ClaRNA

Doublet Group info: classifier/stacking/<</AU

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: stacking
Desc: <</AU
Sub-clusters:
count: 33     show
<</AU/sub-001
<</AU/sub-002
<</AU/sub-003
<</AU/sub-004
<</AU/sub-005
<</AU/sub-006
<</AU/sub-007
<</AU/sub-008
<</AU/sub-009
<</AU/sub-010
<</AU/sub-011
<</AU/sub-012
<</AU/sub-013
<</AU/sub-014
<</AU/sub-015
<</AU/sub-016
<</AU/sub-017
<</AU/sub-018
<</AU/sub-019
<</AU/sub-020
<</AU/sub-021
<</AU/sub-022
<</AU/sub-023
<</AU/sub-024
<</AU/sub-025
<</AU/sub-026
<</AU/sub-027
<</AU/sub-028
<</AU/sub-029
<</AU/sub-030
<</AU/sub-031
<</AU/sub-032
<</AU/sub-033
Members:
count: 891
download members
1YJW:01351:01394
3I56:01351:01394
1VQ7:01351:01394
1VQN:01351:01394
3OI1:A1235:A1278
1VQO:01351:01394
3CCL:01351:01394
3CCQ:01351:01394
1Q86:A1351:A1394
1VQ4:01351:01394
3KNI:A1241:A1284
1VQK:01351:01394
1YJN:01351:01394
1QVG:01351:01394
3CCU:01351:01394
3OH7:A1235:A1278
3CCS:01351:01394
1VQM:01351:01394
1VQ9:01351:01394
1KD1:A1351:A1394
3OH5:A1235:A1278
3U5D:12838:12809
3CPW:01351:01394
1VQ8:01351:01394
3CD6:01351:01394
1YIT:01351:01394
3F1F:A1305:A1348
1K8A:A1351:A1394
1M90:A1351:A1394
3CCR:01351:01394
3F1H:A1305:A1348
3CME:01351:01394
3CXC:01351:01394
1JJ2:01351:01394
2J01:A1235:A1278
2J03:A1235:A1278
2ZJR:X1201:X1244
3U5H:52801:52843
3U5D:12800:12842
3OH7:A2260:A835
1FG0:A137:A143
3U5F:61306:61408
3U5B:21294:21396
3OI1:A2260:A835
3F1F:A2613:A3
3OH7:A1893:A1634
3OHK:A1893:A1634
3OI1:A1893:A1634
3OH5:A1893:A1634
3R8T:A828:A827
3U5H:52131:51875
3KNK:A1892:A1633
3R8S:A828:A827
3CXC:01964:01729
1M90:A1964:A1729
1K9M:A1964:A1729
1JJ2:01964:01729
1FFK:01917:01682
2QEX:01964:01729
3I56:01964:01729
3U5D:12127:11869
1YJ9:01964:01729
2QA4:01963:01728
1Q81:A1964:A1729
2OTJ:01964:01729
3U5D:12204:12625
1K8A:A1964:A1729
3CPW:01964:01729
3CCU:01964:01729
1VQK:01964:01729
3CC4:01964:01729
1YJN:01964:01729
3CCQ:01964:01729
3OHK:A2612:A2610
3G6E:01964:01729
1VQP:01964:01729
3OH5:A2612:A2610
3CCM:01964:01729
3OH7:A2612:A2610
3CMA:01964:01729
1VQM:01964:01729
1VQ9:01964:01729
3CCJ:01964:01729
3R8S:A1970:A1686
2J03:A1893:A1634
3R8N:A241:A243
3OHK:A1344:A1343
3F1F:A1971:A1712
3OHJ:A1344:A1343
3OH7:A1344:A1343
1QVG:01463:01462
3CCJ:01463:01462
3OI1:A1344:A1343
1YJ9:01463:01462
1Q82:A1463:A1462
1K8A:A1463:A1462
1S72:01463:01462
1VQ7:01463:01462
3F1F:A1414:A1413
1NJI:A1463:A1462
1N8R:A1463:A1462
1VQ8:01463:01462
1YHQ:01463:01462
2J01:A2659:A2657
3CXC:01463:01462
2I82:F10:F8
1YIJ:01463:01462
2J03:A1344:A1343
1YI2:01463:01462
2OTL:01463:01462
3R8S:A1388:A1387
1VQ6:01463:01462
3CCU:01463:01462
1VQL:01463:01462
1VQP:01463:01462
3G71:01463:01462
3CPW:01463:01462
3CC4:01463:01462
1VQO:01463:01462
1YIT:01463:01462
1VQ9:01463:01462
1VQ4:01463:01462
1VQN:01463:01462
3CCV:01463:01462
3CMA:01463:01462
3G6E:01463:01462
3I56:01463:01462
1YJN:01463:01462
2I82:E10:E8
2OTJ:01463:01462
1YFG:A36:A34
1YJW:01463:01462
2I82:G10:G8
3CCR:01463:01462
3CCE:01463:01462
3KNI:A1350:A1349
1Q82:A1805:A1804
1K9M:A1805:A1804
3CD6:01805:01804
3U5D:11956:11955
1N8R:A1805:A1804
3U5H:51960:51959
3F1H:A1554:A1553
3F1F:A1554:A1553
2FMT:D38:D36
2RD2:B34:B32
2RE8:B34:B32
1ZJW:B34:B32
1O0C:B34:B32
2FMT:C38:C36
2XD0:H22:H21
1YJN:0617:0607
1VQ5:02278:02277
1YJW:0617:0607
3CMA:0617:0607
1YHQ:0617:0607
1VQ7:02278:02277
1YIT:0617:0607
3CCS:0617:0607
3CCL:0617:0607
3G6E:02278:02277
3CC4:0617:0607
1M90:A2278:A2277
1VQ6:0617:0607
1S72:02278:02277
3G71:02278:02277
3CCE:0617:0607
3CCU:0617:0607
2OTJ:0617:0607
2GDI:X34:X10
3K1V:A18:A19
2GDI:Y34:Y10
2F8S:D11:D10
3R8T:A1257:A1256
3R8O:A1234:A1233
1FFK:02231:02230
3F1F:A2108:A2107
3U5D:1566:1564
1VQM:02373:02372
1F8V:R13:R12
3CCQ:02373:02372
3OHC:A1212:A1211
2QA4:0348:0347
3CCM:02373:02372
1VQO:02373:02372
3U5H:796:795
3PDR:A147:A146
1VQL:02373:02372
3R8S:A1257:A1256
3G6E:02373:02372
3U5B:2144:2143
3U5H:52663:52662
3OGE:A1018:A1017
1VQK:02373:02372
1N8R:A2373:A2372
3U5F:61281:61280
3OGE:A1212:A1211
3CCU:0360:0359
2QA4:02436:02435
3U5B:21326:21325
1M90:A2373:A2372
3OGY:A350:A349
3OHC:A350:A349
1K9M:A2373:A2372
3R8S:A667:A666
3CCR:01245:01244
3OHD:A350:A349
2OTL:02373:02372
1YJN:02373:02372
1YI2:02373:02372
3MUT:R53:R52
1YJW:0360:0359
3KNI:A1957:A1956
1YIJ:02373:02372
1JJ2:02373:02372
1NJI:A2373:A2372
1Q81:A2528:A2527
2F8S:C9:C8
3F1G:Z37:Z36
1YIJ:0266:0265
1VQ6:02373:02372
3NCU:C6:C5
301D:B13:B12
1FFK:02326:02325
3R8T:A202:A201
2BBV:N6:N5
1FFK:02670:02669
3SKW:B59:B58
3G9C:R93:R92
3U5D:1997:1996
3CCL:02373:02372
1VQ9:01140:01139
1FJG:A1445:A1444
3F1G:A350:A349
3R8T:A1366:A1365
1YJN:0266:0265
3I56:01266:01265
3F1E:A350:A349
3SKW:B7:B6
3U5F:6913:6912
3R8N:A286:A285
3R8S:A2527:A2526
3F1H:A2252:A880
1VQP:0360:0359
1XMQ:A973:A972
3CCR:02596:02595
3KNK:A2029:A2028
3F1F:A2706:A2705
3F1H:A2706:A2705
3RKF:A37:A36
3R8O:A593:A592
2J02:V37:V36
2VQE:A973:A972
3CCR:02528:02527
3CCS:0360:0359
3CCS:02596:02595
3U5B:21735:21734
3R8T:A2579:A2578
1YJ9:01140:01139
3G71:01140:01139
300D:B13:B12
3U5H:5552:5551
3U5B:2901:2900
3CCQ:01140:01139
3CCV:01140:01139
3R8O:A165:A164
1N32:A973:A972
1Q86:A1717:A1716
1JJ2:02718:02717
3RKF:C37:C36
3CCL:01140:01139
1YHQ:01140:01139
3F1F:A2036:A2035
3G4M:A37:A36
1N32:A684:A683
2V3C:M83:M82
1VQ5:01140:01139
1K8A:A2718:A2717
3CD6:01140:01139
1VQK:02718:02717
1XMQ:A684:A683
3CC2:01717:01716
1Q86:A2718:A2717
2QEX:01140:01139
1YIT:01717:01716
1S72:02718:02717
1YJW:01717:01716
1YI2:01717:01716
2OTJ:02718:02717
3OHZ:A1734:A1733
3F1F:A2808:A2807
1YIJ:01717:01716
1VQO:02718:02717
3CCM:02718:02717
2Z2Q:R8:R7
3OI1:A1734:A1733
1VQ7:01140:01139
1JJ2:01717:01716
1VQ7:02718:02717
1S72:01717:01716
1VQ5:02718:02717
3U5H:5733:5732
3F1F:A1910:A1909
1Q81:A2718:A2717
1KD1:A1717:A1716
3U5D:12066:12065
1VQP:02718:02717
1VQ9:02596:02595
359D:B13:B12
1VQ8:02596:02595
1YJN:01016:01015
1N8R:A2718:A2717
3MUR:R71:R70
3U5H:5504:5503
1VQL:02718:02717
3F1F:A1117:A1116
3U5B:21537:21536
1YJW:01016:01015
3G71:01016:01015
3F1H:A1117:A1116
1YHQ:02718:02717
1M90:A1717:A1716
3CCQ:01016:01015
1K8A:A1016:A1015
3CXC:02718:02717
3CCE:01717:01716
3OH7:A2552:A2551
3CCU:02718:02717
2OTJ:01717:01716
3OH7:A1734:A1733
2OTL:01717:01716
1Q82:A1717:A1716
3G6E:01717:01716
1VQM:02718:02717
3CCQ:02718:02717
2OTL:01016:01015
2VQF:A973:A972
3OH5:A2552:A2551
3MUT:R71:R70
1GID:B103:B102
1VQ8:02718:02717
3CCU:01717:01716
3F1H:A1812:A1811
1VQ6:02718:02717
3CCR:01717:01716
1N8R:A1717:A1716
3OH7:A1322:A1321
1YIT:01016:01015
1FJG:A684:A683
3CCL:01717:01716
1FFK:01670:01669
1YIJ:01016:01015
1QVG:01016:01015
3CC7:01016:01015
2QA4:01716:01715
3I56:01016:01015
3CD6:01016:01015
2UXC:A973:A972
2QA4:01015:01014
3G6E:02718:02717
3G6E:01140:01139
1Q82:A1016:A1015
3CC7:01140:01139
3U5F:61549:61548
3CCV:01016:01015
1VQ7:01016:01015
1YI2:01016:01015
3CME:01016:01015
1VQ4:02718:02717
3CCE:01016:01015
2QEX:01717:01716
1Q86:A1016:A1015
3OI1:A1322:A1321
1U9S:A26:A25
3U5H:51079:51078
1NJI:A1016:A1015
3CCL:01016:01015
3CCS:01016:01015
3U5D:11073:11072
3CMA:01016:01015
1OOA:C26:C25
1YJ9:02718:02717
1VQ7:01717:01716
3CC4:02718:02717
1YIJ:02718:02717
1VQ6:01717:01716
1VQN:01717:01716
3F1G:V5:V4
1NYI:B12:B11
3CCM:01717:01716
3U5D:11818:11817
1YIT:01140:01139
1VQK:01016:01015
3CCR:01016:01015
1S72:01016:01015
3I56:01140:01139
1YI2:02718:02717
3CME:02718:02717
3F1F:A585:A584
1VQN:01016:01015
1N8R:A1140:A1139
1FXL:B4:B3
3CCS:01717:01716
1JJ2:01140:01139
1VQL:01016:01015
2XLJ:B7:B6
1S72:01140:01139
3F1H:A585:A584
1K8A:A1140:A1139
1NJI:A1140:A1139
3U5D:11350:11349
2QEX:01016:01015
1K9M:A1140:A1139
2QA4:0222:0221
3CXC:01140:01139
3OI1:A576:A575
1M90:A1140:A1139
1VQM:01717:01716
1VQL:01717:01716
3U5D:11581:11580
1Q82:A1140:A1139
3CD6:02718:02717
3CPW:01016:01015
3KNI:A576:A575
1VQK:01717:01716
3OH7:A576:A575
3CMA:01717:01716
3U5H:51356:51355
3OHZ:A576:A575
3CMA:02718:02717
1VQ8:01717:01716
1YIT:02718:02717
3IRW:R53:R52
3CC7:02718:02717
1YJW:02718:02717
3I56:02718:02717
3U5H:52859:52858
3RKF:D37:D36
1VQ9:01717:01716
1QVG:01140:01139
3KNK:A1733:A1732
3CCL:02718:02717
2XLK:D7:D6
1YIT:0222:0221
3CCJ:0222:0221
2XLK:C7:C6
3CCJ:01717:01716
1KD1:A222:A221
3CPW:0222:0221
2OTL:0222:0221
3CME:01717:01716
1N8R:A222:A221
1K9M:A222:A221
3CCU:0222:0221
1YIJ:0222:0221
3CCR:0222:0221
1QVG:0222:0221
1YI2:0222:0221
2QEX:0222:0221
1VQ9:0222:0221
1VQP:0222:0221
3CD6:0222:0221
1VQ8:0222:0221
3CCS:0222:0221
1VQN:0222:0221
1S72:0222:0221
1VQ7:0222:0221
1VQM:0222:0221
1M90:A222:A221
1VQ6:0222:0221
3I56:0222:0221
1YJ9:0222:0221
2QBZ:X139:X138
3CXC:02373:02372
3CCU:02373:02372
1YJW:02373:02372
3CCR:02373:02372
3CCM:01166:01165
3KNI:B103:B102
3CCS:02545:02544
3OWZ:A20:A19
3R8N:A1347:A1346
2QEX:02373:02372
3CCV:02373:02372
1KD1:A2373:A2372
3KNH:A1316:A1315
3CCU:0266:0265
1QVG:02373:02372
3OHY:A1212:A1211
1VQ5:02373:02372
1YJ9:02373:02372
1YIT:02373:02372
1YHQ:02373:02372
3OGE:A350:A349
3CCS:02373:02372
3LRR:C8:C7
3OI0:A350:A349
1Q86:A2373:A2372
3OH5:A1832:A1831
Closest classifer groups: show all      show selected
Group Members RMSD
stacking/>> 891 0.098
stacking/<< 2862 0.114
stacking/<> 2555 0.285
base-phosphate/H_0BPh 256 1.306
base-ribose/W_5BR 121 1.397
base-ribose/H_0BR 590 1.628
previously-uncategorized/unknown-0028 354 1.722
previously-uncategorized/neighbours-0022 221 1.908
base-phosphate/H_9BPh 376 2.110
previously-uncategorized/neighbours-0009 352 2.242

Extra

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Reference image (generated by PyMOL):
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All members (generated by PyMOL):
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