sequences=10
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2ZJR-X2340-X2294
X
>2J03-A2430-A2384
X
>2J01-A2430-A2384
X
>3OH7-A1371-A1447
X
>3OH5-A1371-A1447
X
>3OHZ-A1371-A1447
X
>3OI1-A1371-A1447
X
>3R8S-A1415-A1491
X
>3OHJ-A1371-A1447
X
>3OHK-A1371-A1447
X
</seq>
<hsp>
0 1:0.398674542623
0 2:0.427077817016
0 3:0.81691258025
0 4:0.789087717016
0 5:0.994047747166
0 6:1.0
0 7:0.830635819982
0 8:0.884118881704
0 9:0.876232979566
1 2:0.0449737459067
1 3:0.460983854616
1 4:0.439466457293
1 5:0.661306269429
1 6:0.658085186517
1 7:0.495166428164
1 8:0.524916876289
1 9:0.508529415171
2 3:0.447794191871
2 4:0.429360991118
2 5:0.643974432801
2 6:0.63966610176
2 7:0.477811718601
2 8:0.506570954565
2 9:0.48772350331
3 4:0.079025613528
3 5:0.384479512482
3 6:0.361448338489
3 7:0.364952415681
3 8:0.281478684486
3 9:0.261607921077
4 5:0.379084588854
4 6:0.362493110879
4 7:0.336952096762
4 8:0.271524966008
4 9:0.260878102894
5 6:0.0557599521739
5 7:0.402124908818
5 8:0.20109564955
5 9:0.242782167618
6 7:0.400619394345
6 8:0.194136447307
6 9:0.227716897783
7 8:0.259297690081
7 9:0.227647463688
8 9:0.0680879551554
</hsp>