ClaRNA

Doublet Group info: classifier/bp/SS_cis/GA

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: bp
Desc: SS_cis/GA
Sub-clusters:
count: 15     show
SS_cis/GA/sub-001
SS_cis/GA/sub-002
SS_cis/GA/sub-003
SS_cis/GA/sub-004
SS_cis/GA/sub-005
SS_cis/GA/sub-006
SS_cis/GA/sub-007
SS_cis/GA/sub-008
SS_cis/GA/sub-009
SS_cis/GA/sub-010
SS_cis/GA/sub-011
SS_cis/GA/sub-012
SS_cis/GA/sub-013
SS_cis/GA/sub-014
SS_cis/GA/sub-015
Members:
count: 1499
download members
1YJ9:0209:0153
3CCE:0209:0153
3G71:0209:0153
2OTL:0209:0153
1YIJ:0209:0153
1VQ6:0209:0153
1YJN:0209:0153
1YIT:0209:0153
3CCQ:0209:0153
1VQ4:0209:0153
3CC2:0209:0153
1VQK:0209:0153
1JJ2:0209:0153
1FFK:0208:0152
3CME:0857:0854
3U5F:61623:61759
3CCU:0857:0854
1VQK:0857:0854
1VQM:0857:0854
1VQ8:0857:0854
1VQP:02018:02331
3CCS:02018:02331
1VQK:02018:02331
3OHZ:A1586:A1224
3OGY:A101:A343
1VQ7:0857:0854
3CCS:0857:0854
3OHD:A101:A343
3OGE:A101:A343
1Q82:A2018:A2331
1Q81:A2018:A2331
2OTJ:02018:02331
3CC7:02483:01797
2OTJ:02483:01797
1VQM:02483:01797
3CME:02483:01797
3I56:02483:01797
3U5H:52126:52123
1YJW:02415:02615
3R8S:A2809:A2876
3CCV:02483:01797
1KD1:A2483:A1797
2J03:A2156:A2204
1M90:A2483:A1797
1VQ7:02483:01797
1YIT:02415:02615
1YHQ:02483:01797
1VQ6:01959:01956
1VQM:02332:01017
1N8R:A2483:A1797
2J01:A2156:A2204
1VQ6:02483:01797
1VQK:0172:0174
1VQL:02415:02615
3CPW:02483:01797
2ZJR:X2394:X1676
1FFK:01912:01909
1VQ5:02415:02615
3CCL:02483:01797
3F1F:A2507:A2749
1VQM:02415:02615
1VQP:02415:02615
1YHQ:0172:0174
1VQM:0172:0174
3CCJ:01959:01956
2OTJ:01959:01956
1Q81:A1959:A1956
1YI2:01959:01956
3G6E:0172:0174
1YIT:01959:01956
1YJW:0172:0174
3R8S:A258:A620
1Q82:A2483:A1797
3OHC:A1382:A1490
3CC2:02415:02615
3CCM:02415:02615
3CMA:02415:02615
3CC2:02332:01017
3OH7:A175:A232
1Q82:A172:A174
3OH7:A816:A1203
3CMA:02332:01017
3CCS:02332:01017
1Q81:A172:A174
1Q82:A2332:A1017
3KNI:A2512:A1707
3OH5:A816:A1203
1K9M:A2415:A2615
3CPW:0172:0174
2OTL:0172:0174
1JJ2:02415:02615
1N8R:A172:A174
1VQ9:0172:0174
3OH5:A2353:A2595
1VQN:0172:0174
3CCL:0172:0174
3CCE:02483:01797
3G6E:01959:01956
1JJ2:02332:01017
3OHJ:A816:A1203
3V7E:D42:D11
1S72:0172:0174
2QEX:02483:01797
2OTJ:02415:02615
2QA4:02482:01796
1YJW:02332:01017
1S72:02332:01017
1K8A:A2332:A1017
3U5H:52401:52449
3OI0:A1382:A1490
3G71:0172:0174
3OHK:A175:A232
2QA4:02331:01016
1VQ6:0172:0174
1N8R:A2332:A1017
1Q86:A2332:A1017
1K9M:A2332:A1017
1VQ7:02332:01017
1YJ9:0172:0174
3CME:0172:0174
1YJN:02332:01017
3U5D:155:157
3R8S:A1790:A1796
3OI1:A2437:A1708
3OI1:A2109:A2157
3CXC:02332:01017
2J01:A175:A232
1QVG:02332:01017
2J03:A175:A232
3R8T:A213:A215
2ZJR:X2310:X2552
3R8O:A540:A508
3U5F:6620:6934
2ZJR:X170:X227
2UUB:A61:A161
2VQE:A61:A161
2VQF:A61:A161
1N32:A61:A161
3U5B:21298:21383
3KNH:A61:A152
3SKL:A22:A19
3F1E:A1217:A1214
1XMQ:A1212:A1209
2UUB:A1217:A1214
3OGY:A1217:A1214
3R8O:A1239:A1236
3SKZ:B23:B20
3SKZ:A23:A20
2VQE:A1217:A1214
3OWW:A79:A32
3KNI:A1573:A707
3OWI:B79:B32
3OWW:B78:B31
3OHJ:A445:A243
3OHK:A445:A243
3OXM:A79:A32
2ZJR:X163:X1280
3OH5:A2346:A1077
2ZJR:X2242:X1896
3CCJ:0145:01429
3F1F:A171:A1384
3KNK:A168:A1319
1QVG:0915:02235
3SD1:A18:A21
1KD1:A915:A2235
3FO4:A20:A16
1VQ6:0915:02235
2J03:A2332:A1947
3LA5:A24:A20
1VQ5:0915:02235
3CD6:0915:02235
2EET:A22:A18
1Q81:A915:A2235
3CCR:0145:01429
1M90:A915:A2235
3DS7:A22:A18
3CC2:0915:02235
3OHK:A2285:A1947
3OH7:A445:A243
1S72:0915:02235
1JJ2:0915:02235
3G6E:0915:02235
3SUX:X21:X24
1YJ9:0915:02235
1VQ7:0915:02235
3OHJ:A72:A358
1YJN:0915:02235
3CCE:0915:02235
1VQ8:0915:02235
1KD1:A145:A1429
3CPW:0915:02235
1XJR:A10:A32
1VQ4:0915:02235
3F1H:A2439:A2025
1VQK:0915:02235
2QEX:0145:01429
3KNI:A445:A243
1Q86:A145:A1429
1VQ9:0145:01429
3I56:0145:01429
3CXC:0145:01429
3OI1:A1574:A707
3OH5:A1953:A981
1VQ4:0145:01429
1Q81:A2294:A680
2OTL:0145:01429
3U5B:21495:21497
1QVG:0145:01429
3CME:02294:0680
1JJ2:0145:01429
2UUB:A1497:A744
3CCU:0145:01429
3OHC:A1497:A744
1VQK:0145:01429
3CC7:0145:01429
1VQO:0145:01429
3G6E:0145:01429
1VQL:0145:01429
1Q81:A1667:A777
1YHQ:0145:01429
3G71:01667:0777
3OI1:A560:A1168
1VQM:0145:01429
2J00:A1497:A744
3CD6:01667:0777
3OHJ:A1574:A707
3KNI:A168:A1320
3OHK:A2245:A642
1YJ9:01667:0777
3CMA:01667:0777
1QVG:02294:0680
2VQF:A1497:A744
3CMA:02294:0680
1YJ9:02294:0680
3CCL:02294:0680
3CCJ:02294:0680
2OTJ:02294:0680
1VQN:01667:0777
3CCS:02294:0680
1VQK:01667:0777
1VQ5:02294:0680
3I56:01667:0777
1VQM:01667:0777
1KD1:A2294:A680
1VQ4:02294:0680
3CPW:02294:0680
1Q82:A2294:A680
1YIT:02294:0680
1YI2:02294:0680
3CCR:02294:0680
3OH5:A2245:A642
1YIT:01667:0777
2ZJR:X2202:X563
3PDR:A30:A33
1YJW:02294:0680
3CCM:02294:0680
3OH7:A1574:A707
3I56:02294:0680
3OH5:A1574:A707
3KNK:A2360:A1946
2J03:A560:A1168
1VQL:02294:0680
1NJI:A2294:A680
1VQ7:02294:0680
1YIJ:02294:0680
3CCQ:01411:01445
1VQ9:02294:0680
1S72:02294:0680
1FFK:02247:0679
2QEX:01411:01445
3CCE:01667:0777
1YJN:01667:0777
3R8T:A2407:A630
3G6E:01667:0777
3OHZ:A2245:A642
1YIJ:01667:0777
1VQP:02468:01953
1M90:A1411:A1445
1VQ6:01667:0777
3CCU:01411:01445
1YIT:01411:01445
1JJ2:01667:0777
1Q86:A1411:A1445
3F1H:A1467:A1563
3G6E:02468:01953
1M90:A1667:A777
3F1G:A1497:A744
1VQN:02468:01953
3CC2:02468:01953
1K9M:A1411:A1445
1VQ7:02468:01953
3CCE:01411:01445
3G6E:01411:01445
1NJI:A1411:A1445
1VQ8:02468:01953
1S72:01411:01445
3CCE:02468:01953
3KNK:A2497:A1881
3CPW:01411:01445
1VQL:01411:01445
1Q93:C14:A13
1YI2:02468:01953
1FJG:A764:A674
2ZJR:X634:X1551
3G9C:S44:S122
3OI1:A2422:A1882
3GS5:A22:C9
2GOZ:A16:A38
1XMQ:A90:A140
3R8N:A784:A694
3OGY:A90:A140
3CME:0178:0192
2VQE:A911:A1352
3OH5:A201:A214
3F1E:A90:A140
1GID:A7:A80
3B91:B9:B22
3U5D:11488:11974
1FJG:A911:A1352
2UUB:A90:A140
2J00:A90:A140
3OH5:A24:A1162
3OI0:A90:A140
3OHY:A90:A140
2UUA:A911:A1352
3CQS:B9:B22
2J01:A708:A1573
3U5D:11101:11113
2FGP:B9:C9
3CMA:0178:0192
3OHZ:A201:A214
3OI1:A201:A214
3KNI:A994:A1007
1VQ4:0178:0192
3OHK:A24:A1162
3G78:A126:A190
3F1F:A24:A1232
3OI1:A2316:A1029
2P7F:B9:C9
3CCR:0178:0192
3F1H:A24:A1232
3OHJ:A24:A1162
1QVG:0178:0192
3F1F:A2470:A1047
3CXC:0178:0192
3CCM:0178:0192
3OHK:A2316:A1029
1YJ9:0178:0192
1Q86:A178:A192
3B5A:B9:B22
1FFK:0177:0191
1VQ7:0197:0653
3G6E:0178:0192
3G71:0178:0192
2QA4:0197:0652
3KNI:A2391:A1035
1VQ6:0178:0192
3CCJ:0197:0653
2J03:A24:A1162
3CR1:B9:B22
2QEX:0197:0653
3F1F:A204:A217
3F1H:A1006:A1019
2QEX:0178:0192
2OUE:B9:C9
2J03:A988:A1001
1VQ8:0178:0192
1KD1:A178:A192
2J01:A24:A1162
3F1H:A204:A217
1K8A:A178:A192
1Q82:A178:A192
1VQ5:0197:0653
3OI1:A988:A1001
1VQN:0178:0192
1YIT:0178:0192
1YI2:0178:0192
1K9M:A178:A192
2OTL:0178:0192
1Q81:A197:A653
1K8A:A197:A653
1VQO:0178:0192
1YIT:0197:0653
1KD1:A197:A653
3CCL:0197:0653
3CC7:0197:0653
3CCQ:0197:0653
3R8N:A100:A149
3CME:01427:01823
1N8R:A197:A653
3CCE:0197:0653
1YJN:0197:0653
1VQK:0197:0653
3G71:01427:01823
3CC7:01427:01823
1VQP:0197:0653
1VQN:0197:0653
1VQ9:0197:0653
3CCV:01427:01823
3CXC:01427:01823
1YIT:01427:01823
1Q86:A1427:A1823
3CCE:01427:01823
1VQM:0197:0653
3CCS:01427:01823
1VQK:01427:01823
1YJW:01427:01823
1M90:A1427:A1823
1FFK:01380:01776
1YHQ:01427:01823
2OTL:01427:01823
3CC2:01427:01823
1VQ8:01427:01823
3CPW:01427:01823
1VQP:01427:01823
1YJN:02018:02331
1M90:A2018:A2331
3F1E:A101:A343
3CMA:0857:0854
3I56:02018:02331
3CCU:02018:02331
1VQ6:02018:02331
1FFK:01971:02284
3U5B:21544:21487
3U5H:5759:532
3F1E:A1382:A1490
1YIJ:02399:02638
1FJG:A101:A343
1VQ6:02399:02638
1FG0:A9:A322
2UUB:A1382:A1490
3CCJ:02361:01092
1YJN:02399:02638
1S72:02399:02638
3CC2:02399:02638
3CPW:02399:02638
2UUB:A101:A343
1JJ2:02399:02638
2UUB:A520:A488
2VQE:A101:A343
1KD1:A2399:A2638
1XMQ:A101:A343
3OH7:A1586:A1224
1VQ4:02399:02638
1NJI:A2399:A2638
3CCU:02399:02638
3R8T:A2808:A2875
3OI1:A195:A197
1QVG:02399:02638
1VQ5:02399:02638
3CC7:02399:02638
3OGE:A520:A488
2VQF:A101:A343
3KNK:A2184:A2232
1VQ9:02399:02638
3R8S:A681:A465
3CD6:02399:02638
2YDH:A42:A11
1VQM:02399:02638
3OHD:A520:A488
3R8S:A1121:A2509
1K9M:A2399:A2638
3OHC:A520:A488
2J03:A816:A1203
3R8T:A2599:A1776
3CC2:01959:01956
3IQP:A42:A11
1VQO:02399:02638
3CPW:01959:01956
2J01:A816:A1203
3CCE:02332:01017
3HHN:C24:C28
3F1G:A520:A488
1VQO:02483:01797
3U5F:61636:61775
1VQ5:01959:01956
1JJ2:01959:01956
1YHQ:01959:01956
3R8O:A1403:A1516
1VQN:02332:01017
1YJ9:02483:01797
1F27:A16:B1
1VQN:02483:01797
3I56:01959:01956
3G71:02483:01797
1VQM:01411:01445
3R8T:A964:A976
1KD1:A2468:A1953
1VQ8:01411:01445
1NJI:A2468:A1953
1Q82:A2468:A1953
1Q86:A2468:A1953
3CCM:02468:01953
1QVG:02468:01953
3U5F:61101:6616
3R8O:A937:A1373
3OH7:A2422:A1882
2QUW:B21:B41
3KNI:A2497:A1881
3R8S:A2585:A1959
Closest classifer groups: show all      show selected
Group Members RMSD
bp/SS_cis 1499 0.000
bp/HS_cis 244 0.478
bp/SH_cis 244 0.478
base-ribose/W_6BR 214 0.679
bp/WS_cis 464 0.832
bp/WS_tran 193 0.837
bp/SW_tran 193 0.837
base-ribose/H_9BR 531 0.850
bp/SW_cis 81 0.885
previously-uncategorized/unknown-0145 115 0.976

Extra

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Reference image (generated by PyMOL):
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All members (generated by PyMOL):
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