sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1Q81-A1082-A1081
X
>1K9M-A1082-A1081
X
>1KD1-A1082-A1081
X
>3CXC-01082-01081
X
>1NJI-A1082-A1081
X
>1VQ5-01082-01081
X
>1Q82-A1082-A1081
X
>1S72-01082-01081
X
>1JJ2-01082-01081
X
</seq>
<hsp>
0 1:0.38353624728
0 2:0.515483409767
0 3:0.797685779268
0 4:0.835822541562
0 5:0.768199373904
0 6:0.476290496047
0 7:1.0
0 8:0.965340915833
1 2:0.345104545469
1 3:0.710648390516
1 4:0.67419224221
1 5:0.663449173747
1 6:0.434289695195
1 7:0.829516215437
1 8:0.798065888355
2 3:0.503566385907
2 4:0.427785951314
2 5:0.4981945747
2 6:0.444412220256
2 7:0.645819252098
2 8:0.616797752645
3 4:0.476314254977
3 5:0.480830115414
3 6:0.760391076819
3 7:0.517641081997
3 8:0.547660928263
4 5:0.268416141818
4 6:0.667969279984
4 7:0.364108870407
4 8:0.302801250513
5 6:0.599325292004
5 7:0.36107578966
5 8:0.293961759445
6 7:0.791715749549
6 8:0.7565354668
7 8:0.108303039432
</hsp>