
3R8T:A2745:A2744
3CCM:01823:01822
3G6E:01518:01517
1YIJ:01518:01517
3OHJ:A2283:A2282
3OI0:A872:A871
1VQ8:0971:0970
3OHJ:A332:A331
1Q86:A1518:A1517
1YI2:0971:0970
2QEX:0971:0970
3CPW:01769:01768
3CPW:02008:02007
1N8R:A971:A970
3CC2:0243:0242
2OTJ:01045:01044
1VQ9:0539:0538
2J01:A2237:A2236
1YI2:02045:02044
2QEX:02747:02746
1NJI:A2008:A2007
3CCU:02008:02007
3F1G:A498:A497
1YJ9:0177:0176
3OGE:A1087:A1086
1VQ9:01518:01517
1VQK:01769:01768
1VQ4:02747:02746
1VQ6:02008:02007
3CC2:0971:0970
1VQP:01870:01869
1VQP:01769:01768
2VQE:A372:A371
3CCQ:01769:01768
3OH7:A1680:A1679
3F1E:A872:A871
3OI0:A372:A371
1K9M:A971:A970
1YJN:01823:01822
1K8A:A2008:A2007
2GOZ:A26:A25
3CCV:01823:01822
3GX7:A44:A43
1S72:01518:01517
1YHQ:01237:01236
1K8A:A1976:A1975
2VQE:A872:A871
2R8S:R69:R68
1YJ9:01045:01044
1VQO:01769:01768
1YJW:01823:01822
1VQN:0243:0242
3CCQ:02747:02746
1VQM:01937:01936
1YJ9:01823:01822
1VQ5:01937:01936
1VQN:0539:0538
2UUA:A372:A371
1YJN:0243:0242
1KD1:A2008:A2007
3OH5:A332:A331
2UUA:A872:A871
1VQL:01937:01936
1VQL:01870:01869
1VQN:02627:02626
1FFK:01961:01960
1YJN:02747:02746
2J02:A1244:A1243
1QVG:02417:02416
3CCU:02417:02416
2J01:A1792:A1791
3CCV:01237:01236
2J03:A1792:A1791
1VQO:01937:01936
3F1H:A2344:A2343
2VQF:A872:A871
1YHQ:02417:02416
1YI2:01823:01822
1KD1:A1976:A1975
1YIT:0243:0242
1VQP:0539:0538
1VQN:01029:01028
2QEX:0539:0538
1YIJ:02747:02746
1VQL:02627:02626
3CD6:02747:02746
1Q86:A2417:A2416
3CCL:01029:01028
1NJI:A1823:A1822
3CME:0539:0538
2ANN:B8:B7
1VQO:02747:02746
3CCQ:02627:02626
3CD6:02417:02416
3OH5:A2190:A2189
3OHK:A1967:A1966
1YHQ:01937:01936
3CCM:02417:02416
3CCM:0539:0538
3CCV:02417:02416
3MUT:R15:R14
1VQK:02747:02746
1FFK:0538:0537
3CC2:01029:01028
3CC2:01937:01936
1QVG:02627:02626
1VQ7:01823:01822
3CCM:01870:01869
1FFK:01028:01027
3IQR:A44:A43
3CXC:01518:01517
3CME:02417:02416
2OTL:01937:01936
1FFK:02370:02369
3CC4:01237:01236
1NJI:A1237:A1236
1S72:02417:02416
1K9M:A1937:A1936
1VQL:02417:02416
1K8A:A2417:A2416
3I56:01237:01236
3G71:01823:01822
3KNI:A2265:A2264
1YJW:01937:01936
3GCA:A9:A8
1NJI:A1029:A1028
1Q82:A2747:A2746
1S72:02747:02746
1K8A:A1937:A1936
1VQ5:01029:01028
1K9M:A1237:A1236
1VQM:01870:01869
3OI1:A1680:A1679
1VQP:01518:01517
1YJ9:0243:0242
1K8A:A2747:A2746
3U5H:52966:52965
3Q51:A9:A8
1VQ8:02627:02626
2OTL:01823:01822
1YHQ:01029:01028
1Q82:A1237:A1236
1QVG:02644:02643
3CXC:01937:01936
1QVG:01937:01936
3U5D:1563:1562
3R8S:A2220:A2219
3CCV:0539:0538
3R8O:A521:A520
1S72:01937:01936
1YIJ:01823:01822
3D2X:B6:B5
3CC2:0539:0538
1VQ8:01029:01028
1Q82:A1029:A1028
3CCL:01870:01869
1QRU:B73:B72
3OHY:A501:A500
1Q81:A2752:A2751
1M90:A2752:A2751
3Q50:A9:A8
3U5F:6563:6562
3CC7:02752:02751
3OHJ:A2371:A2370
3CCL:02627:02626
3CCR:0249:0248
3OH5:A2371:A2370
1YIT:01937:01936
1XMQ:A1082:A1081
3G6E:01870:01869
3D2V:B6:B5
3OHD:A1087:A1086
3G71:02329:02328
1ZJW:B73:B72
2UUA:A909:A908
1VQ8:01518:01517
1VQN:0249:0248
1YJN:01937:01936
2OTL:01029:01028
2UUA:A1087:A1086
1JJ2:0539:0538
3CC2:02752:02751
2QEX:02752:02751
1N8R:A539:A538
3CCQ:02644:02643
1YHQ:02627:02626
1VQP:0249:0248
2ZJR:X1551:X1550
1EUY:B72:B71
1H4Q:T54:T53
1VQL:02644:02643
2QEX:01237:01236
3CXC:02752:02751
2OTL:02747:02746
3OHY:A909:A908
3CCS:02752:02751
1YJN:02045:02044
1YJ9:01029:01028
3CCS:01237:01236
2J03:A1582:A1581
3CC7:0249:0248
3I56:02752:02751
2OTJ:02752:02751
1VQ4:0249:0248
1FFK:0248:0247
1KD1:A2644:A2643
1Q82:A249:A248
1M90:A249:A248
1K9M:A2644:A2643
1Q86:A2752:A2751
1VQP:02644:02643
1VQN:02752:02751
1F7U:B75:B74
3R8N:A898:A897
1NJI:A1870:A1869
3CCU:0249:0248
3CCQ:02752:02751
1VQ7:01870:01869
3KNH:A363:A362
1VQK:02644:02643
3P59:D5:D4
3CXC:0249:0248
2EZ6:D13:D12
3CCR:0539:0538
1XMQ:A501:A500
3CC2:01870:01869
1FFK:02596:02595
1QTQ:B73:B72
3OHJ:A1582:A1581
1QVG:0249:0248
3CD6:01823:01822
3G6E:02752:02751
2UUA:A758:A757
1YJW:02752:02751
2VQF:A758:A757
3CMA:02752:02751
1Q81:A1045:A1044
3OHZ:A1792:A1791
3CC7:01045:01044
2J02:A872:A871
3CCV:0971:0970
1VQN:02008:02007
Closest classifer groups: show all      show selected
Group Members RMSD
stacking/>> 891 0.102
stacking/<< 2862 0.189
stacking/<> 2555 0.301
base-phosphate/H_0BPh 256 1.311
base-ribose/W_5BR 121 1.409
base-ribose/H_0BR 590 1.626
previously-uncategorized/unknown-0028 354 1.824
previously-uncategorized/neighbours-0022 221 1.994
base-phosphate/H_9BPh 376 2.083
previously-uncategorized/neighbours-0009 352 2.236

Extra

PDB:download
Reference image (generated by PyMOL):
pymol image
show in jmol
All members (generated by PyMOL):
pymol image
show in jmol