ClaRNA

Doublet Group info: classifier/base-ribose/H_9BR/CA

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: base-ribose
Desc: H_9BR/CA
Sub-clusters:
count: 29     show
H_9BR/CA/sub-001
H_9BR/CA/sub-002
H_9BR/CA/sub-003
H_9BR/CA/sub-004
H_9BR/CA/sub-005
H_9BR/CA/sub-006
H_9BR/CA/sub-007
H_9BR/CA/sub-008
H_9BR/CA/sub-009
H_9BR/CA/sub-010
H_9BR/CA/sub-011
H_9BR/CA/sub-012
H_9BR/CA/sub-013
H_9BR/CA/sub-014
H_9BR/CA/sub-015
H_9BR/CA/sub-016
H_9BR/CA/sub-017
H_9BR/CA/sub-018
H_9BR/CA/sub-019
H_9BR/CA/sub-020
H_9BR/CA/sub-021
H_9BR/CA/sub-022
H_9BR/CA/sub-023
H_9BR/CA/sub-024
H_9BR/CA/sub-025
H_9BR/CA/sub-026
H_9BR/CA/sub-027
H_9BR/CA/sub-028
H_9BR/CA/sub-029
Members:
count: 381
download members
1ZDJ:S4:S2
3D0X:A91:A38
3R8N:A379:A63
5MSF:S8:S6
3OI1:A2040:A2039
3OHZ:A2040:A2039
3U5D:13030:12970
3KNK:A2517:A753
3R8S:A2167:A2164
3R8S:A2048:A573
3R8T:A2047:A573
2J00:V74:V73
3OGY:A1260:A1261
3OGE:A1260:A1261
3R8N:A1282:A1283
2QEX:0526:0524
1VQ4:0526:0524
1VQ5:0526:0524
3CCE:0526:0524
1VQ7:0526:0524
1VQO:0526:0524
1VQ9:0526:0524
2OTJ:0526:0524
3CC2:0526:0524
1Q86:A526:A524
3CC7:0526:0524
1YI2:0526:0524
3CCQ:0526:0524
1YHQ:0526:0524
1YIT:0526:0524
1N8R:A886:A884
1KD1:A526:A524
1VQM:0526:0524
3CCU:0526:0524
1S72:0526:0524
1K8A:A526:A524
1QVG:0526:0524
3CCL:0526:0524
1VQL:0526:0524
1YJ9:0526:0524
1VQK:0526:0524
1JJ2:0526:0524
1VQP:0526:0524
1VQ6:0526:0524
3CCV:0526:0524
3CD6:0526:0524
1NJI:A526:A524
1M90:A526:A524
3EPH:F57:F55
3CMA:0526:0524
2J02:A952:A949
2OTL:0526:0524
3OH7:A1480:A1399
3CCM:0526:0524
1YJW:0526:0524
1YIJ:0526:0524
1N8R:A526:A524
3OH5:A1480:A1399
1Q81:A526:A524
3CXC:0526:0524
1FFK:0525:0523
3CME:0526:0524
1VQ9:01581:01582
3R8O:A523:A521
3G6E:0526:0524
1VQN:0526:0524
2QBZ:X87:X86
3CCS:0526:0524
3CCR:01581:01582
3I56:0526:0524
1Q82:A526:A524
3BNN:A13:A14
1YJN:0526:0524
1VQN:01581:01582
2J03:A1881:A1882
3U5F:6568:6566
2VQE:A503:A501
2J01:A1881:A1882
1K9M:A526:A524
3OHD:A952:A949
3G71:0526:0524
3OHD:A1260:A1261
3OHC:A1260:A1261
2VQF:A503:A501
3OHC:A952:A949
3R8N:A523:A521
3CC4:0526:0524
3CPW:0526:0524
2UXC:A503:A501
3CCJ:01581:01582
3OHK:A382:A381
2UUB:A503:A501
3OHJ:A382:A381
1FJG:A503:A501
3OI0:A503:A501
3OHY:A1260:A1261
3OHY:A503:A501
3CCR:0526:0524
3OI0:A1260:A1261
2OTL:01581:01582
3OHZ:A1480:A1399
3OI1:A1480:A1399
1N32:A503:A501
1XMQ:A503:A501
3OGE:A503:A501
3OGY:A503:A501
3OHC:A503:A501
3OHD:A503:A501
3F1H:A187:A188
3F1F:A187:A188
3OI1:A184:A185
3OHZ:A184:A185
3EPH:E57:E55
2V3C:N55:N52
3U5F:6621:6619
3OI1:A382:A381
3OHZ:A382:A381
2J01:A2679:A2677
2J03:A2679:A2677
2J01:A382:A381
1K8W:B14:B12
1ZL3:B14:B12
2J03:A382:A381
3KNH:X74:X73
3U5H:5667:5701
3U5D:1661:1695
2ZJR:X686:X685
3R8O:A46:A30
2QEX:02742:02741
3U5D:449:447
3CCQ:02742:02741
1YHQ:02742:02741
2OTL:02742:02741
3CCS:02742:02741
3CC2:02742:02741
3G71:02742:02741
1VQ9:02742:02741
3CPW:02742:02741
3CCM:01520:01518
2OTJ:02742:02741
3R8T:A2872:A2871
1VQ8:02742:02741
1FFK:02694:02693
1VQO:02742:02741
1QVG:02742:02741
3CXC:02742:02741
3CMA:02742:02741
3G6E:02742:02741
1Q86:A2742:A2741
1VQK:02742:02741
1VQ9:01520:01518
3CC4:02742:02741
1YJN:02742:02741
3CC7:02742:02741
1VQM:02742:02741
1Q81:A2742:A2741
1VQN:02742:02741
1Q82:A2742:A2741
1VQ6:02742:02741
1VQ4:02742:02741
1VQL:02742:02741
3CCU:02742:02741
1VQ5:02742:02741
1YIT:02742:02741
1VQP:02742:02741
1YJW:02742:02741
3CCE:02742:02741
1KD1:A2742:A2741
1VQ7:02742:02741
1M90:A2742:A2741
1K8A:A2742:A2741
1S72:02742:02741
3CCL:02742:02741
1JJ2:02742:02741
3CME:02742:02741
3CCV:02742:02741
1NJI:A2742:A2741
1N8R:A2742:A2741
1K9M:A2742:A2741
1YI2:02742:02741
3U5H:849:847
1VQO:01520:01518
3CCM:02742:02741
1YIJ:01520:01518
3CCE:01520:01518
1YIJ:02742:02741
3CD6:02742:02741
3G6E:01520:01518
3R8S:A2873:A2872
2OTL:01520:01518
1YJN:01520:01518
3CC4:01520:01518
1YJW:01520:01518
3G71:01520:01518
3MXH:R36:R35
3CC7:01520:01518
3MUM:R36:R35
3I56:01520:01518
3CCL:01520:01518
3IRW:R36:R35
3G9C:Q28:Q27
2J03:A2630:A2628
2J01:A2630:A2628
3R8T:B33:B32
3OI1:A2583:A2581
3OHZ:A2583:A2581
3OH7:A2583:A2581
3OH5:A2583:A2581
3G9C:P28:P27
2NZ4:Q28:Q27
2NZ4:P28:P27
3L3C:S28:S27
3G8T:P28:P27
2NZ4:S28:S27
3L3C:Q28:Q27
3U5D:12736:12734
3L3C:P28:P27
2HO6:B13:B12
3G9C:R28:R27
2NZ4:R28:R27
3L3C:R28:R27
3G9C:S28:S27
3D0U:A37:A35
3R8S:A227:A2400
3F1F:A389:A388
3F1H:A389:A388
1MJI:C9:C8
1U9S:A148:A145
3Q3Z:V64:V63
3R8T:A2490:A2489
1XJR:A38:A37
3OH5:A2328:A2327
3OH7:A2328:A2327
3Q3Z:A64:A63
3OHZ:A2328:A2327
3OI1:A2328:A2327
3GX6:A46:A45
3CCM:02374:02373
3F1F:A2482:A2481
3F1H:A2482:A2481
3OHJ:A2328:A2327
3OHK:A2328:A2327
1VQ4:02374:02373
2QEX:02374:02373
1VQP:02374:02373
1VQL:02374:02373
1VQ5:02374:02373
1VQK:02374:02373
1QVG:02374:02373
1VQM:02374:02373
3GX2:A46:A45
1YJ9:02374:02373
1Q81:A2374:A2373
1VQ8:02374:02373
3CME:02374:02373
3CC7:02374:02373
1YJN:02374:02373
1VQ6:02374:02373
1VQ7:02374:02373
1KD1:A2374:A2373
1FFK:02327:02326
1VQ9:02374:02373
3I56:02374:02373
3CMA:02374:02373
2GIS:A46:A45
1Q86:A2374:A2373
3CCV:02374:02373
2OTL:02374:02373
1NJI:A2374:A2373
2ZJR:X2285:X2284
1YJW:02374:02373
3CPW:02374:02373
1S72:02374:02373
3KNI:A2403:A2402
1VQO:02374:02373
1FG0:A365:A364
1JJ2:02374:02373
1N8R:A2374:A2373
3GX5:A46:A45
1YI2:02374:02373
3R8S:A2491:A2490
3G71:02374:02373
3CC2:02374:02373
1Q82:A2374:A2373
1K9M:A2374:A2373
1K8A:A2374:A2373
1YHQ:02374:02373
2YDH:A46:A45
1VQN:02374:02373
3CC4:02374:02373
1YIJ:02374:02373
3GX3:A46:A45
3G6E:02374:02373
2QA4:02373:02372
3CXC:02374:02373
3CD6:02374:02373
1YIT:02374:02373
2OTJ:02374:02373
3GX7:A46:A45
3CCL:02374:02373
3CCR:02374:02373
2J03:A2375:A2374
3IQR:A46:A45
1U9S:A56:A55
1M90:A2374:A2373
3CCQ:02374:02373
2J01:A2375:A2374
3CCU:02374:02373
3KNK:A2403:A2402
3CCE:02374:02373
3CCS:02374:02373
3CCJ:02374:02373
3V7E:C46:C45
2QA4:01927:01926
3CCJ:01928:01927
3CCR:01928:01927
1VQ9:01928:01927
3CXC:01928:01927
1VQL:01928:01927
1VQP:01928:01927
1QVG:01928:01927
1FFK:01881:01880
1VQM:01928:01927
3CD6:01928:01927
3CCQ:01928:01927
3CCM:01928:01927
3CCS:01928:01927
1VQN:01928:01927
1VQO:01928:01927
1YJW:01928:01927
2OTL:01928:01927
3I56:01928:01927
1VQ4:01928:01927
1VQK:01928:01927
1Q82:A1928:A1927
1YIT:01928:01927
1Q81:A1928:A1927
1YJ9:01928:01927
1VQ8:01928:01927
1Q86:A1928:A1927
3G6E:01928:01927
2OTJ:01928:01927
1YIJ:01928:01927
1K8A:A1928:A1927
1VQ5:01928:01927
1NJI:A1928:A1927
3CCL:01928:01927
1VQ6:01928:01927
1M90:A1928:A1927
1YHQ:01928:01927
2QEX:01928:01927
1N8R:A1928:A1927
1YJN:01928:01927
1VQ7:01928:01927
1S72:01928:01927
3CPW:01928:01927
1K9M:A1928:A1927
3CCU:01928:01927
3CC7:01928:01927
3CC2:01928:01927
1JJ2:01928:01927
1KD1:A1928:A1927
1YI2:01928:01927
3CCV:01928:01927
3CCE:01928:01927
3CME:01928:01927
3CMA:01928:01927
3CC4:01928:01927
3G71:01928:01927
2GCV:B13:B12
2GCS:B13:B12
2H0S:B13:B12
3B4C:B13:B12
2H0W:B13:B12
2H0X:B13:B12
2HO7:B13:B12
3B4A:B13:B12
3B4B:B13:B12
3D0X:A37:A35
3U5H:52737:52735
2H0Z:B13:B12
Closest classifer groups: show all      show selected
Group Members RMSD
bp/HS_cis 56 0.284
bp/SH_cis 56 0.284
bp/HW_tran 1 0.284
bp/WH_tran 1 0.284
bp/HH_tran 216 0.613
special/HH_tran 1 0.764
base-phosphate/W_5BPh 327 0.889
bp/HW_cis 23 0.944
bp/WH_cis 23 0.944
bp/SH_tran 290 1.035

Extra

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Reference image (generated by PyMOL):
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All members (generated by PyMOL):
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