sequences=15
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8S-A1784-A1821
X
>1QVG-02463-02484
X
>1K8A-A2463-A2484
X
>1VQM-02463-02484
X
>3KNI-A2088-A2040
X
>3KNI-A1512-A1381
X
>1VQ4-01418-01443
X
>3KNK-A2713-A2793
X
>3CPW-01161-01156
X
>3CD6-089-068
X
>1KD1-A1161-A1156
X
>3CCM-01418-01443
X
>1N8R-A89-A68
X
>3CPW-089-068
X
>3CC4-089-068
X
</seq>
<hsp>
0 1:0.421839652865
0 2:0.41030610516
0 3:0.352517641555
0 4:0.595508043782
0 5:0.341471108278
0 6:0.335403138081
0 7:0.959720134914
0 8:0.430440785614
0 9:0.38701771293
0 10:0.407324314222
0 11:0.316201497498
0 12:0.346378737704
0 13:0.340320806248
0 14:0.339513218476
1 2:0.146038674542
1 3:0.157796364761
1 4:0.3202687404
1 5:0.19320904739
1 6:0.327810283108
1 7:0.957276613987
1 8:0.211845900438
1 9:0.48415334641
1 10:0.244278336579
1 11:0.322155902318
1 12:0.508669388414
1 13:0.452352044064
1 14:0.396319191841
2 3:0.120343904848
2 4:0.3639692382
2 5:0.284050357588
2 6:0.39391806087
2 7:0.999996365775
2 8:0.251940619782
2 9:0.479848899256
2 10:0.298877171133
2 11:0.390104317109
2 12:0.495912434306
2 13:0.457199227095
2 14:0.38493861395
3 4:0.369267110515
3 5:0.245825448234
3 6:0.321665185011
3 7:0.931340441937
3 8:0.217277822684
3 9:0.42662207623
3 10:0.245304802543
3 11:0.315478012677
3 12:0.43366387288
3 13:0.393453579801
3 14:0.325229712746
4 5:0.436197128945
4 6:0.501997170407
4 7:0.974447375324
4 8:0.288499154025
4 9:0.661882735271
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4 11:0.494182807255
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4 13:0.605930907972
4 14:0.564650145965
5 6:0.210431958118
5 7:0.866308223876
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5 10:0.241791232614
5 11:0.191718232496
5 12:0.414744851299
5 13:0.360755784983
5 14:0.343335627288
6 7:0.818403686403
6 8:0.260211024919
6 9:0.277764205468
6 10:0.196226325385
6 11:0.0467108744886
6 12:0.292012837988
6 13:0.214918584616
6 14:0.225027282122
7 8:0.880394019069
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7 10:0.836915308955
7 11:0.796145777293
7 12:0.82201346145
7 13:0.829666370995
7 14:0.890596368202
8 9:0.396077536296
8 10:0.0755792824882
8 11:0.265171453401
8 12:0.413240568314
8 13:0.340124378937
8 14:0.292299766026
9 10:0.354579868854
9 11:0.283900627694
9 12:0.0870287740634
9 13:0.115778568519
9 14:0.172590421227
10 11:0.201817058812
10 12:0.371123187874
10 13:0.292344927602
10 14:0.261595849465
11 12:0.296153771685
11 13:0.226854411142
11 14:0.244975480745
12 13:0.0978659245639
12 14:0.165459200301
13 14:0.110543552928
</hsp>