sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OH5-A996-A550
X
>3OH7-A996-A550
X
>3F1F-A1014-A557
X
>1N77-C73-C70
X
>3KNI-A348-A346
X
>3OHJ-A348-A346
X
>3OHK-A348-A346
X
>2J01-A348-A346
X
>3F1H-A355-A353
X
>3OHZ-A348-A346
X
>3R8T-A335-A333
X
>3R8S-A335-A333
X
</seq>
<hsp>
0 1:0.0183477520621
0 2:0.142182386382
0 3:0.952774608052
0 4:0.920512006863
0 5:0.951971506477
0 6:0.954994352884
0 7:0.948723524544
0 8:0.97570630506
0 9:0.956820510266
0 10:0.94458722636
0 11:0.96606093501
1 2:0.148062799412
1 3:0.959608162796
1 4:0.922619632614
1 5:0.956033768813
1 6:0.958655249544
1 7:0.953587029108
1 8:0.980989918069
1 9:0.961625485906
1 10:0.949368846517
1 11:0.970429078118
2 3:0.948551574205
2 4:0.96513333414
2 5:0.981343354009
2 6:0.985881004251
2 7:0.972519686516
2 8:0.998275528034
2 9:0.982289015214
2 10:0.969165747877
2 11:1.0
3 4:0.489081415946
3 5:0.351180359069
3 6:0.355677340938
3 7:0.359937195813
3 8:0.400426181714
3 9:0.376975900885
3 10:0.452432949645
3 11:0.464308036729
4 5:0.22259668684
4 6:0.222399700119
4 7:0.262848519338
4 8:0.240435675101
4 9:0.238361657279
4 10:0.199979822407
4 11:0.25618240875
5 6:0.0181096858173
5 7:0.0781767542966
5 8:0.0858435696953
5 9:0.0702846768036
5 10:0.162536442362
5 11:0.136603414163
6 7:0.080453140539
6 8:0.090180333757
6 9:0.0767385492108
6 10:0.161607061837
6 11:0.139148694133
7 8:0.095748365507
7 9:0.0806024099529
7 10:0.144868339746
7 11:0.134240343754
8 9:0.0504739910763
8 10:0.136443218246
8 11:0.0913146378632
9 10:0.151848692541
9 11:0.0984765857789
10 11:0.167501019243
</hsp>