ClaRNA

Doublet Group info: classifier/previously-uncategorized/neighbours-0005/Pu-Py

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: previously-uncategorized
Desc: neighbours-0005/Pu-Py
Members:
count: 595
download members
2C51:S6:S7
3U5B:2986:2987
3U5F:61628:61629
2YDH:A33:A34
3SD1:A20:A21
3KNH:A1207:A1208
3OH5:A1290:A1291
3OH7:A1290:A1291
3G78:A11:A12
3R8O:A278:A279
3OHZ:A1290:A1291
3CCR:02689:02690
3KNK:A43:A44
3KNH:A1332:A1333
2QA4:01405:01406
2VQF:A771:A772
1K8A:A1406:A1407
2J01:A1159:A1160
1ZBH:E9:E10
1KD1:A1406:A1407
1K9M:A1406:A1407
3OHJ:A1290:A1291
3LWO:D29:D30
1VQ9:01406:01407
3CQS:C8:C9
1YJ9:01406:01407
3R8S:A614:A615
3U5D:11335:11336
1QVG:02138:02139
2CKY:B40:B41
1S72:01406:01407
3ADD:C41:C42
1Q86:A1406:A1407
1VQO:01406:01407
2J02:A450:A451
2J00:A450:A451
1VQL:01406:01407
3RKF:C21:C22
2UXC:A1341:A1342
3R8S:A1204:A1205
3CCS:01406:01407
1FFK:01359:01360
1VQ8:01406:01407
1VQP:01406:01407
3CC4:01406:01407
3U5D:1197:1198
1VQ7:02689:02690
3CCJ:02138:02139
1NJI:A1406:A1407
3G71:01406:01407
2QA4:021:022
3CC7:01406:01407
3CME:01406:01407
3CC2:01406:01407
3CCE:01406:01407
3CCV:02689:02690
1VQ4:01406:01407
1YJ9:02689:02690
1YJ9:021:022
3SIU:F8:F9
1Q82:A1406:A1407
3LWQ:D29:D30
2QA4:02137:02138
1N8R:A1406:A1407
1VQN:01406:01407
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1YIT:01406:01407
1QVG:01406:01407
1VQ6:01406:01407
3G6E:01406:01407
1VQ5:01406:01407
1E7K:C5:C6
1VQ7:01406:01407
2QA4:036:037
3CME:036:037
3CCL:01406:01407
2J03:A1647:A1648
3CME:021:022
3CC2:02689:02690
2J01:A1647:A1648
3ADB:C45:C46
3KNK:A1164:A1165
1YI2:01406:01407
2QEX:01406:01407
1YJN:01406:01407
2OTL:02689:02690
3I56:01406:01407
3CC4:02689:02690
3CD6:01834:01835
3CCU:01406:01407
3CPW:01406:01407
3CCQ:02689:02690
2OTJ:01406:01407
3GX5:A33:A34
1YHQ:01406:01407
3U5B:2350:2351
3U5D:1144:1145
3RKF:B21:B22
1XMQ:A1335:A1336
1YHQ:02689:02690
2OZB:F11:F12
2UUA:A1341:A1342
1VQ5:02676:02677
2J03:A43:A44
3CCU:02689:02690
3CCR:01834:01835
2J01:A43:A44
3R8T:A1751:A1752
3LWP:D29:D30
3CCR:01406:01407
1YJ9:036:037
1YIT:02689:02690
3SKZ:B22:B23
2P7F:D8:D9
3I56:021:022
3CCJ:021:022
1FFK:021:022
2VQE:A1341:A1342
1YI2:02676:02677
3CCE:02689:02690
2HVY:E31:E32
1QVG:036:037
3SIU:C8:C9
1Q86:A2676:A2677
3V7E:D33:D34
1YI2:0306:0307
1M90:A2676:A2677
1YJW:01406:01407
1YIT:036:037
3G6E:02689:02690
3HJW:D29:D30
3BBK:C8:C9
3CCS:01834:01835
1N32:A1341:A1342
1E7K:D5:D6
3CCQ:01406:01407
3U5H:5144:5145
3CMA:02676:02677
3F1G:A270:A271
2OZB:C11:C12
3CMA:02689:02690
1SDS:F9:F10
3F1E:A270:A271
1YJW:021:022
3F1E:A771:A772
1VQ7:02676:02677
3CCS:021:022
1YJN:01834:01835
3CPW:02689:02690
3V7E:C33:C34
3CCS:036:037
2QA4:058:059
3CCJ:01834:01835
3R8N:A278:A279
3CCJ:058:059
3CMA:036:037
2H0Z:B69:B70
3I56:02689:02690
3CCJ:0251:0252
3D2G:B40:B41
1VQ6:01834:01835
3G6E:01834:01835
1K9M:A251:A252
1Q81:A1834:A1835
3CCQ:021:022
3CUL:C52:C53
3CME:01834:01835
3CC7:02689:02690
1YJW:0306:0307
3CCS:0251:0252
2PN4:C9:C10
2HO7:B44:B45
1K8A:A251:A252
1YIT:0306:0307
3R8S:A1751:A1752
2HO6:B69:B70
1VQP:02689:02690
1VQ6:036:037
1S72:01834:01835
1YIT:0251:0252
3CUN:C52:C53
1VQ8:0251:0252
1N8R:A251:A252
2QEX:0251:0252
3NMU:E26:E27
3SLM:A22:A23
1M90:A1834:A1835
2QA4:02688:02689
1Q82:A36:A37
3F1H:A43:A44
3B4B:B69:B70
1KD1:A1834:A1835
2H0W:B69:B70
3CCL:0251:0252
2OTL:0251:0252
3R8T:A49:A50
3CPW:036:037
1VQN:01834:01835
3Q3Z:V12:V13
3I56:01834:01835
3Q51:A20:A21
1Q81:A251:A252
3I56:058:059
3CPW:0251:0252
1FFK:01787:01788
1YJN:036:037
1FFK:0305:0306
1VQK:0306:0307
1VQ7:01834:01835
1VQP:0306:0307
3G71:036:037
3F1H:A1229:A1230
1VQ6:0251:0252
3F1F:A1229:A1230
1VQ6:0306:0307
3CCM:0306:0307
3CCV:0306:0307
1K8A:A306:A307
1K9M:A306:A307
3U5H:5340:5341
3CCQ:0306:0307
1YJW:01834:01835
3CCE:0442:0443
3I56:0251:0252
1QVG:0306:0307
1M5O:B57:B58
3CCL:0442:0443
3U5B:21616:21617
3OHD:A270:A271
3CC2:0306:0307
3CCU:0306:0307
3OHC:A270:A271
3CPW:0306:0307
1Q81:A36:A37
3CME:0306:0307
2EES:A21:A22
3KNK:A1744:A1745
3OH5:A1745:A1746
3G71:0442:0443
3CME:0442:0443
3OH7:A1745:A1746
3U5D:11986:11987
3CD6:0442:0443
3R8S:A1813:A1814
3CD6:0306:0307
3CC4:0306:0307
3CCJ:01575:01576
2QEX:0442:0443
2UUB:A270:A271
3CC7:0442:0443
3CC7:0306:0307
1Y27:X22:X23
3CCV:0442:0443
3KNH:A261:A262
1YJW:0442:0443
2EEW:A21:A22
3G6E:0442:0443
1ZBH:F9:F10
1YJ9:0442:0443
2G9C:A21:A22
1VQP:0442:0443
1YHQ:0306:0307
3R8T:A2825:A2826
1VQK:0442:0443
3CCU:0442:0443
1VQL:0442:0443
2OTJ:0306:0307
3CC4:0442:0443
3CCQ:0442:0443
1VQO:0442:0443
3GOG:A20:A21
1VQ4:0306:0307
1VQ5:0442:0443
1VQM:0442:0443
3GER:A21:A22
3U5H:51990:51991
3OH5:A43:A44
3CCM:0442:0443
3OH7:A43:A44
3G71:0306:0307
1Y26:X23:X24
2UXC:A270:A271
2OTJ:0442:0443
2EET:A21:A22
3DS7:B21:B22
1YHQ:0442:0443
3FO4:A19:A20
3GX2:A33:A34
2XNZ:A20:A21
1NJI:A442:A443
3CCJ:0442:0443
3CXC:0306:0307
1YI2:0442:0443
3F1H:A1725:A1726
1VQ4:0442:0443
3OI1:A462:A463
1VQ6:0442:0443
1VQ7:0442:0443
3OHZ:A462:A463
3DS7:A21:A22
3F1F:A1725:A1726
1YIT:0442:0443
3CCS:0442:0443
3CC2:0442:0443
2J00:A270:A271
1YIJ:0442:0443
1VQ9:0442:0443
3OGE:A270:A271
2EEV:A21:A22
3OHJ:A462:A463
1VQN:0442:0443
3OHK:A462:A463
3OI0:A270:A271
3OGY:A270:A271
3I56:0442:0443
3CCE:0306:0307
3OHY:A270:A271
1Q86:A442:A443
3CPW:0442:0443
3RW6:H45:H46
1KD1:A442:A443
2HO6:B44:B45
1S72:0442:0443
3OH7:A462:A463
3OHZ:A1745:A1746
1QVG:0442:0443
3FO6:A21:A22
2EEU:A21:A22
3B4C:B44:B45
1JJ2:0442:0443
3CCS:0306:0307
2OTL:0442:0443
1YJN:0442:0443
1Q82:A442:A443
1U8D:A21:A22
1Q81:A442:A443
3CCR:0306:0307
3R8T:A447:A448
3OHJ:A1745:A1746
3F1H:A1823:A1824
3U5H:53023:53024
1FJG:A270:A271
2J01:A1745:A1746
2J03:A1745:A1746
3F1F:A1823:A1824
1M90:A442:A443
2QA4:0306:0307
1K9M:A442:A443
1K8A:A442:A443
3OHK:A1745:A1746
1N8R:A442:A443
3GAO:A21:A22
3G4M:A21:A22
3F1F:A469:A470
2H0S:B44:B45
3KNI:A1744:A1745
3F1H:A469:A470
1FFK:0441:0442
2OTL:0306:0307
1N32:A270:A271
3I56:0306:0307
3LA5:A23:A24
3U5F:6354:6355
3B4A:B44:B45
3CCJ:0306:0307
3B4B:B44:B45
2H0Z:B44:B45
2GCS:B44:B45
2H0W:B44:B45
2GCV:B44:B45
3F1F:A43:A44
3CD6:036:037
1VQ9:01834:01835
2OTJ:036:037
3KNI:A65:A66
2GCV:B69:B70
2J01:A2135:A2136
3CMA:0251:0252
1VQ7:036:037
1YJ9:0251:0252
1S72:0251:0252
3OH5:A1159:A1160
1NJI:A36:A37
1VQM:01834:01835
1VQP:01834:01835
1RLG:D17:D18
1YJ9:0306:0307
1VQ7:0306:0307
1K8A:A36:A37
1NJI:A251:A252
3CCR:058:059
3CCU:01834:01835
1JJ2:0251:0252
1VQN:0306:0307
3CCR:0251:0252
2OTJ:0251:0252
1YIJ:036:037
1M90:A251:A252
1VQL:01834:01835
2QA4:0442:0443
3CCE:0251:0252
1YHQ:036:037
1NJI:A1834:A1835
3G71:0251:0252
3U5D:13022:13023
3CD6:0251:0252
3G9C:R58:R59
1JJ2:036:037
1FFK:0250:0251
1VQL:036:037
3CCS:02689:02690
1YHQ:0251:0252
1M90:A36:A37
3R8T:A1699:A1700
1VQ9:0251:0252
3CC4:01834:01835
2OTJ:01834:01835
3CMA:0306:0307
1VQP:036:037
3CCM:0251:0252
1K8A:A1834:A1835
3OH7:A1159:A1160
1S72:036:037
1YJN:0306:0307
3CCQ:036:037
1VQP:0251:0252
3CCL:01834:01835
1VQO:01834:01835
1VQO:0251:0252
3U5D:437:438
3CME:01575:01576
3CCM:036:037
1Q82:A1834:A1835
1N8R:A1834:A1835
1FFK:036:037
3GX6:A33:A34
3CC7:036:037
3G6E:036:037
1VQ9:036:037
3CPW:01834:01835
2J03:A2135:A2136
3CC2:0251:0252
2QEX:036:037
1VQN:036:037
1N8R:A306:A307
3GX7:A33:A34
2H0X:B69:B70
1N8R:A36:A37
1VQK:036:037
1S72:0306:0307
3R8S:A49:A50
1VQM:0251:0252
3CCR:036:037
1VQ5:036:037
3G6E:0251:0252
1VQN:0251:0252
1VQ8:036:037
1VQ8:0306:0307
1VQM:0306:0307
3CC2:036:037
3CCL:036:037
3Q50:A21:A22
3G6E:0306:0307
1YIJ:0251:0252
1VQL:0306:0307
2GCS:B69:B70
3CMA:0442:0443
1VQK:01834:01835
3CCU:0251:0252
3CC4:036:037
3CXC:0251:0252
1YJW:0251:0252
3CCV:0251:0252
3CCM:01834:01835
3OHJ:A1159:A1160
3CC7:0251:0252
1M90:A306:A307
3Q3Z:A12:A13
1KD1:A36:A37
3CCU:036:037
3OHZ:A1159:A1160
3CCJ:02689:02690
1VQO:036:037
1YJN:0251:0252
1VQ4:0251:0252
3CC4:0251:0252
3R8T:A1552:A1553
1VQ5:0306:0307
1VQ9:0306:0307
3CCQ:01834:01835
1YI2:0251:0252
1VQ5:0251:0252
1VQ7:0251:0252
3OI1:A1159:A1160
3CCE:036:037
1K9M:A36:A37
3CMA:01834:01835
1VQM:036:037
1VQO:0306:0307
1Q82:A306:A307
Closest classifer groups: show all      show selected
Group Members RMSD
base-phosphate/H_0BPh 189 0.419
previously-uncategorized/neighbours-0030 192 1.634
base-phosphate/H_8BPh 617 1.988
base-phosphate/W_6BPh 83 2.170
base-ribose/W_6BR 101 2.185
base-ribose/W_4BR 78 2.282
base-phosphate/W_5BPh 430 2.321
base-phosphate/H_7BPh 640 2.569
base-phosphate/H_9BPh 314 2.730
previously-uncategorized/unknown-0174 104 2.794

Extra

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Reference image (generated by PyMOL):
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All members (generated by PyMOL):
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