sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8O-A97-A62
X
>3R8N-A97-A62
X
>3F1F-A2408-A2375
X
>3F1H-A2408-A2375
X
>3R8T-A2416-A2383
X
>2J03-A2301-A2268
X
>2J01-A2301-A2268
X
</seq>
<hsp>
0 1:0.0958256563973
0 2:0.899339968304
0 3:0.905293686109
0 4:0.944156363842
0 5:0.919153127147
0 6:0.912343231249
1 2:0.946483630293
1 3:0.952026373911
1 4:1.0
1 5:0.968885274093
1 6:0.961858389259
2 3:0.0144549059471
2 4:0.208425674121
2 5:0.10009326611
2 6:0.0993451826008
3 4:0.204129078327
3 5:0.0943715409622
3 6:0.0939319438008
4 5:0.120376758628
4 6:0.124901805911
5 6:0.0115855768463
</hsp>