sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3MXH-R41-R76
X
>3MUT-R41-R76
X
>3IRW-R41-R76
X
>3MUR-R41-R76
X
>3MUM-R41-R76
X
>2J03-A2539-A2540
X
>2J01-A2539-A2540
X
</seq>
<hsp>
0 1:0.0330274283272
0 2:0.0286030544188
0 3:0.0239285744147
0 4:0.0335603544595
0 5:0.993011699682
0 6:0.995187137212
1 2:0.0442660132636
1 3:0.0251509597388
1 4:0.0387014357006
1 5:0.993733958208
1 6:0.995948930066
2 3:0.0334887366503
2 4:0.0307717900024
2 5:0.987345218716
2 6:0.989506087656
3 4:0.0385019831346
3 5:0.997828362583
3 6:0.999999706254
4 5:0.984158449718
4 6:0.986352526246
5 6:0.00311271999521
</hsp>