sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2VQE-A1201-A1199
X
>2VQF-A1201-A1199
X
>2J00-A1201-A1199
X
>2J02-A1201-A1199
X
>3F1E-A1201-A1199
X
>3F1G-A1201-A1199
X
>2UXC-A1201-A1199
X
>1N32-A1201-A1199
X
>1FJG-A1201-A1199
X
</seq>
<hsp>
0 1:0.199000676348
0 2:0.974164961172
0 3:0.999990945629
0 4:0.832056563583
0 5:0.835733975896
0 6:0.637676393369
0 7:0.650922450391
0 8:0.7797195849
1 2:0.919667008429
1 3:0.945917007695
1 4:0.839267548407
1 5:0.844291656755
1 6:0.548151802986
1 7:0.639148731275
1 8:0.751251461236
2 3:0.0459631936377
2 4:0.586886212664
2 5:0.579031311406
2 6:0.86452364946
2 7:0.767273038988
2 8:0.574120716951
3 4:0.612455465285
3 5:0.603768985677
3 6:0.88470643191
3 7:0.785868303279
3 8:0.5945296059
4 5:0.0277339854945
4 6:0.738487566248
4 7:0.552543425466
4 8:0.388078470691
5 6:0.739553257467
5 7:0.552864318584
5 8:0.384386791105
6 7:0.402270857071
6 8:0.478860321228
7 8:0.278199653633
</hsp>