sequences=13
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5D-4150-12337
X
>3CXC-01981-01979
X
>3F1H-A1988-A1986
X
>3F1F-A1988-A1986
X
>1N8R-A1981-A1979
X
>1YJ9-01981-01979
X
>1Q86-A1981-A1979
X
>1KD1-A1981-A1979
X
>1VQ7-01981-01979
X
>1K9M-A1981-A1979
X
>1Q82-A1981-A1979
X
>1QVG-01981-01979
X
>1K8A-A1981-A1979
X
</seq>
<hsp>
0 1:0.997861299921
0 2:0.956230670988
0 3:0.956261057062
0 4:0.988367873979
0 5:0.999999449408
0 6:0.989970087293
0 7:0.98943328221
0 8:0.978027921383
0 9:0.991434486156
0 10:0.982229178626
0 11:0.993204870738
0 12:0.981876452628
1 2:0.164165267448
1 3:0.162366571538
1 4:0.0311812140138
1 5:0.0316207902872
1 6:0.0375634750194
1 7:0.0546254639337
1 8:0.0633552405835
1 9:0.0453496467704
1 10:0.0552870338672
1 11:0.0491788880932
1 12:0.0446544612742
2 3:0.00918259611532
2 4:0.148291566466
2 5:0.169277461534
2 6:0.174086139611
2 7:0.166972823982
2 8:0.124781968722
2 9:0.173757711202
2 10:0.142879447173
2 11:0.18144330105
2 12:0.161022644988
3 4:0.145621300601
3 5:0.167946309154
3 6:0.172168682861
3 7:0.166337201313
3 8:0.123952919625
3 9:0.172533397712
3 10:0.141836253269
3 11:0.180394523202
3 12:0.159451977266
4 5:0.0358750667226
4 6:0.0343837303739
4 7:0.0526777318238
4 8:0.0461158622357
4 9:0.0431113842678
4 10:0.0397678926546
4 11:0.0502913341564
4 12:0.0336912081723
5 6:0.0289812601222
5 7:0.0371525448131
5 8:0.0548426618944
5 9:0.026341386538
5 10:0.0393650697714
5 11:0.0267665871237
5 12:0.029378331782
6 7:0.0510070708337
6 8:0.0571691437742
6 9:0.0295110011313
6 10:0.0455931363541
6 11:0.0319142463158
6 12:0.031935692966
7 8:0.0568302821879
7 9:0.0244133820671
7 10:0.0397831451522
7 11:0.028786704521
7 12:0.0324527809546
8 9:0.0560500274784
8 10:0.0228012862108
8 11:0.061992746643
8 12:0.0421896615233
9 10:0.0392265086787
9 11:0.0147542100552
9 12:0.0256874975302
10 11:0.0435763103026
10 12:0.0247605050794
11 12:0.0291551789375
</hsp>