sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHC-A1107-A1106
X
>3OHD-A1107-A1106
X
>3KNH-A1098-A1097
X
>2UUB-A1107-A1106
X
>3OHY-A1107-A1106
X
>3OI0-A1107-A1106
X
>2J02-A1107-A1106
X
>2J00-A1107-A1106
X
</seq>
<hsp>
0 1:0.0122087340938
0 2:0.874428499079
0 3:0.691833780682
0 4:0.100631111948
0 5:0.092933135307
0 6:0.244332436006
0 7:0.251194512539
1 2:0.867042811079
1 3:0.685320421536
1 4:0.110855498202
1 5:0.102834954906
1 6:0.247206274387
1 7:0.253861469019
2 3:0.358479335579
2 4:0.931303302779
2 5:0.925716486965
2 6:0.996533813634
2 7:0.999999064392
3 4:0.748545503601
3 5:0.743317749969
3 6:0.821643422411
3 7:0.826060048695
4 5:0.0103961742894
4 6:0.204249309374
4 7:0.212622643785
5 6:0.203386246258
5 7:0.211689748478
6 7:0.0112085932565
</hsp>