sequences=17
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2J03-A1931-A1213
X
>3NDB-M102-M70
X
>1FFK-0229-0256
X
>3CCR-02753-02665
X
>1VQK-0230-0257
X
>2VQF-A422-A400
X
>3U5B-2125-2290
X
>3KNK-A713-A732
X
>2J01-A1728-A1739
X
>1YIT-01161-01156
X
>3DIZ-A71-A19
X
>3R8O-A24-A556
X
>3G6E-01161-01156
X
>3F1H-A2742-A2732
X
>3F1F-A2009-A1283
X
>3CCJ-0230-0257
X
>3KNK-A1007-A1108
X
</seq>
<hsp>
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0 2:0.503090372095
0 3:0.247129021
0 4:0.473512492447
0 5:0.732054947483
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15 16:0.747019066123
</hsp>