ClaRNA

Doublet Group info: classifier/bp/SW_cis/CA

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: bp
Desc: SW_cis/CA
Sub-clusters:
count: 14     show
SW_cis/CA/sub-001
SW_cis/CA/sub-002
SW_cis/CA/sub-003
SW_cis/CA/sub-004
SW_cis/CA/sub-005
SW_cis/CA/sub-006
SW_cis/CA/sub-007
SW_cis/CA/sub-008
SW_cis/CA/sub-009
SW_cis/CA/sub-010
SW_cis/CA/sub-011
SW_cis/CA/sub-012
SW_cis/CA/sub-013
SW_cis/CA/sub-014
Members:
count: 783
download members
1K8A:A984:A930
1VQ5:0984:0930
3CC2:0984:0930
1JJ2:0984:0930
1Q82:A984:A930
1S72:0984:0930
3CC7:0984:0930
1Q81:A984:A930
3CCE:0984:0930
3OHY:A380:A364
3OI0:A380:A364
3OHY:A1022:A968
3CCM:02237:02306
2QWY:A28:A32
2QWY:B28:B32
3OHC:A380:A364
1F27:A14:B4
3OGE:A380:A364
3OI1:A1282:A1271
3CCJ:01683:01352
3OGY:A380:A364
3R8O:A1147:A1278
2QWY:C28:C32
2J03:A1282:A1271
3R8T:B29:B51
3OHK:B29:B56
3F1F:A1352:A1341
3F1H:A1352:A1341
2J03:B29:B56
2VQE:A1022:A968
3OHK:A1282:A1271
1KD1:A1683:A1352
3U5D:11099:11141
1Y26:X48:X52
3KNI:A1588:A1242
2J01:A1589:A1236
2J03:A1589:A1236
2VQF:A1022:A968
3I56:01683:01352
3CMA:02671:02747
1N8R:A1683:A1352
3F1G:A1022:A968
1K9M:A1683:A1352
3U5H:51105:51147
1YHQ:02671:02747
1VQK:01683:01352
3G71:01683:01352
3F1E:A1022:A968
1VQ8:01683:01352
1K8A:A1683:A1352
3OH7:A1282:A1271
3OH7:B30:B52
1YJW:01683:01352
1VQ4:01683:01352
2OTL:01683:01352
1Q82:A1683:A1352
3OHZ:B30:B52
3OH5:B30:B52
3CCS:01683:01352
1VQK:01042:01083
3CCM:01683:01352
3GOG:A45:A49
3CPW:01683:01352
1VQL:01683:01352
3CD6:01683:01352
2EES:A46:A50
3CCE:01683:01352
1VQN:01683:01352
3FU2:C15:C26
1YIT:01683:01352
3OHK:A1589:A1236
3GAO:A46:A50
3FO6:A46:A50
3OI0:A1126:A1256
1S72:01683:01352
3OHY:A1126:A1256
1JJ2:01683:01352
1YIJ:01683:01352
2QEX:01683:01352
1N8R:A2671:A2747
3CCU:01683:01352
3LA5:A48:A52
3OI1:B29:B56
3CC7:01683:01352
3CCL:01683:01352
1U8D:A46:A50
2XNZ:A45:A49
3GER:A46:A50
3OGE:A1126:A1256
1YJN:01683:01352
3CCR:02671:02747
3G6E:02671:02747
2OTJ:02671:02747
1VQ7:01683:01352
3CCV:01683:01352
3CC4:02671:02747
1VQP:01042:01083
1NJI:A1683:A1352
1VQO:01042:01083
1VQ6:01683:01352
1Q86:A1683:A1352
3GES:A46:A50
1FFK:01636:01305
2ZJR:X1567:X1202
1Q82:A2671:A2747
3CME:929:951
3U5F:6377:6749
3CCQ:01683:01352
1K9M:A2671:A2747
1QVG:02671:02747
3FO4:A44:A48
1VQM:01042:01083
3GOT:A46:A50
3CC7:02671:02747
3CME:01683:01352
1YHQ:01042:01083
3CCE:01042:01083
1FJG:A1022:A968
1Q82:A1042:A1083
3CCR:01683:01352
1VQN:01042:01083
1VQ7:02671:02747
3U5F:6438:6521
3OGE:A304:A46
3CXC:02671:02747
1YJN:01042:01083
3CME:02339:01190
3CC2:01042:01083
3OH7:B29:B56
3OHD:A1126:A1256
3CCS:01042:01083
1VQ9:01042:01083
3OI1:A1589:A1236
1JJ2:01042:01083
3U5D:328:350
1NJI:A2671:A2747
3OHC:A1126:A1256
2OTL:01042:01083
3KNH:A371:A355
1S72:01042:01083
3CCV:02671:02747
2QEX:02671:02747
3CPW:01042:01083
1M90:A2671:A2747
1FFK:02623:02699
1NJI:A1042:A1083
3OGY:A304:A46
1N8R:A1042:A1083
1Q81:A1042:A1083
3KNI:B30:B52
3U5H:52585:51252
1KD1:A1042:A1083
1YI2:01042:01083
3OHY:A1380:A1471
1Q86:A2671:A2747
3CCQ:02671:02747
3OI0:A1380:A1471
2UUA:A380:A364
1K8A:A1042:A1083
3U5D:327:354
3K1V:A13:A24
3R8T:A2708:A1747
3CC7:01042:01083
3OHK:A695:A1705
3CXC:01042:01083
2OTL:02671:02747
3CCR:026:0662
3OGY:A1380:A1471
3F1F:A1667:A1306
3R8S:A2456:A1120
3R8S:B29:B56
3CCU:01042:01083
3I56:01042:01083
3CC4:01042:01083
3R8T:A417:A225
3CCE:02339:01190
3OH7:A1589:A1236
3CCS:02671:02747
3OHD:A1380:A1471
3OH5:A1589:A1236
3G6E:01042:01083
1Q81:A2339:A1190
1VQ6:02671:02747
2VQF:A380:A364
2J03:A2340:A1076
3OHJ:A695:A1705
2QEX:01042:01083
3CCV:02339:01190
1YIJ:02671:02747
1VQ5:01042:01083
3R8T:A2455:A1120
3CCM:02339:01190
1M90:A1042:A1083
1FJG:A1126:A1256
3CCJ:02671:02747
3F1G:A1126:A1256
1K8A:A2339:A1190
3CC7:02339:01190
3F1E:A1126:A1256
1VC0:B21:B42
2VQE:A380:A364
3R8N:A1147:A1278
3CCJ:928:955
3Q51:A14:A26
1Q82:A2339:A1190
1VQ9:02339:01190
1Q81:B28:B55
3CC4:02339:01190
1KD1:A2339:A1190
1K9M:A2339:A1190
3G6E:02339:01190
1FJG:A1380:A1471
1YHQ:02339:01190
3CMA:02339:01190
3G71:02339:01190
3Q50:A15:A27
1NJI:A2339:A1190
1VQK:02339:01190
3OHZ:A695:A1705
1FFK:928:955
3V7E:C29:C92
1VQ4:02339:01190
1VQL:02339:01190
3F1H:A2033:A1151
3CCL:02339:01190
3R8T:B28:B55
3CC2:928:955
2QA4:0764:01793
1YJ9:928:955
1VQ4:02671:02747
1YI2:02339:01190
2OIH:B21:B42
1YJW:928:955
3CCR:02339:01190
2J00:A1380:A1471
3CCJ:01042:01083
1YJW:026:0662
3CCS:02339:01190
3R8S:A2709:A1747
3R8S:A686:A1773
1VC6:B20:B41
1VBY:B21:B42
1YJ9:026:0662
1VQM:02339:01190
1YJW:02339:01190
1JJ2:928:955
2ZJR:X1904:X1045
1S72:928:955
3R8O:A312:A49
1YJN:928:955
3CCE:026:0662
1N8R:B28:B55
3CPW:02339:01190
1VBZ:B21:B42
3U5H:728:750
2QEX:0765:01794
3F1E:A380:A364
2QEX:026:0662
1VQN:02339:01190
1QVG:0765:01794
2QA4:02670:02746
1VQP:02339:01190
1YIT:02339:01190
3CD6:02339:01190
1YIT:026:0662
1VQM:928:955
3F1G:A380:A364
1XMQ:A380:A364
3I56:02339:01190
1QVG:928:955
1VQO:026:0662
3CCM:0765:01794
1S72:0765:01794
3OH7:A1955:A1081
3OHJ:A2293:A1076
3CMA:0765:01794
1VQ4:026:0662
3CPW:0765:01794
3CXC:0765:01794
1K8A:A765:A1794
3CXC:928:955
2UXC:A1126:A1256
1VQ7:026:0662
3CME:928:955
1XMQ:A1121:A1251
2J00:A380:A364
2J02:A380:A364
3GX6:A29:A60
1N8R:A26:A662
1NJI:A26:A662
3CC7:929:951
1N32:A1126:A1256
1VQN:0765:01794
1DRZ:B20:B41
1VQN:929:951
3Q50:A16:A25
3CC2:026:0662
1VQ7:0765:01794
1VQP:026:0662
3U5D:12196:13059
1VQK:0765:01794
1FFK:0764:01747
1K9M:A26:A662
2QA4:02033:02678
1JJ2:026:0662
1S72:026:0662
1YJ9:02034:02679
3U5H:5768:51949
3CXC:02034:02679
3CC7:026:0662
3CD6:02034:02679
3GX7:A29:A60
1VQK:02034:02679
3CCQ:929:951
1VQ8:0765:01794
3OI1:A1955:A1081
3OHZ:A1955:A1081
3CXC:929:951
3CD6:929:951
1VQ8:02034:02679
2QEX:02034:02679
1VQO:02034:02679
3U5D:1762:11945
3I56:929:951
1NJI:A2034:A2679
1Q81:B29:B51
1YHQ:929:951
1VQP:0765:01794
1JJ2:02034:02679
1Q82:A2034:A2679
1VQN:02034:02679
1K9M:B29:B51
1YJN:929:951
1VQL:0765:01794
3GX2:A29:A60
2OTL:02034:02679
3CCM:929:951
1VQL:02034:02679
1VQO:0765:01794
1N8R:B29:B51
3U5H:52200:53060
1VQ5:929:951
1VQ9:929:951
1VQM:02034:02679
1KD1:B29:B51
437D:A14:A22
3G6E:929:951
3GX5:A29:A60
1KD1:A2034:A2679
1VQK:929:951
2QEX:929:951
1N8R:A2034:A2679
1VQL:929:951
1YHQ:02034:02679
1VQ6:929:951
1NJI:B29:B51
3G71:929:951
1M90:A2034:A2679
1VQ7:929:951
1QVG:929:951
2OTL:929:951
1YIJ:02034:02679
3GCA:A16:A25
1YI2:929:951
1VQP:929:951
1K8A:A2034:A2679
3CCJ:929:951
1Q86:A2034:A2679
1YIJ:929:951
1VQ4:02034:02679
1Q86:B29:B51
3G6E:02034:02679
3U5H:5999:5953
1YJW:929:951
3CCL:02034:02679
1VQ5:02034:02679
1YJN:02034:02679
1FFK:01987:02631
1K9M:A2034:A2679
1S72:929:951
3I56:02034:02679
1YIT:02034:02679
1YI2:02034:02679
1Q82:B29:B51
3CCS:929:951
2OTJ:02034:02679
3CCJ:02034:02679
3CCL:929:951
1YJW:02034:02679
3CMA:02034:02679
3FU2:A16:A24
2GIS:A29:A60
3U5D:427:1635
3U5H:827:5641
2ZJR:X458:X459
3KNK:A1287:A1276
3CCV:0984:0930
3FU2:C18:C22
1YI2:0984:0930
3CCL:0984:0930
3CCM:0984:0930
3RW6:H8:H54
1FFK:0983:0929
3CC4:0984:0930
3I56:0984:0930
1YJN:0984:0930
1Q86:A984:A930
3CD6:0984:0930
3CPW:0984:0930
1M90:A984:A930
1YHQ:0984:0930
3F1H:A2630:A2548
1YIT:0984:0930
1KD1:A984:A930
3F1F:A2630:A2548
1YIJ:0984:0930
1VQ7:0984:0930
1YJN:026:0662
1VQO:928:955
2J02:A1380:A1471
1Q82:B28:B55
3I56:928:955
3OH5:A695:A1705
2UUA:A1380:A1471
1Q86:A765:A1794
3R8T:A686:A1773
3OH5:A2293:A1076
3U5D:12584:11246
2UXC:A380:A364
3F1F:A2447:A1146
3I56:02671:02747
3I56:026:0662
1K8A:B28:B55
1FFK:026:0661
1KD1:B28:B55
3CC7:928:955
1YJN:0765:01794
1K9M:B28:B55
3CME:026:0662
3U5D:1993:1947
1YHQ:928:955
1VQP:928:955
2VQE:A1126:A1256
3G71:026:0662
1VQL:928:955
1Q81:A26:A662
3CCL:026:0662
2UUB:A380:A364
3CMA:929:951
1XMQ:A1374:A1465
1YIJ:928:955
1VQ8:928:955
3R8S:B30:B52
3CCU:0765:01794
1YI2:0765:01794
1M90:A765:A1794
2UUB:A1380:A1471
2OTL:026:0662
2OTJ:0765:01794
1KD1:A26:A662
1FJG:A380:A364
3CCJ:0765:01794
3CCQ:928:955
3G6E:026:0662
1VQ7:928:955
1K8A:A26:A662
2QA4:929:951
1VQ5:928:955
1YI2:026:0662
1YIJ:0765:01794
1VQ8:026:0662
3CCE:0765:01794
3CPW:928:955
1Q86:A26:A662
3CCV:0765:01794
3CCS:0765:01794
1VQ5:0765:01794
3IQP:A29:A60
1VQ6:0765:01794
1YHQ:0765:01794
1VQ4:0765:01794
1VQ9:928:955
2OTJ:026:0662
3CC4:026:0662
3F1F:A707:A1783
2UUA:A1126:A1256
2OTL:0765:01794
1VQ6:026:0662
3OHZ:A2293:A1076
3OHJ:A1955:A1081
1Q82:A765:A1794
3CCQ:0765:01794
1YHQ:026:0662
3CCS:026:0662
3CC2:0765:01794
3OH5:A1955:A1081
3G6E:0765:01794
3G71:0765:01794
3CCR:0765:01794
3CCL:0765:01794
Closest classifer groups: show all      show selected
Group Members RMSD
bp/WS_tran 16 0.719
bp/SS_cis 272 0.870
bp/SW_tran 6 1.069
bp/SH_tran 255 1.119
bp/HS_tran 255 1.119
bp/SW_cis 21 1.348
special/SH_tran 1 1.509
special/HS_tran 1 1.509
base-ribose/H_7BR 174 1.526
base-ribose/W_6BR 578 1.894

Extra

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Reference image (generated by PyMOL):
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All members (generated by PyMOL):
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