ClaRNA

Doublet Group info: classifier/base-phosphate/W_6BPh/AU

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: base-phosphate
Desc: W_6BPh/AU
Sub-clusters:
count: 32     show
W_6BPh/AU/sub-001
W_6BPh/AU/sub-002
W_6BPh/AU/sub-003
W_6BPh/AU/sub-004
W_6BPh/AU/sub-005
W_6BPh/AU/sub-006
W_6BPh/AU/sub-007
W_6BPh/AU/sub-008
W_6BPh/AU/sub-009
W_6BPh/AU/sub-010
W_6BPh/AU/sub-011
W_6BPh/AU/sub-012
W_6BPh/AU/sub-013
W_6BPh/AU/sub-014
W_6BPh/AU/sub-015
W_6BPh/AU/sub-016
W_6BPh/AU/sub-017
W_6BPh/AU/sub-018
W_6BPh/AU/sub-019
W_6BPh/AU/sub-020
W_6BPh/AU/sub-021
W_6BPh/AU/sub-022
W_6BPh/AU/sub-023
W_6BPh/AU/sub-024
W_6BPh/AU/sub-025
W_6BPh/AU/sub-026
W_6BPh/AU/sub-027
W_6BPh/AU/sub-028
W_6BPh/AU/sub-029
W_6BPh/AU/sub-030
W_6BPh/AU/sub-031
W_6BPh/AU/sub-032
Members:
count: 410
download members
3OHJ:A2260:A2075
3OH5:A2260:A2075
1K9M:A616:A2376
3OH7:A2260:A2075
1NJI:A616:A2376
1ASZ:S20:S46
1Q86:A616:A2376
1QVG:0616:02376
1K8A:A616:A2376
3U5H:5660:5706
1Q81:A616:A2376
3KNI:A2335:A2150
3CXC:0616:02376
3CPW:0616:02376
1IL2:C20:C46
1M90:A616:A2376
1Q82:A616:A2376
1YJW:0681:0720
2J03:A2591:A2565
2QEX:0681:0720
2QA4:0680:0719
1N8R:A616:A2376
2J01:A2591:A2565
1KD1:A681:A720
1K9M:A681:A720
1Q81:A681:A720
3I56:0681:0720
3R8S:A2423:A2238
3CCV:02653:0521
3CCE:0681:0720
1S72:0681:0720
1K8A:A681:A720
3CCQ:0681:0720
1YJN:0681:0720
2OTJ:02653:0521
3CC2:0681:0720
1QVG:0681:0720
3CCS:02653:0521
1JJ2:0681:0720
1YIT:02653:0521
1VQ6:0681:0720
3CCV:0681:0720
1VQ5:0681:0720
3CCJ:02653:0521
3CCE:02653:0521
1QVG:02653:0521
1VQ7:0681:0720
3CME:02653:0521
1NJI:A681:A720
3CCU:0681:0720
3U5B:2983:21743
1YHQ:0681:0720
2OTJ:0681:0720
1YI2:0681:0720
1M90:A681:A720
1VQ4:02653:0521
1VQ5:02653:0521
2QEX:02653:0521
3CCQ:02653:0521
1Q82:A681:A720
1VQ7:02653:0521
1N8R:A681:A720
3CMA:0681:0720
1YIT:0681:0720
3CC4:02653:0521
2OTL:02653:0521
1YIJ:02653:0521
3F1F:A2698:A2672
3U5D:1654:1700
3G71:02653:0521
3F1H:A2698:A2672
1FFK:0680:0719
1YJ9:0681:0720
1YI2:02653:0521
1YIJ:0681:0720
3CC2:02653:0521
3OHZ:A580:A2330
3CC7:0681:0720
3CME:0681:0720
3CXC:0681:0720
3CCL:0681:0720
1VQ6:02653:0521
2OTL:0681:0720
3CCU:02653:0521
3G6E:02653:0521
1Q86:A2653:A521
1YJW:02653:0521
3CCL:02653:0521
1Q81:A2653:A521
3OI1:A580:A2330
1VQL:02653:0521
1VQ4:0681:0720
3G6E:0681:0720
1YHQ:02653:0521
3CC7:02653:0521
1YJN:02653:0521
1JJ2:02653:0521
3I56:02653:0521
1M90:A2653:A521
3CC4:0681:0720
3R8T:A2422:A2237
1S72:02653:0521
1YJ9:02653:0521
1Q86:A681:A720
3CCM:0681:0720
1VQ9:0681:0720
2ZXU:C35:C32
1VQO:0681:0720
1Q82:A2653:A521
3CCM:02653:0521
1VQN:02653:0521
3CPW:02653:0521
1VQM:02653:0521
1VQK:0681:0720
3CD6:02653:0521
3CXC:02653:0521
1K9M:A2653:A521
1VQ8:0681:0720
3KNI:A580:A2405
1VQN:0681:0720
1NJI:A2653:A521
3CMA:02653:0521
1VQO:02653:0521
1VQP:02653:0521
3CD6:0681:0720
3CCR:0681:0720
1KD1:A2653:A521
1VQ9:02653:0521
1VQK:02653:0521
3CCR:02653:0521
1VQP:0681:0720
1VQL:0681:0720
1K8A:A2653:A521
3CPW:0681:0720
1VQ8:02653:0521
1N8R:A2653:A521
1VQM:0681:0720
1FFK:02605:0520
2QA4:02652:0521
3OI1:A2544:A2518
2ZM5:C35:C32
3EPH:E33:E30
3G71:0681:0720
3FOZ:C35:C32
2J03:A580:A2377
2J01:A580:A2377
3FOZ:D32:D29
1N32:A794:A791
3OHZ:A2544:A2518
1XMQ:A794:A791
3CCJ:0681:0720
2VQE:A794:A791
2VQF:A794:A791
3G78:A118:A63
3CCS:0681:0720
3OHK:A2544:A2518
3KNK:A2619:A2593
3U5B:21009:21006
3OHJ:A580:A2330
3OH5:A2544:A2518
3U5F:61021:61018
3OH7:A2544:A2518
3OHJ:A2544:A2518
3U5H:5595:52622
1FJG:A794:A791
2UUB:A794:A791
3EPH:F33:F30
3F1H:A589:A2484
3F1F:A589:A2484
3U5D:1589:12621
3OGE:A794:A791
3OGY:A794:A791
2UXC:A794:A791
3KNI:A2619:A2593
2UUA:A794:A791
3OHC:A794:A791
2J00:A794:A791
3OHD:A794:A791
2J02:A794:A791
2J00:A758:A779
2UUA:A1232:A1254
3R8N:A814:A811
3R8O:A814:A811
2J02:A758:A779
3OHY:A794:A791
3OI0:A794:A791
3KNK:A1026:A1095
3R8S:A1265:A754
3R8T:A1265:A754
3KNI:A1027:A1096
2VQF:A1232:A1254
2OZB:C19:C16
3R8O:A351:A315
3F1G:A758:A779
3F1E:A758:A779
3F1E:A794:A791
3F1G:A794:A791
3R8O:A904:A889
3R8N:A904:A889
3R8T:A1278:A1322
3OHC:A758:A779
3R8N:A351:A315
3L3C:P41:P58
3OHD:A758:A779
3OHY:A758:A779
3KNH:A749:A770
3OHD:A768:A1470
3OHC:A768:A1470
3OH7:A1021:A1090
3OI0:A758:A779
1N32:A758:A779
2J02:A768:A1470
3L3C:S41:S58
3OH5:A1021:A1090
3OGE:A768:A1470
2ZJR:X1470:X1354
3OGY:A768:A1470
3SLM:A21:A48
3OHK:A1021:A1090
1FJG:A768:A1470
3OHJ:A1021:A1090
3OI0:A768:A1470
1XMQ:A768:A1464
3OHY:A768:A1470
3B4A:B27:B44
2NZ4:P41:P58
3L3C:Q41:Q58
2UUA:A758:A779
2HO6:B27:B44
3B4B:B27:B44
1FJG:A758:A779
2UXC:A758:A779
2GCV:B27:B44
2UUB:A758:A779
1XMQ:A758:A779
3OGE:A758:A779
2NZ4:S41:S58
3OGY:A758:A779
3L3C:R41:R58
3R8O:A788:A1496
2GCS:B27:B44
2H0X:B27:B44
2H0W:B27:B44
2HO7:B27:B44
2UXC:A768:A1470
2VQF:A768:A1470
2VQF:A758:A779
1N32:A768:A1470
2UUB:A768:A1470
2VQE:A758:A779
2NZ4:Q41:Q58
2NZ4:R41:R58
2UUA:A768:A1470
3R8O:A778:A799
3KNH:A759:A1461
2H0Z:B27:B44
2H0S:B27:B44
3G9C:R41:R58
2J01:A1021:A1090
2VQE:A768:A1470
2J03:A1021:A1090
3F1E:A768:A1470
3F1G:A768:A1470
3R8N:A778:A799
3U5F:6995:61755
3G9C:P41:P58
3G9C:Q41:Q58
3R8N:A788:A1496
3KNK:A950:A577
3F1F:A2783:A2781
3F1H:A1787:A1782
3F1F:A1787:A1782
3G9C:R47:Q48
2HOL:A54:A58
3U5F:6433:643
3KNI:A1708:A1703
2ZJR:X1677:X1672
3R8T:A1777:A1772
3U5B:2436:243
3OHJ:A1709:A1704
3OHK:A1709:A1704
3R8S:A1777:A1772
3OH5:A1709:A1704
3OH7:A1709:A1704
2QA4:01797:01792
1Q82:A1798:A1793
1KD1:A1798:A1793
1K8A:A1798:A1793
2J03:A1709:A1704
2J01:A1709:A1704
1N8R:A1798:A1793
1K9M:A1798:A1793
2OTL:01798:01793
1QVG:01798:01793
3R8N:A1143:A1123
1YJ9:01798:01793
3CCJ:01798:01793
3OHZ:A1709:A1704
3OI1:A1709:A1704
3CCS:01798:01793
1NJI:A1798:A1793
1Q86:A1798:A1793
3CCQ:01798:01793
3CCR:01798:01793
3CXC:01798:01793
1JJ2:01798:01793
3I56:01798:01793
3CC2:01798:01793
1YI2:01798:01793
1VQ7:01798:01793
1M90:A1798:A1793
1S72:01798:01793
1VQ4:01798:01793
3CCV:01798:01793
3CCU:01798:01793
1YIJ:01798:01793
3CC7:01798:01793
1YJN:01798:01793
3CD6:01798:01793
1VQ5:01798:01793
3CCL:01798:01793
2QEX:01798:01793
1VQ6:01798:01793
1YJW:01798:01793
3CCE:01798:01793
1FFK:01751:01746
1YIT:01798:01793
3G71:01798:01793
1YHQ:01798:01793
3G6E:01798:01793
3CC4:01798:01793
1Q81:A1798:A1793
1VQ9:01798:01793
3CCM:01798:01793
2OTJ:01798:01793
3CPW:01798:01793
1VQN:01798:01793
1VQL:01798:01793
1VQK:01798:01793
1VQM:01798:01793
1VQ8:01798:01793
1VQO:01798:01793
1VQP:01798:01793
3CME:01798:01793
3CMA:01798:01793
3U5F:61577:61606
3U5B:21565:21594
3CCR:0501:0476
3CCE:0501:0476
3CCQ:0501:0476
3G6E:0501:0476
3CCS:0501:0476
3G71:0501:0476
1FFK:0500:0475
3CCL:0501:0476
1YJ9:0501:0476
3CCU:0501:0476
1VQ4:0501:0476
3CCV:0501:0476
1VQ7:0501:0476
1VQ6:0501:0476
1Q81:A501:A476
1VQ5:0501:0476
2OTJ:0501:0476
1QVG:0501:0476
3CC7:0501:0476
1Q86:A501:A476
1YJN:0501:0476
3CD6:0501:0476
1YIJ:0501:0476
3CXC:0501:0476
1KD1:A501:A476
2OTL:0501:0476
1K9M:A501:A476
1K8A:A501:A476
3I56:0501:0476
1Q82:A501:A476
1M90:A501:A476
3CC4:0501:0476
1JJ2:0501:0476
1NJI:A501:A476
1N8R:A501:A476
1S72:0501:0476
1YJW:0501:0476
1YI2:0501:0476
1YIT:0501:0476
2UXC:A765:A771
1XMQ:A765:A771
1FJG:A765:A771
3KNK:A2335:A2150
1ASY:R20:R46
2TRA:A20:A46
3AKZ:F19:F45
3KNK:A580:A2405
2J03:A2307:A2122
2BH2:C6:C11
3OHZ:A2260:A2075
2J01:A2307:A2122
3OI1:A2260:A2075
2BH2:D6:D11
2ZJR:X501:X2287
1FFK:0615:02329
1KD1:A616:A2376
1JJ2:0616:02376
3OHK:A2260:A2075
3F1H:A2783:A2781
2NZ4:Q47:R48
3G9C:Q47:R48
3U5H:51953:51948
3U5D:11949:11944
Closest classifer groups: show all      show selected
Group Members RMSD
base-phosphate/W_6BPh 1853 0.193
bp/HH_tran 1287 0.218
base-phosphate/W_3BPh 2382 0.242
bp/HS_cis 39 0.431
bp/SH_cis 39 0.431
bp/HW_cis 6 0.518
bp/WH_cis 6 0.518
bp/SH_tran 255 0.755
bp/HS_tran 255 0.755
bp/HW_tran 684 0.871

Extra

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Reference image (generated by PyMOL):
pymol image
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All members (generated by PyMOL):
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