sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1G2E-B6-B7
X
>1FXL-B5-B6
X
>1B7F-Q8-Q9
X
>3U5F-6257-6258
X
>2QA4-0817-0818
X
>1K8A-A818-A819
X
>1YJN-0818-0819
X
>1VQ5-0818-0819
X
>1NJI-A818-A819
X
>1YJ9-0818-0819
X
>1YI2-0818-0819
X
>1M90-A818-A819
X
</seq>
<hsp>
0 1:0.137167317524
0 2:0.520760204738
0 3:0.648679865582
0 4:0.977512271226
0 5:0.776301262654
0 6:0.821267284848
0 7:0.811108265061
0 8:0.728469332897
0 9:0.840380190429
0 10:0.793279383629
0 11:0.75575559604
1 2:0.508413544055
1 3:0.664935609916
1 4:0.964925957886
1 5:0.777000841409
1 6:0.831725593981
1 7:0.796310275514
1 8:0.731537578049
1 9:0.828889551755
1 10:0.774510579445
1 11:0.741511388918
2 3:0.868206248162
2 4:0.999990390365
2 5:0.713595130133
2 6:0.747947382713
2 7:0.764810618072
2 8:0.646590588479
2 9:0.801211471687
2 10:0.760845758009
2 11:0.717544329453
3 4:0.756985688465
3 5:0.715271872394
3 6:0.613402693194
3 7:0.676649006596
3 8:0.600983483264
3 9:0.661603287036
3 10:0.598608535708
3 11:0.575769643646
4 5:0.573445123837
4 6:0.454257383086
4 7:0.402683218237
4 8:0.566099424259
4 9:0.371551841341
4 10:0.448023438774
4 11:0.459009496772
5 6:0.26406952107
5 7:0.2474287274
5 8:0.17951126431
5 9:0.231051960116
5 10:0.260284157274
5 11:0.252095743636
6 7:0.260348829425
6 8:0.185148865819
6 9:0.196267129269
6 10:0.249066449967
6 11:0.21623574386
7 8:0.241255786581
7 9:0.133325594181
7 10:0.13094661402
7 11:0.196007613987
8 9:0.240832042584
8 10:0.206683754463
8 11:0.184326566595
9 10:0.156264607026
9 11:0.177414514627
10 11:0.114819529765
</hsp>