ClaRNA

Doublet Group info: classifier/base-ribose/W_5BR/UU

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: base-ribose
Desc: W_5BR/UU
Sub-clusters:
count: 8     show
W_5BR/UU/sub-001
W_5BR/UU/sub-002
W_5BR/UU/sub-003
W_5BR/UU/sub-004
W_5BR/UU/sub-005
W_5BR/UU/sub-006
W_5BR/UU/sub-007
W_5BR/UU/sub-008
Members:
count: 129
download members
3KNI:A1352:A1541
3U5D:12293:12290
3R8N:A695:A796
3R8O:A695:A796
3U5F:6166:6285
3U5B:2169:2288
3CME:01339:01989
1Q81:A1339:A1989
2QEX:01339:01989
3CMA:01339:01989
3CPW:01339:01989
1VQL:01339:01989
1VQ5:01339:01989
1N8R:A1339:A1989
1VQ7:01339:01989
1M90:A1339:A1989
1QVG:01339:01989
1VQP:01339:01989
1VQM:01339:01989
1YIT:01339:01989
1VQ9:01339:01989
1Q86:A1339:A1989
1VQ6:01339:01989
3CCJ:01339:01989
3CXC:01339:01989
1VQN:01339:01989
1K9M:A1339:A1989
3CCM:01339:01989
1VQK:01339:01989
1VQO:01339:01989
1VQ8:01339:01989
3I56:01339:01989
1KD1:A1339:A1989
1VQ4:01339:01989
3CCL:01339:01989
3CD6:01339:01989
1K8A:A1339:A1989
3CC2:01339:01989
1Q82:A1339:A1989
3CCS:01339:01989
1YI2:01339:01989
3CC7:01339:01989
3CCV:01339:01989
1NJI:A1339:A1989
1JJ2:01339:01989
3CCQ:01339:01989
1YJ9:01339:01989
1S72:01339:01989
3CCE:01339:01989
1YHQ:01339:01989
3CCU:01339:01989
1YIJ:01339:01989
3CCR:01339:01989
1YJN:01339:01989
2OTJ:01339:01989
2OTL:01339:01989
3G6E:01339:01989
3CC4:01339:01989
1YJW:01339:01989
3G71:01339:01989
2QA4:01338:01988
2DU4:C42:C44
2ZJR:X2383:X1940
3U5D:11349:1890
3U5D:12717:12224
1VQ8:02472:02062
3U5H:52718:52228
3U5H:52093:52121
2J03:A2473:A1991
2J01:A2473:A1991
1FFK:02425:02015
3CCQ:02472:02062
1Q81:A2472:A2062
3G71:02472:02062
3CXC:01926:01954
3U5D:12089:12117
1N8R:A1926:A1954
1VQ6:01926:01954
1YIJ:01926:01954
1YIT:01926:01954
1YJ9:01926:01954
1QVG:01926:01954
1Q82:A1926:A1954
1K9M:A1926:A1954
1Q81:A1926:A1954
3CD6:01926:01954
1FFK:01879:01907
1YJN:01926:01954
1Q86:A1926:A1954
1VQ4:01926:01954
1KD1:A1926:A1954
1YI2:01926:01954
3I56:01926:01954
1K8A:A1926:A1954
3CCV:01926:01954
1M90:A1926:A1954
3CCQ:01926:01954
2OTL:01926:01954
1NJI:A1926:A1954
2OTJ:01926:01954
1YJW:01926:01954
1JJ2:01926:01954
3CCR:01926:01954
1VQ7:01926:01954
1S72:01926:01954
1YHQ:01926:01954
3CC7:01926:01954
1VQN:01926:01954
3G6E:01926:01954
3CCL:01926:01954
3CC2:01926:01954
2QEX:01926:01954
1VQ5:01926:01954
3CCE:01926:01954
1VQ9:01926:01954
3CCU:01926:01954
3CCS:01926:01954
3CPW:01926:01954
1VQL:01926:01954
3G71:01926:01954
3CC4:01926:01954
1VQ8:01926:01954
1VQK:01926:01954
1VQO:01926:01954
1VQP:01926:01954
1VQM:01926:01954
3CME:01926:01954
3CMA:01926:01954
3CCM:01926:01954
Closest classifer groups: show all      show selected
Group Members RMSD
base-phosphate/W_5BPh 430 1.196
bp/HW_cis 34 1.667
bp/WH_cis 34 1.667
base-phosphate/H_7BPh 824 2.042
bp/WW_cis 57582 2.075
base-ribose/W_5BR 75 2.106
bp/HS_cis 1 2.131
base-ribose/W_6BR 214 2.256
bp/SW_cis 10 2.296
bp/HW_tran 3696 2.375

Extra

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Reference image (generated by PyMOL):
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All members (generated by PyMOL):
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