sequences=39
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1YJW-01650-01648
X
>3CCR-01650-01648
X
>3R8T-A1610-A1608
X
>3KNH-A689-A688
X
>3CMA-99-98
X
>3CCR-99-98
X
>3CCE-99-98
X
>1FFK-99-98
X
>3CCJ-99-98
X
>1NJI-B9-B8
X
>1Q81-B9-B8
X
>3CD6-99-98
X
>2OTJ-99-98
X
>1YIT-99-98
X
>1VQK-99-98
X
>3CCM-99-98
X
>3G6E-99-98
X
>1VQO-99-98
X
>3CC4-99-98
X
>1VQ5-99-98
X
>3G71-99-98
X
>1YIJ-99-98
X
>1JJ2-99-98
X
>3CCQ-99-98
X
>1VQ7-99-98
X
>1S72-99-98
X
>3I56-99-98
X
>1VQ8-99-98
X
>1VQ9-99-98
X
>1VQN-99-98
X
>3CPW-99-98
X
>3CCU-99-98
X
>1YJW-99-98
X
>1VQ6-99-98
X
>2QEX-99-98
X
>1YI2-99-98
X
>1VQP-99-98
X
>1VQL-99-98
X
>3CCL-99-98
X
</seq>
<hsp>
0 1:0.141552529178
0 2:0.267747287325
0 3:0.911906479047
0 4:0.614369867315
0 5:0.509852828053
0 6:0.470899643395
0 7:0.530277518482
0 8:0.506721672293
0 9:0.519821304349
0 10:0.624648894587
0 11:0.494359096522
0 12:0.526444470855
0 13:0.54180995914
0 14:0.515832831843
0 15:0.514085370486
0 16:0.488081677013
0 17:0.494643262635
0 18:0.485065363422
0 19:0.503815432553
0 20:0.504475347429
0 21:0.489588418684
0 22:0.50824287715
0 23:0.506633881646
0 24:0.491119925052
0 25:0.500390561121
0 26:0.511768813718
0 27:0.502981355878
0 28:0.551899861934
0 29:0.499780118962
0 30:0.540791065818
0 31:0.479008131951
0 32:0.495296886641
0 33:0.477985089593
0 34:0.515151545118
0 35:0.504421554779
0 36:0.473694975619
0 37:0.478724959201
0 38:0.417306397495
1 2:0.266471072579
1 3:0.99527562781
1 4:0.698497229957
1 5:0.601055002796
1 6:0.555856885286
1 7:0.593538180396
1 8:0.574346379436
1 9:0.587808279129
1 10:0.681961237038
1 11:0.570098255586
1 12:0.596993984343
1 13:0.624026460803
1 14:0.593866749994
1 15:0.588526661655
1 16:0.563944004919
1 17:0.568193039775
1 18:0.563701786901
1 19:0.56587942192
1 20:0.579119782454
1 21:0.561831885994
1 22:0.573834925958
1 23:0.583143360318
1 24:0.552068305479
1 25:0.565403222646
1 26:0.591143283585
1 27:0.577889878342
1 28:0.632000583118
1 29:0.576093159913
1 30:0.617359778853
1 31:0.562790830261
1 32:0.576396382052
1 33:0.544179085383
1 34:0.58012470434
1 35:0.582653204888
1 36:0.551103198997
1 37:0.556771844933
1 38:0.50042173888
2 3:0.999998876539
2 4:0.700260591499
2 5:0.597042876729
2 6:0.520185258439
2 7:0.573480818639
2 8:0.554851275351
2 9:0.584429136508
2 10:0.70346358105
2 11:0.511337655791
2 12:0.607195209974
2 13:0.589138970842
2 14:0.56753665121
2 15:0.593102532612
2 16:0.545871659776
2 17:0.550999593904
2 18:0.542471252551
2 19:0.566312654014
2 20:0.553063921104
2 21:0.531741338675
2 22:0.56874023645
2 23:0.575545689877
2 24:0.54844198727
2 25:0.560570777462
2 26:0.563129086596
2 27:0.55452523944
2 28:0.6196735761
2 29:0.556208399309
2 30:0.60429093367
2 31:0.553545579095
2 32:0.570096756827
2 33:0.51463092982
2 34:0.572969345534
2 35:0.565224570304
2 36:0.524841136644
2 37:0.546442782076
2 38:0.456014356249
3 4:0.414073019502
3 5:0.486387930175
3 6:0.540265324797
3 7:0.52379318333
3 8:0.61253380419
3 9:0.525075551017
3 10:0.477164556635
3 11:0.549262847522
3 12:0.501209488242
3 13:0.495256370658
3 14:0.512357027221
3 15:0.499050775248
3 16:0.517815806029
3 17:0.527705714691
3 18:0.528606377573
3 19:0.541392687633
3 20:0.519109396978
3 21:0.532454901575
3 22:0.525685634789
3 23:0.490599752823
3 24:0.558785609319
3 25:0.533704522318
3 26:0.496850449635
3 27:0.511594334416
3 28:0.469182831269
3 29:0.506858644077
3 30:0.473413149428
3 31:0.505260457038
3 32:0.531510195217
3 33:0.55260621557
3 34:0.540921806596
3 35:0.507970279341
3 36:0.53365914828
3 37:0.519239738207
3 38:0.592083071412
4 5:0.154616510642
4 6:0.243070639423
4 7:0.192164227255
4 8:0.245292784809
4 9:0.163045736111
4 10:0.213743561272
4 11:0.255674666357
4 12:0.135062245813
4 13:0.155397806335
4 14:0.152711526496
4 15:0.127528242577
4 16:0.181551659303
4 17:0.195464085261
4 18:0.172888298843
4 19:0.202225831784
4 20:0.186911782998
4 21:0.222425596177
4 22:0.188871260275
4 23:0.15035521956
4 24:0.229697116463
4 25:0.190736192592
4 26:0.177060611072
4 27:0.181203694839
4 28:0.12033621775
4 29:0.174554225265
4 30:0.138471399737
4 31:0.16291031582
4 32:0.17956310334
4 33:0.240115128973
4 34:0.204177680145
4 35:0.161689242929
4 36:0.197783708928
4 37:0.170546668662
4 38:0.260941857871
5 6:0.172558352857
5 7:0.197463611033
5 8:0.265209719343
5 9:0.157463710918
5 10:0.259249059031
5 11:0.226668071539
5 12:0.173561507463
5 13:0.151761301836
5 14:0.123547190548
5 15:0.135602866935
5 16:0.143255412987
5 17:0.116702368505
5 18:0.132124072739
5 19:0.208754582584
5 20:0.174409591511
5 21:0.197378452231
5 22:0.197542721641
5 23:0.138695188433
5 24:0.225906910144
5 25:0.1891842936
5 26:0.167689658074
5 27:0.140759011392
5 28:0.136583326017
5 29:0.150283215025
5 30:0.147227086323
5 31:0.0972217498023
5 32:0.189645989784
5 33:0.199463268249
5 34:0.201035933468
5 35:0.133679239777
5 36:0.146839664157
5 37:0.117117253674
5 38:0.173953316523
6 7:0.185142557769
6 8:0.289514091487
6 9:0.208605856384
6 10:0.344049435938
6 11:0.152589371854
6 12:0.211425570999
6 13:0.195395380495
6 14:0.14524893513
6 15:0.168332634904
6 16:0.124578683647
6 17:0.12811764314
6 18:0.13874706688
6 19:0.219918648505
6 20:0.171440140934
6 21:0.172919644968
6 22:0.200759138855
6 23:0.150544110985
6 24:0.236583362678
6 25:0.195295799798
6 26:0.156088154864
6 27:0.146845209969
6 28:0.213667204396
6 29:0.136486221609
6 30:0.195816965053
6 31:0.141521032498
6 32:0.232708748478
6 33:0.161072496949
6 34:0.245771169219
6 35:0.174011525387
6 36:0.117413461712
6 37:0.128970973491
6 38:0.119609467565
7 8:0.179420406775
7 9:0.0780460763255
7 10:0.192587777655
7 11:0.124784081497
7 12:0.0981926490139
7 13:0.113170230823
7 14:0.0882554455136
7 15:0.0980486149656
7 16:0.07526518379
7 17:0.118958686966
7 18:0.0857193420016
7 19:0.067298179472
7 20:0.0649078013197
7 21:0.0812091496834
7 22:0.0525280501482
7 23:0.0763936089304
7 24:0.0900872022873
7 25:0.0498443184335
7 26:0.0844586205117
7 27:0.0719419522776
7 28:0.116000652759
7 29:0.0685170099342
7 30:0.088320444105
7 31:0.117511812833
7 32:0.141205768044
7 33:0.0769967750748
7 34:0.0963939242279
7 35:0.0877911705344
7 36:0.0882511882189
7 37:0.0963695702995
7 38:0.159605565624
8 9:0.165076002499
8 10:0.254156241241
8 11:0.211234693453
8 12:0.158386104325
8 13:0.168307020419
8 14:0.184321645184
8 15:0.186726112748
8 16:0.198913378404
8 17:0.244336569788
8 18:0.173551227406
8 19:0.151885840072
8 20:0.161586397588
8 21:0.183480801698
8 22:0.156141249129
8 23:0.189594228009
8 24:0.145516717768
8 25:0.157118559777
8 26:0.183087061622
8 27:0.198236408542
8 28:0.177940094341
8 29:0.192235590802
8 30:0.184883199267
8 31:0.201314223303
8 32:0.108809619099
8 33:0.202583573483
8 34:0.140711624118
8 35:0.171273774103
8 36:0.194795170823
8 37:0.198927235263
8 38:0.220977878926
9 10:0.159171875223
9 11:0.17391949965
9 12:0.0753395074401
9 13:0.102600810784
9 14:0.0821540092666
9 15:0.0775544867576
9 16:0.0926203602663
9 17:0.112082003857
9 18:0.0826425139896
9 19:0.0717674209086
9 20:0.0878346075947
9 21:0.115178630291
9 22:0.0726790658631
9 23:0.0805004634516
9 24:0.0942115735785
9 25:0.0621646051047
9 26:0.108617943961
9 27:0.0822568993175
9 28:0.0828233390321
9 29:0.0907748586782
9 30:0.0717145590127
9 31:0.0958782749285
9 32:0.116628251281
9 33:0.117257363348
9 34:0.0694081988333
9 35:0.0666251484332
9 36:0.106091166015
9 37:0.0869279275869
9 38:0.167580286007
10 11:0.29119031884
10 12:0.171523222222
10 13:0.208211313704
10 14:0.222309690382
10 15:0.200058543365
10 16:0.228656255392
10 17:0.242016734356
10 18:0.228834142136
10 19:0.169019607326
10 20:0.209148175764
10 21:0.224358333627
10 22:0.17798590257
10 23:0.201693120477
10 24:0.176614993784
10 25:0.179835929912
10 26:0.22290194611
10 27:0.20991833798
10 28:0.164016172167
10 29:0.219563899783
10 30:0.164367289122
10 31:0.222853347738
10 32:0.208050057258
10 33:0.234016688892
10 34:0.149596930216
10 35:0.19217966136
10 36:0.246034794753
10 37:0.22543221899
10 38:0.311937845603
11 12:0.186190037964
11 13:0.13366209656
11 14:0.132570519494
11 15:0.175115840513
11 16:0.109258314976
11 17:0.162578284767
11 18:0.117577546496
11 19:0.154839535056
11 20:0.0928977549661
11 21:0.0751903476156
11 22:0.137092992612
11 23:0.132093684623
11 24:0.152926894787
11 25:0.13918504342
11 26:0.0871375172097
11 27:0.112377607018
11 28:0.174021959946
11 29:0.102329287161
11 30:0.149404414297
11 31:0.144451724489
11 32:0.168770550947
11 33:0.0882311502343
11 34:0.169643171599
11 35:0.131695300682
11 36:0.0962390302975
11 37:0.136971198835
11 38:0.115341554128
12 13:0.12499855929
12 14:0.106383184159
12 15:0.0524056301786
12 16:0.108043422307
12 17:0.149855326157
12 18:0.103102143496
12 19:0.0793766968807
12 20:0.10394510087
12 21:0.134285358759
12 22:0.0712055611055
12 23:0.0753468753358
12 24:0.109998017264
12 25:0.0730457080809
12 26:0.113030504746
12 27:0.114482179133
12 28:0.0937305449788
12 29:0.101450595255
12 30:0.0865607823797
12 31:0.111488204384
12 32:0.100672384208
12 33:0.146650740951
12 34:0.105452803408
12 35:0.0954664904987
12 36:0.125086839178
12 37:0.103101231427
12 38:0.194213361058
13 14:0.0735274254603
13 15:0.120081040942
13 16:0.102907292631
13 17:0.138585610868
13 18:0.0834018605373
13 19:0.129122514184
13 20:0.0719055800013
13 21:0.10295540176
13 22:0.115388921039
13 23:0.095544931595
13 24:0.136796250736
13 25:0.115388050415
13 26:0.0731100229635
13 27:0.0850259154631
13 28:0.0618771527647
13 29:0.0905455889103
13 30:0.0636651067033
13 31:0.0953336252966
13 32:0.103597009665
13 33:0.129632309542
13 34:0.1099143445
13 35:0.0598519555366
13 36:0.10420463743
13 37:0.107024719827
13 38:0.153796283922
14 15:0.0761906496432
14 16:0.0573512693305
14 17:0.0785996217525
14 18:0.0401856930198
14 19:0.118438016969
14 20:0.0739415075015
14 21:0.103937086731
14 22:0.102576117648
14 23:0.0638207069986
14 24:0.13809189374
14 25:0.094915133707
14 26:0.0780490313828
14 27:0.0515520649583
14 28:0.0859547980659
14 29:0.0578822735243
14 30:0.075916623779
14 31:0.0644592037126
14 32:0.12899481305
14 33:0.106351296083
14 34:0.12329039125
14 35:0.05398403601
14 36:0.0608140239259
14 37:0.052424264097
14 38:0.123692300486
15 16:0.0788814820223
15 17:0.10830266859
15 18:0.076895320078
15 19:0.102263213054
15 20:0.101682378386
15 21:0.131610306193
15 22:0.0891365420419
15 23:0.0543944605992
15 24:0.133687575634
15 25:0.0842529261981
15 26:0.104571568398
15 27:0.0917170693601
15 28:0.0965019407027
15 29:0.0797413251204
15 30:0.0858807006646
15 31:0.08093515053
15 32:0.124230662093
15 33:0.135593655254
15 34:0.128263480065
15 35:0.0842616426983
15 36:0.09736009178
15 37:0.066568168229
15 38:0.165550441381
16 17:0.0742043676777
16 18:0.03710500495
16 19:0.101800765737
16 20:0.0596310311193
16 21:0.0751204762791
16 22:0.0837412871046
16 23:0.0430742923726
16 24:0.120407179141
16 25:0.0769248626362
16 26:0.0613767647557
16 27:0.036074033017
16 28:0.110586314458
16 29:0.0218910991331
16 30:0.0857530866926
16 31:0.0576262588484
16 32:0.13480042631
16 33:0.0715247325536
16 34:0.124171497086
16 35:0.0640391186871
16 36:0.0270780115187
16 37:0.0368832837357
16 38:0.105652138779
17 18:0.0824110472681
17 19:0.149624334047
17 20:0.121817687966
17 21:0.133937643588
17 22:0.139085949562
17 23:0.0974488682521
17 24:0.168378846841
17 25:0.126303573695
17 26:0.126270466523
17 27:0.0728303393137
17 28:0.13878011779
17 29:0.0903395675672
17 30:0.123410772929
17 31:0.0815035518573
17 32:0.187829341357
17 33:0.11255733926
17 34:0.159119357072
17 35:0.101541295213
17 36:0.0786319445578
17 37:0.0641666136192
17 38:0.121123058257
18 19:0.104099864519
18 20:0.057037110446
18 21:0.0851020075017
18 22:0.0889790801609
18 23:0.0531882903286
18 24:0.119875864795
18 25:0.0806350837463
18 26:0.0663219136594
18 27:0.04540398683
18 28:0.0961000747372
18 29:0.0426818200568
18 30:0.0829507341375
18 31:0.0496247603947
18 32:0.114070526718
18 33:0.0887414807753
18 34:0.113399683128
18 35:0.0509807395464
18 36:0.0361489020199
18 37:0.0397048327598
18 38:0.100675007049
19 20:0.0794594045784
19 21:0.0904770071629
19 22:0.0271350949491
19 23:0.0914415699183
19 24:0.0378874547629
19 25:0.0274942129789
19 26:0.104287148475
19 27:0.100146791547
19 28:0.119035377043
19 29:0.0946019720523
19 30:0.094144529622
19 31:0.123798963817
19 32:0.109253785755
19 33:0.0975351223391
19 34:0.0636136233094
19 35:0.0916237924817
19 36:0.113340784619
19 37:0.109994732259
19 38:0.173901848403
20 21:0.0434082092315
20 22:0.061663110148
20 23:0.0621139005583
20 24:0.0872728791027
20 25:0.0625472076741
20 26:0.0358804482208
20 27:0.0537731671732
20 28:0.0926340851167
20 29:0.0452247067057
20 30:0.0675425636181
20 31:0.0843625584555
20 32:0.0998365049891
20 33:0.0705593961594
20 34:0.0882811586582
20 35:0.0526015183611
20 36:0.0628269948313
20 37:0.0805490689671
20 38:0.12589696259
21 22:0.0768392704223
21 23:0.0881664477343
21 24:0.087521841878
21 25:0.0784249787244
21 26:0.0541486879265
21 27:0.0692471937741
21 28:0.126533869354
21 29:0.0638176361926
21 30:0.0944680064563
21 31:0.104537068672
21 32:0.124210650902
21 33:0.0469138222504
21 34:0.105151455885
21 35:0.0783611139279
21 36:0.0730041059806
21 37:0.0981826372911
21 38:0.120367430981
22 23:0.0705340916939
22 24:0.0541879627581
22 25:0.0180515423339
22 26:0.0825413710468
22 27:0.0844455076742
22 28:0.107479487663
22 29:0.0737076106136
22 30:0.0805465482911
22 31:0.110284982929
22 32:0.104718572239
22 33:0.0876343873458
22 34:0.0742515391324
22 35:0.0796749890404
22 36:0.0965085142163
22 37:0.0958271861211
22 38:0.164223735893
23 24:0.114802992086
23 25:0.0686898339874
23 26:0.0596041251537
23 27:0.0538286895993
23 28:0.0838592120969
23 29:0.0362133358067
23 30:0.0623661653934
23 31:0.0571738262835
23 32:0.114859935435
23 33:0.0976891476234
23 34:0.112784638013
23 35:0.057610680795
23 36:0.0632122689333
23 37:0.0496683865882
23 38:0.140394803088
24 25:0.0552278253019
24 26:0.114739670173
24 27:0.113983348646
24 28:0.133469699648
24 29:0.11264716731
24 30:0.111129954328
24 31:0.138032844434
24 32:0.108732142066
24 33:0.0980097441519
24 34:0.0563619128575
24 35:0.103341206054
24 36:0.125767749096
24 37:0.129314068218
24 38:0.174812195534
25 26:0.0867225663692
25 27:0.0768938809052
25 28:0.107651029693
25 29:0.0708220217869
25 30:0.0819204858912
25 31:0.103097366648
25 32:0.109013351851
25 33:0.081690096944
25 34:0.070994220366
25 35:0.0744814967329
25 36:0.0889409818224
25 37:0.086156752141
25 38:0.155242970444
26 27:0.0617936267066
26 28:0.0959434896116
26 29:0.042829676883
26 30:0.0687834493589
26 31:0.0822441946119
26 32:0.1094077456
26 33:0.0861013511108
26 34:0.117296346109
26 35:0.0622119478729
26 36:0.0664905795647
26 37:0.0828897695405
26 38:0.128712125999
27 28:0.0935243110648
27 29:0.0345791142525
27 30:0.0691278542405
27 31:0.0596203864549
27 32:0.133495557649
27 33:0.0670634556127
27 34:0.107742641069
27 35:0.0467560058497
27 36:0.0430360780858
27 37:0.0488040502888
27 38:0.115465086217
28 29:0.0993116427397
28 30:0.0457914543266
28 31:0.0910599560879
28 32:0.100687152426
28 33:0.147808936907
28 34:0.0994349545211
28 35:0.0639293175885
28 36:0.121317486583
28 37:0.105297310967
28 38:0.185890241805
29 30:0.071573216677
29 31:0.062433146294
29 32:0.123878553081
29 33:0.0713894567042
29 34:0.116503354769
29 35:0.0557103507287
29 36:0.0378646399644
29 37:0.0482455499188
29 38:0.11696068223
30 31:0.0814443922925
30 32:0.105578595983
30 33:0.116271910618
30 34:0.0908404366085
30 35:0.0441747029949
30 36:0.100435250941
30 37:0.0871950747525
30 38:0.16859626692
31 32:0.12070821577
31 33:0.111132391259
31 34:0.127058988594
31 35:0.05440751501
31 36:0.0622000932451
31 37:0.0384416691491
31 38:0.113637329509
32 33:0.155579050398
32 34:0.100084668131
32 35:0.0966260950511
32 36:0.136142964642
32 37:0.13137747185
32 38:0.177509216071
33 34:0.118004206408
33 35:0.0944001577254
33 36:0.0668811467627
33 37:0.0936007475224
33 38:0.111029017871
34 35:0.0867385350582
34 36:0.130353053768
34 37:0.127174283471
34 38:0.182320944273
35 36:0.0697909401766
35 37:0.0593364499946
35 38:0.13005286682
36 37:0.0446759249848
36 38:0.0836076006358
37 38:0.108586905223
</hsp>