ClaRNA

Doublet Group info: classifier/stacking/></GU

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: stacking
Desc: ></GU
Sub-clusters:
count: 35     show
></GU/sub-001
></GU/sub-002
></GU/sub-003
></GU/sub-004
></GU/sub-005
></GU/sub-006
></GU/sub-007
></GU/sub-008
></GU/sub-009
></GU/sub-010
></GU/sub-011
></GU/sub-012
></GU/sub-013
></GU/sub-014
></GU/sub-015
></GU/sub-016
></GU/sub-017
></GU/sub-018
></GU/sub-019
></GU/sub-020
></GU/sub-021
></GU/sub-022
></GU/sub-023
></GU/sub-024
></GU/sub-025
></GU/sub-026
></GU/sub-027
></GU/sub-028
></GU/sub-029
></GU/sub-030
></GU/sub-031
></GU/sub-032
></GU/sub-033
></GU/sub-034
></GU/sub-035
Members:
count: 987
download members
3OHJ:A2413:A2414
3OHK:A2413:A2414
2J01:A2458:A2457
2J03:A622:A623
3U5H:52021:52022
3F1F:A2565:A2564
3OHZ:A2411:A2410
3OHK:A2411:A2410
3OHZ:A622:A623
3OH5:A2411:A2410
3OI1:A622:A623
3KNK:A1659:A1658
3U5B:21742:21743
3OHK:A622:A623
2J03:A1660:A1659
3CCQ:02457:02456
1Q86:A2457:A2456
3I56:02457:02456
1VQ9:02457:02456
1Q82:A2457:A2456
1YI2:02457:02456
1VQN:02457:02456
3CCR:02457:02456
3OHJ:A1660:A1659
1M90:A2457:A2456
1YJW:02457:02456
1YJ9:0355:0271
1NJI:A2457:A2456
1VQO:02457:02456
3OHK:A2017:A2018
2OTL:0355:0271
3CC2:02457:02456
2QEX:02457:02456
1VQ6:02457:02456
1S72:02457:02456
3OH7:A1660:A1659
1VQ5:02457:02456
1VQK:02457:02456
1JJ2:02457:02456
1VQL:02457:02456
1Q81:A355:A271
1YIJ:02457:02456
3CC4:02457:02456
1YHQ:02457:02456
3CD6:0355:0271
1VQ7:0355:0271
1YJN:0355:0271
3KNI:A622:A623
3CXC:0355:0271
3CXC:02457:02456
2QEX:0355:0271
3CCJ:02457:02456
3CCE:0355:0271
3CPW:02457:02456
3CC4:0355:0271
3CCL:0355:0271
3U5H:52703:52702
1YJW:0355:0271
1VQ9:0355:0271
1VQP:0355:0271
3CC2:0355:0271
1QVG:0355:0271
1NJI:A355:A271
2QA4:0355:0271
1JJ2:0355:0271
1VQN:0355:0271
1N8R:A355:A271
1VQL:0355:0271
3CCV:0355:0271
1Q82:A355:A271
3G6E:0355:0271
2OTJ:0355:0271
1VQK:0355:0271
1VQ7:0135:0134
1VQO:0355:0271
1VQ8:0355:0271
3CCM:02457:02456
3CME:0355:0271
3CXC:0135:0134
2HOM:A21:A20
1VQK:0135:0134
1VQL:0135:0134
3CD6:0135:0134
2OTL:0135:0134
1VQN:0135:0134
1VQP:0135:0134
3CPW:0135:0134
3EPH:E42:E41
1VQ9:0135:0134
3CCR:0355:0271
3CCE:0135:0134
1YI2:0135:0134
2OIU:P21:P36
3CCS:0135:0134
3CCS:0355:0271
1NJI:A135:A134
3CCQ:0355:0271
1S72:0135:0134
1JJ2:0135:0134
3G71:0135:0134
3I56:0135:0134
2OTJ:0135:0134
1YJW:0135:0134
3CCR:0135:0134
1YJ9:0135:0134
1K9M:A135:A134
3CCJ:0355:0271
3CCQ:0135:0134
2QEX:0135:0134
3EPH:F42:F41
3CZW:X6:X5
406D:E8:E7
3KNI:A2625:A2593
3U5H:5266:5291
3U5D:12068:12061
2R22:B6:B5
3D0M:X7:X6
3R8T:A2216:A2189
3R8S:A219:A426
1M5V:E20:E59
1YJ9:0178:0422
3OHK:A201:A442
3KNI:A201:A442
1FG0:A94:A79
3I56:0178:0422
2J03:A201:A442
3CC7:0178:0422
2ZJR:X1900:X1899
2ZJR:X196:X361
3OHJ:A2054:A2037
2OUE:C6:D10
3OHK:A2054:A2037
3CC4:0178:0422
3B5F:B19:C10
1FFK:0177:0421
1M5V:B20:B59
1VQL:0178:0422
3CXC:0178:0422
1VQ4:0178:0422
2ZJR:X2011:X1988
3CMA:0178:0422
2P7E:C6:D10
1VQN:0178:0422
2QA4:0178:0422
1VQN:02103:02088
3CCV:0178:0422
1YHQ:0178:0422
1VQ9:0178:0422
3BBK:B19:C10
3CD6:0178:0422
1JJ2:0178:0422
3OH7:A2054:A2037
3BBM:B19:C10
2BCZ:C6:D10
1VQP:02103:02088
3CMA:02103:02088
2D2L:C6:D10
2D2K:C6:D10
2FGP:C6:D10
1S72:02103:02088
3CC4:02103:02088
1S72:0178:0422
1VQ7:0178:0422
1VQO:0178:0422
1NJI:A2103:A2088
3OH5:A2054:A2037
1Q81:A2103:A2088
1KD1:A2103:A2088
1YIT:02103:02088
1N8R:A2103:A2088
1VQL:02103:02088
1ZFX:C6:D10
1Q82:A2103:A2088
3I2S:B19:C10
1VQ8:02103:02088
1VQM:02103:02088
1VQ9:02103:02088
3CCJ:0178:0422
3R8S:A8:A2622
1Q86:A178:A422
1N8R:A178:A422
1M5O:B20:B59
3KNH:A564:A610
3G6E:02103:02088
3BBI:B19:C10
3CCU:02103:02088
3B58:B19:C10
2P7D:C6:D10
3U5D:12344:12265
1ZFV:C6:D10
1YHQ:02621:02628
3OH7:A2578:A2585
1VQN:02621:02628
3OGY:A730:A630
3CC4:02621:02628
3CCM:02621:02628
3OHK:A2578:A2585
3CCQ:02621:02628
3CCJ:02621:02628
3KNK:A2669:A2645
3OH5:A2578:A2585
1N8R:A2621:A2628
2VQF:A730:A630
3OHJ:A2578:A2585
3OI1:A2578:A2585
3OHC:A730:A630
3OHD:A730:A630
1FJG:A730:A630
3R8O:A750:A650
2J01:A2625:A2632
1XMQ:A730:A630
2J03:A1608:A1907
2J00:A730:A630
2J02:A730:A630
3OHY:A730:A630
1G1X:E36:D16
1F7Y:B50:B15
3KNI:B43:B33
2AWE:E4:E5
1J6S:B4:B5
1J8G:A4:A5
2AWE:A4:A5
1P79:A3:A4
1J6S:C4:C5
3OGE:A400:A419
1J8G:C4:C5
2OTL:01979:01699
3CCE:01979:01699
3OHC:A400:A419
3OHD:A400:A419
1VQ6:01979:01699
1YIT:01979:01699
1K9M:A1979:A1699
1YJ9:01979:01699
1YJW:01979:01699
2J00:A418:A417
3OHY:A400:A419
2J02:A418:A417
1FJG:A400:A419
3F1E:A418:A417
3F1G:A418:A417
1Q81:A1979:A1699
1N32:A400:A419
3OI1:B43:B33
2QA4:942:932
2UXC:A418:A417
3OHZ:B43:B33
3KNH:A391:A410
2UUB:A1061:A1062
3OHK:B43:B33
3OH7:A2277:A2330
2VQE:A1061:A1062
2VQF:A1061:A1062
1YJ9:942:932
3OHJ:B43:B33
3OH5:A2277:A2330
3OI0:A418:A417
2UUA:A400:A419
1YJN:942:932
3OHK:A2277:A2330
1XMQ:A544:A543
3R8N:A426:A425
3OH7:B43:B33
2UUA:A544:A543
3CCQ:01122:01123
1N32:A544:A543
2VQF:A544:A543
2VQE:A400:A419
3OGE:A418:A417
1FJG:A544:A543
2J02:A544:A543
3OGY:A418:A417
3U5B:2612:2611
3R8O:A408:A427
3R8S:A1052:A1053
3U5F:6609:6608
1QA6:D8:D9
3R8O:A564:A563
1J8G:D4:D5
3CCS:01122:01123
3F1H:A82:A83
3F1F:A82:A83
3R8O:A1082:A1083
3CCM:01122:01123
3R8S:A2202:A2203
2J01:A2324:A2377
2J03:A2324:A2377
3KNI:A279:A436
1Y39:D8:D9
3CCL:01122:01123
1VQ7:02323:02376
1S72:02323:02376
3CC4:01122:01123
3CC2:02323:02376
1YI2:02323:02376
1YJW:02323:02376
3CCV:01122:01123
3CCR:01122:01123
2QEX:02323:02376
3D2X:A16:A18
1NJI:A2323:A2376
1K9M:A2323:A2376
3CPW:01122:01123
1VQP:02323:02376
3CCV:02323:02376
1VQ5:02323:02376
1K9M:A1122:A1123
1JJ2:01122:01123
3OXD:A16:A18
1YJN:02323:02376
1NJI:A1122:A1123
3G71:01122:01123
1HC8:D8:D9
2OTL:02323:02376
1K8A:A1122:A1123
1VQO:02323:02376
1N8R:A1122:A1123
1YHQ:01122:01123
3CME:02323:02376
1VQK:01122:01123
1Q86:A2323:A2376
1KD1:A1122:A1123
3OWW:A16:A18
1XMQ:A1025:A1170
1VQL:02323:02376
1VQM:01122:01123
1VQ9:02323:02376
1VQL:01122:01123
1VQN:01122:01123
1S72:01122:01123
1VQP:01122:01123
1QVG:01122:01123
1YI2:01122:01123
3CPW:02323:02376
1VQ4:01122:01123
2QEX:01122:01123
3CCE:01122:01123
1VQ7:01122:01123
2UXC:A1030:A1175
1VQM:02323:02376
3D2X:B16:B18
1VQ5:01122:01123
1M90:A2323:A2376
3CCM:02323:02376
3CCJ:02323:02376
3CC2:01122:01123
2OTJ:01122:01123
1YJW:01122:01123
1YJ9:01122:01123
1VQ6:02323:02376
3CCR:02323:02376
1DDY:G9:G14
3R8S:A2440:A2493
1FFK:02276:02329
1FJG:A1030:A1175
3OHJ:A279:A436
1Q81:A2323:A2376
3OHK:A279:A436
3KNK:A279:A436
2UUB:A1030:A1175
3CD6:02323:02376
3R8S:A59:A61
1DDY:A9:A14
1ET4:B9:B14
1YIT:02323:02376
3R8O:A1051:A1197
3R8T:A387:A389
3OH5:A279:A436
3OH7:A279:A436
1ET4:E9:E14
2J00:A1030:A1175
2J03:A279:A436
2XD0:V8:V11
3F1F:A282:A443
2UUA:A1030:A1175
3F1H:A282:A443
3R8N:A92:A68
3G6E:921:954
1DDY:E9:E14
1M90:B21:B54
3OI0:A1030:A1175
3OHY:A1030:A1175
2J03:A53:A56
2J01:A53:A56
1QVG:921:954
3U5H:52569:52622
3F1G:A1030:A1175
3CCV:921:954
3OGY:A1030:A1175
1N8R:B21:B54
1K9M:B21:B54
3CXC:921:954
1Q82:B21:B54
1VQ6:921:954
1S72:921:954
3CC4:921:954
1VQ5:921:954
1KD1:B21:B54
1K8A:B21:B54
3CC2:921:954
1YI2:921:954
3CCU:921:954
1VQO:921:954
3F1H:A53:A56
1VQ8:921:954
3F1F:A53:A56
3OHZ:A53:A56
1VQN:921:954
1YJN:921:954
3I56:921:954
3CMA:921:954
3OH7:A53:A56
3OH5:A53:A56
3CME:921:954
3CD6:921:954
1VQL:921:954
3CC7:921:954
3OHJ:A53:A56
1YJ9:921:954
3I56:0592:0536
2QEX:0592:0536
3CXC:0592:0536
3CCR:0592:0536
1Q82:A592:A536
1M90:A592:A536
1K8A:A592:A536
1YIJ:0592:0536
1KD1:A592:A536
3CPW:0592:0536
1YI2:0592:0536
1Q81:A592:A536
1K9M:A592:A536
3CCU:0592:0536
1VQ6:0592:0536
3CC4:0592:0536
1VQ9:0592:0536
1JJ2:0592:0536
1YJW:0592:0536
1YJ9:0592:0536
1VQ5:0592:0536
1S72:0592:0536
1VQN:0592:0536
1VQK:0592:0536
1VQ4:0592:0536
1VQP:0592:0536
1M5K:E20:E59
3B5S:B19:C10
2BCY:C6:D10
1YJ9:02103:02088
1M5K:B20:B59
3OI1:A2054:A2037
1YIJ:02103:02088
3R8S:A2217:A2190
1YJW:02103:02088
3OHD:A573:A619
3OHC:A573:A619
2ZJR:X2535:X2542
3CCE:02103:02088
3CCM:01703:01978
1FFK:01656:01931
3OI0:A573:A619
3F1F:A2208:A2191
3F1H:A2208:A2191
3OHY:A573:A619
3F1H:A2732:A2739
3F1F:A2732:A2739
3R8T:A1660:A1983
2J02:A573:A619
2QBZ:X30:X115
3KNK:A2653:A2660
3R8T:A2739:A2746
2UUA:A573:A619
2VQE:A573:A619
2VQF:A573:A619
1XMQ:A573:A619
3F1H:A1686:A1985
3U5H:52865:52872
1VQ6:02621:02628
3OH7:A1608:A1907
2UUB:A573:A619
3CCR:02621:02628
3F1F:A1686:A1985
1FJG:A573:A619
3OI1:A1608:A1907
3CMA:02621:02628
1YJN:02621:02628
1Q86:A2621:A2628
3CXC:02621:02628
3OHZ:A1608:A1907
3CD6:02621:02628
1VQM:02621:02628
1QVG:02621:02628
1M90:A2621:A2628
1YJ9:02621:02628
1NJI:A2621:A2628
1VQP:02621:02628
3CCS:02621:02628
3CCE:02621:02628
1YIJ:02621:02628
1VQ8:02621:02628
Closest classifer groups: show all      show selected
Group Members RMSD
stacking/>< 987 0.000
base-ribose/W_4BR 36 0.305
base-ribose/W_5BR 214 0.404
stacking/<< 11557 0.667
stacking/>> 11557 0.667
base-phosphate/SW_2BPh 167 1.156
base-phosphate/H_0BPh 39 1.170
previously-uncategorized/neighbours-0024 212 1.459
base-ribose/H_0BR 590 1.517
base-ribose/W_3BR 156 1.553

Extra

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Reference image (generated by PyMOL):
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All members (generated by PyMOL):
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