sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2QA4-01315-0889
X
>3CCS-01316-0890
X
>3CCL-01316-0890
X
>3CCM-01316-0890
X
>3CCE-01316-0890
X
>3G71-01316-0890
X
>3CMA-01316-0890
X
>3CPW-01316-0890
X
>3CME-01316-0890
X
>2J03-A1202-A818
X
>2J01-A1202-A818
X
</seq>
<hsp>
0 1:0.363288806137
0 2:0.392369009118
0 3:0.405722868027
0 4:0.492402197283
0 5:0.434845931042
0 6:0.57582459834
0 7:0.469331949609
0 8:0.852655692866
0 9:0.843662807541
0 10:0.835672345486
1 2:0.234029222008
1 3:0.301907429812
1 4:0.262153227588
1 5:0.244510083588
1 6:0.375548489207
1 7:0.288462096207
1 8:0.656888182034
1 9:0.82677452834
1 10:0.83051386432
2 3:0.152106894558
2 4:0.177776735118
2 5:0.208377930741
2 6:0.269550547698
2 7:0.258977206815
2 8:0.509702009147
2 9:0.740898015503
2 10:0.7537793646
3 4:0.282625755729
3 5:0.245793760978
3 6:0.238867300187
3 7:0.251934364661
3 8:0.500485895361
3 9:0.682119143382
3 10:0.691557190075
4 5:0.253805965379
4 6:0.319528024624
4 7:0.276480428726
4 8:0.517388150821
4 9:0.76779363676
4 10:0.784971447287
5 6:0.302594984501
5 7:0.12057294835
5 8:0.580352704912
5 9:0.752542452065
5 10:0.763958431888
6 7:0.301728117296
6 8:0.328445471013
6 9:0.837814116374
6 10:0.850905267351
7 8:0.586845572911
7 9:0.696990355249
7 10:0.706162742318
8 9:0.976965135418
8 10:0.999988753239
9 10:0.0604784622013
</hsp>