sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8O-A986-A1013
X
>3KNI-A2625-A2775
X
>3KNK-A2625-A2775
X
>2ZJR-X2507-X2655
X
>2J03-A2597-A2747
X
>2J01-A2597-A2747
X
>3OH7-A2550-A2700
X
>3OH5-A2550-A2700
X
>3OHJ-A2550-A2700
X
>3OHK-A2550-A2700
X
>3OI1-A2550-A2700
X
>3OHZ-A2550-A2700
X
</seq>
<hsp>
0 1:0.887867151136
0 2:1.0
0 3:0.949243257922
0 4:0.968657341665
0 5:0.968132539846
0 6:0.945247508986
0 7:0.94375650867
0 8:0.96386087772
0 9:0.962220373845
0 10:0.96622865422
0 11:0.966126081222
1 2:0.193096301888
1 3:0.11110342954
1 4:0.138974577324
1 5:0.136634860756
1 6:0.118260870431
1 7:0.115830632389
1 8:0.118218485899
1 9:0.120240657822
1 10:0.12171932987
1 11:0.113483032078
2 3:0.161699398081
2 4:0.0966819136775
2 5:0.0977670661594
2 6:0.0885166512528
2 7:0.0917245508424
2 8:0.108074663455
2 9:0.101401278874
2 10:0.0900490247529
2 11:0.099664596199
3 4:0.103818458644
3 5:0.100191602742
3 6:0.10821319313
3 7:0.103143446115
3 8:0.0724578287477
3 9:0.0794291859295
3 10:0.0944208270792
3 11:0.083403133717
4 5:0.0049055548033
4 6:0.0636584679651
4 7:0.0637243195087
4 8:0.0729380239253
4 9:0.0788657596853
4 10:0.0733448016234
4 11:0.0708581800035
5 6:0.0623330087499
5 7:0.0620962366628
5 8:0.0696726146088
5 9:0.075835449256
5 10:0.0706386934223
5 11:0.0677647650321
6 7:0.00815649468819
6 8:0.0708468842291
6 9:0.06697692976
6 10:0.061456694424
6 11:0.0614579874996
7 8:0.0692416863562
7 9:0.0659887430865
7 10:0.0601025026453
7 11:0.0587224835991
8 9:0.0176869250156
8 10:0.0510871092757
8 11:0.0460657895476
9 10:0.0453402986408
9 11:0.0452711543132
10 11:0.0187234232287
</hsp>