ClaRNA

Doublet Group info: classifier/previously-uncategorized/neighbours-0032/Pu-Py

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: previously-uncategorized
Desc: neighbours-0032/Pu-Py
Members:
count: 182
download members
3OGY:A999:A1000
3OGE:A999:A1000
3OHD:A999:A1000
3OHC:A999:A1000
3OHY:A999:A1000
3OI0:A999:A1000
3OHY:A1245:A1246
3OI0:A1245:A1246
2H0W:B94:B95
2ZJR:X2165:X2166
3OHD:A1245:A1246
3OHC:A1245:A1246
2HO7:B94:B95
3OGE:A1245:A1246
3OGY:A1245:A1246
3G8T:R111:R112
2NZ4:S111:S112
2GCV:B94:B95
2GCS:B94:B95
2HO6:B94:B95
2H0Z:B94:B95
2H0X:B94:B95
3L3C:P111:P112
3G9C:R111:R112
3U5B:21282:21283
2J02:A999:A1000
2J00:A999:A1000
2VQE:A978:A979
1Q93:A15:A16
2H0S:B94:B95
2J02:A1245:A1246
3U5F:61294:61295
2J00:A1245:A1246
3U5B:21070:21071
3G8T:P111:P112
3B4B:B94:B95
3U5D:1358:1359
3F1G:A1245:A1246
3F1E:A1245:A1246
3B4C:B93:B94
3KNH:A1236:A1237
3G9C:S111:S112
3U5F:61082:61083
3L3C:Q111:Q112
2NZ4:P111:P112
2UUA:A1245:A1246
3G78:A91:A92
3U5H:5358:5359
3B4A:B93:B94
2VQF:A978:A979
3L3C:S111:S112
2VQF:A1245:A1246
3OGE:A1203:A1204
2VQE:A1245:A1246
3OHC:A1203:A1204
3OGY:A1203:A1204
3OHD:A1203:A1204
2J02:A1203:A1204
1XMQ:A1240:A1241
2J00:A1203:A1204
2QA4:01589:01590
3OHY:A1203:A1204
3OI0:A1203:A1204
1FJG:A1245:A1246
3G9C:P111:P112
2VQE:A1203:A1204
3G9C:Q111:Q112
2UXC:A1245:A1246
1N32:A1245:A1246
1FJG:A1203:A1204
3IQN:A52:A53
3U5D:11379:11381
2NZ4:R111:R112
2NZ4:Q111:Q112
3U5H:52035:52036
3OHJ:A644:A645
3OHK:A644:A645
3F1H:A1540:A1541
3F1F:A1540:A1541
2UUB:A1245:A1246
3G8T:S111:S112
3OI1:A644:A645
2UXC:A978:A979
3OHZ:A644:A645
3U5D:12031:12032
3CXC:02566:02567
2J01:A644:A645
3OH7:A644:A645
3OH5:A644:A645
2J03:A644:A645
3KNH:Y57:Y58
2ZJR:X1880:X1881
2ZJR:X2643:X2644
1U9S:A128:A129
3CCJ:0231:0232
3KNI:A1930:A1931
3OH5:A1931:A1932
3OH7:A1931:A1932
3Q3Z:V55:V56
3OHZ:A1931:A1932
3R8S:A2853:A2854
3U5H:5406:5407
3OHK:A1931:A1932
3OHJ:A1931:A1932
3OI1:A1931:A1932
3OH7:A1471:A1472
3KNK:A1476:A1477
3R8S:A2008:A2009
2J03:A1471:A1472
3OH5:A1471:A1472
3R8S:A1847:A1848
2J01:A1471:A1472
3OI1:A1471:A1472
3OH7:A1486:A1487
3OHZ:A1471:A1472
3KNI:A1477:A1478
3OH5:A1486:A1487
3OI1:A1486:A1487
3OHK:A1471:A1472
3OHZ:A1486:A1487
3OHJ:A1471:A1472
3F1F:A1564:A1565
3OHK:A1486:A1487
3F1H:A1564:A1565
3OHJ:A1486:A1487
2QA4:0509:0510
3CME:0509:0510
3L3C:R111:R112
1YJ9:0509:0510
3CCR:0509:0510
1Q81:A509:A510
1VQ9:0509:0510
3CCJ:0509:0510
3CD6:0509:0510
3CCE:0509:0510
3CCQ:0509:0510
3CCS:0509:0510
1QVG:0509:0510
3CCV:0509:0510
3I56:0509:0510
3CC4:0509:0510
1Q86:A509:A510
3G71:0509:0510
1K8A:A509:A510
3CMA:0509:0510
1VQN:0509:0510
1YJN:0509:0510
3CCM:0509:0510
3CPW:0509:0510
1VQ4:0509:0510
1YIJ:0509:0510
1YIT:0509:0510
3CC7:0509:0510
1KD1:A509:A510
3G6E:0509:0510
2OTJ:0509:0510
1YI2:0509:0510
1VQK:0509:0510
3CCU:0509:0510
1VQ5:0509:0510
1K9M:A509:A510
1M90:A509:A510
1VQ7:0509:0510
1VQM:0509:0510
1VQP:0509:0510
1YHQ:0509:0510
3CCL:0509:0510
2OTL:0509:0510
3CXC:0509:0510
2QEX:0509:0510
1VQ6:0509:0510
1VQ8:0509:0510
1VQO:0509:0510
1VQL:0509:0510
1NJI:A509:A510
1Q82:A509:A510
1YJW:0509:0510
1N8R:A509:A510
1FFK:0508:0509
3CC2:0509:0510
1S72:0509:0510
1JJ2:0509:0510
Closest classifer groups: show all      show selected
Group Members RMSD
bp/HW_tran 11 0.250
bp/WH_tran 11 0.250
base-ribose/H_7BR 1398 0.625
special/SH_cis 1 0.704
special/HS_cis 1 0.704
previously-uncategorized/unknown-0028 354 0.730
bp/HW_cis 141 1.134
base-phosphate/H_7BPh 824 1.189
bp/HH_tran 119 1.194
base-phosphate/H_9BPh 715 1.373

Extra

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Reference image (generated by PyMOL):
pymol image
show in jmol
All members (generated by PyMOL):
pymol image
show in jmol