ClaRNA

Doublet Group info: classifier/bp/WS_cis/AU

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: bp
Desc: WS_cis/AU
Sub-clusters:
count: 9     show
WS_cis/AU/sub-001
WS_cis/AU/sub-002
WS_cis/AU/sub-003
WS_cis/AU/sub-004
WS_cis/AU/sub-005
WS_cis/AU/sub-006
WS_cis/AU/sub-007
WS_cis/AU/sub-008
WS_cis/AU/sub-009
Members:
count: 261
download members
1FFK:01076:01074
3KNI:A1975:A815
3CCR:02047:0887
3KNK:A1975:A814
3FU2:C23:C17
3OHY:A1232:A1254
3CCJ:02047:0887
3OI0:A1232:A1254
1YHQ:02047:0887
3CC7:02047:0887
3OH5:A1976:A815
1FFK:02000:0886
3K1V:A21:A15
3I56:02047:0887
3OHZ:A1976:A815
3OH7:A1976:A815
1VQN:02047:0887
3OHD:A1232:A1254
3FU2:A23:A17
3OHC:A1232:A1254
3CXC:02047:0887
3CC4:02047:0887
1VQ9:02047:0887
3OI1:A1976:A815
3G6E:02047:0887
1YI2:02047:0887
1VQ8:02047:0887
1K8A:A2047:A887
1VQL:02047:0887
1YJW:02047:0887
3CD6:02047:0887
3CPW:02047:0887
3CCL:02047:0887
3CCS:02047:0887
1VQO:02047:0887
3CCV:02047:0887
1NJI:A2047:A887
1VQ4:02047:0887
2OTL:02047:0887
3CMA:02047:0887
1VQM:02047:0887
1K9M:A2047:A887
3R8T:A2052:A806
1VQ5:02047:0887
3CC2:02047:0887
3F1F:A2054:A827
3U5H:52213:5889
1YIJ:02047:0887
1Q81:A2047:A887
1VQP:02047:0887
1VQ6:02047:0887
3CCQ:02047:0887
1S72:02047:0887
2OTJ:02047:0887
1VQK:02047:0887
2J03:A1976:A815
1JJ2:02047:0887
3CCU:02047:0887
3F1H:A2054:A827
1VQ7:02047:0887
2ZJR:X1925:X741
3CCE:02047:0887
1YIT:02047:0887
1YJ9:02047:0887
1QVG:02047:0887
2J01:A1976:A815
3G71:02047:0887
1KD1:A2047:A887
3OHJ:A1976:A815
1M90:A2047:A887
1Q86:A2047:A887
2QEX:02047:0887
1Q82:A2047:A887
1YJN:02047:0887
3CME:02047:0887
3OHK:A1976:A815
3FU2:B24:B18
3U5H:5952:51000
3U5D:1946:1994
300D:B6:A9
301D:B6:A9
1N8R:A2047:A887
3CME:01040:0614
3U5H:51103:5593
3R8T:A976:A568
3U5D:11097:1587
3RKF:A50:A46
3R8S:A976:A568
3RKF:B50:B46
3CCU:01040:0614
3KNI:A990:A578
3CCQ:01040:0614
3CC4:01040:0614
3G71:01040:0614
3CCE:01040:0614
1Q81:A1040:A614
3CPW:01040:0614
3CCV:01040:0614
3U5D:11343:46
1VQP:01040:0614
3U5H:51349:86
2OTJ:01040:0614
1VQ9:01040:0614
3CC7:01040:0614
3CMA:01040:0614
3CCJ:01040:0614
299D:B6:A9
3CD6:01040:0614
1VQK:01040:0614
1VQ8:01040:0614
1YHQ:01040:0614
3G6E:01040:0614
3CCS:01040:0614
1VQ5:01040:0614
1VQO:01040:0614
2QBZ:X88:X144
3CCL:01040:0614
1VQL:01040:0614
1Q86:A1040:A614
3OH5:A984:A578
2QEX:01040:0614
1M90:A1040:A614
1NJI:A1040:A614
1VQM:01040:0614
3CCM:01040:0614
1VQ6:01040:0614
1VQ7:01040:0614
1VQN:01040:0614
1VQ4:01040:0614
3U5B:21498:21362
3CC2:01040:0614
1JJ2:01040:0614
2QA4:01039:0614
1S72:01040:0614
3I56:01040:0614
1YIJ:01040:0614
1YIT:01040:0614
2OTL:01040:0614
3OI1:A984:A578
1YJN:01040:0614
3OH7:A984:A578
1YJW:01040:0614
1QVG:01040:0614
1K9M:A1040:A614
1KD1:A1040:A614
3OHZ:A984:A578
1YJ9:01040:0614
1YI2:01040:0614
2VQE:A831:A805
1FFK:01039:0613
2VQF:A831:A805
3U5H:51418:51830
3CCR:01040:0614
1Q82:A1040:A614
2UXC:A831:A805
3U5D:11412:11824
2UUB:A831:A805
1K8A:A1040:A614
3CXC:01040:0614
3OHK:A984:A578
3OGY:A831:A805
3OGE:A831:A805
1N8R:A1040:A614
2J02:A831:A805
3OHJ:A984:A578
2UUA:A831:A805
3PDR:A88:A152
1N32:A831:A805
3CD6:01815:02092
3OI0:A831:A805
3G71:01815:02092
3OHY:A831:A805
1VQN:01815:02092
1XMQ:A831:A805
3F1G:A831:A805
1VQM:01815:02092
1VQ9:01815:02092
3F1E:A831:A805
3CXC:01815:02092
1NYI:B5:A9
1VQ8:01815:02092
3KNH:A822:A796
3PDR:X88:X152
3U5B:2217:2825
1YJW:01815:02092
3CCS:01815:02092
3CCQ:01815:02092
3U5F:61510:61374
1VQK:01815:02092
1Q29:B5:A10
3PDR:A124:A110
3CC4:01815:02092
1VQL:01815:02092
1FJG:A831:A805
2OTJ:01815:02092
1VQP:01815:02092
3CCE:01815:02092
1Q81:A1815:A2092
3CC2:01815:02092
1QVG:01815:02092
1YJ9:01815:02092
1VQO:01815:02092
2QEX:01815:02092
2OTL:01815:02092
1M90:A1815:A2092
3G6E:01815:02092
1YJN:01815:02092
1FFK:01768:02045
3F1H:A1002:A587
3CCJ:01815:02092
3F1F:A1002:A587
3CPW:01815:02092
1VQ4:01815:02092
1S72:01815:02092
3CME:01815:02092
1NJI:A1815:A2092
1N8R:A1815:A2092
1KD1:A1815:A2092
1Q86:A1815:A2092
1K9M:A1815:A2092
1YIT:01815:02092
1Q82:A1815:A2092
1VQ7:01815:02092
1YHQ:01815:02092
1JJ2:01815:02092
1K8A:A1815:A2092
1YIJ:01815:02092
3CMA:01815:02092
1VQ6:01815:02092
1YI2:01815:02092
3I56:01815:02092
3CCU:01815:02092
3KNK:A989:A578
3CCV:01815:02092
1VQ5:01815:02092
3CCM:01815:02092
2QA4:01814:02091
3CC7:01815:02092
3KNK:A2726:A1962
3KNI:A2726:A1962
3CCL:01815:02092
2ZJR:X2606:X1912
3R8O:A372:A388
3HHN:C37:C99
3FU2:B12:B30
2ZJR:X896:X499
2J03:A2698:A1963
2J01:A2698:A1963
3OH5:A2651:A1963
3NPQ:A40:A32
3NPQ:C39:C32
3NPQ:B38:B32
3OH7:A2651:A1963
3F1F:A2805:A2041
3F1H:A2805:A2041
3NPN:A39:A32
3HHN:E37:E99
3OHJ:A2651:A1963
3OHK:A2651:A1963
3OHZ:A2651:A1963
3OI1:A2651:A1963
Closest classifer groups: show all      show selected
Group Members RMSD
bp/SW_cis 783 0.279
bp/HW_cis 144 0.821
bp/WH_cis 144 0.821
bp/WS_tran 12 0.959
bp/SW_tran 12 0.959
bp/WW_cis 32 1.080
bp/WW_tran 670 1.194
bp/WH_tran 684 1.343
base-ribose/W_5BR 83 1.364
bp/HW_tran 4 1.372

Extra

PDB:download
Reference image (generated by PyMOL):
pymol image
show in jmol
All members (generated by PyMOL):
pymol image
show in jmol