sequences=14
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CC2-02652-02513
X
>3CCQ-02652-02513
X
>3U5D-11658-11674
X
>1N8R-A187-A184
X
>3CCQ-01300-01275
X
>1JJ2-0187-0184
X
>1NJI-A1300-A1275
X
>2J03-A110-A44
X
>1Q86-A187-A184
X
>3OH5-A110-A44
X
>1VQO-01548-01563
X
>1VQ4-01300-01275
X
>3CPW-01300-01275
X
>1XMQ-A236-A271
X
</seq>
<hsp>
0 1:0.333236999405
0 2:0.574872857241
0 3:0.73889452447
0 4:0.537414822256
0 5:0.636740701647
0 6:0.398329804064
0 7:0.505462923494
0 8:0.82734774508
0 9:0.879151689621
0 10:0.865167975726
0 11:0.264129651692
0 12:0.291339262736
0 13:0.892525737777
1 2:0.787407606591
1 3:0.915799771094
1 4:0.513198482327
1 5:0.833463990876
1 6:0.400721196049
1 7:0.531848799379
1 8:1.0
1 9:0.929392091157
1 10:0.970565531107
1 11:0.445410236096
1 12:0.40969342191
1 13:0.844271975938
2 3:0.596152783728
2 4:0.595495485988
2 5:0.499844290812
2 6:0.467368630303
2 7:0.422799679488
2 8:0.451613412329
2 9:0.596940562537
2 10:0.596328560388
2 11:0.476146451532
2 12:0.40962396742
2 13:0.77471832501
3 4:0.759138272358
3 5:0.200426781622
3 6:0.728941338967
3 7:0.692737513973
3 8:0.352593270286
3 9:0.61224220929
3 10:0.43597627063
3 11:0.663269654095
3 12:0.629313101103
3 13:0.717777754791
4 5:0.645554290985
4 6:0.341296722413
4 7:0.272269761941
4 8:0.738071634825
4 9:0.539849511463
4 10:0.650363862916
4 11:0.53571490734
4 12:0.337127244468
4 13:0.585131645298
5 6:0.638894088797
5 7:0.596001543709
5 8:0.345276260672
5 9:0.589993865988
5 10:0.438971821648
5 11:0.563015084774
5 12:0.520575460815
5 13:0.720450736548
6 7:0.179330085232
6 8:0.690478669566
6 9:0.629199549449
6 10:0.679552944042
6 11:0.350980371445
6 12:0.182550562691
6 13:0.591010267495
7 8:0.605889451152
7 9:0.486437001668
7 10:0.568283403861
7 11:0.450526826223
7 12:0.228523716523
7 13:0.511803326319
8 9:0.493781118851
8 10:0.295750459291
8 11:0.69386327674
8 12:0.631793002351
8 13:0.633492970004
9 10:0.370128685013
9 11:0.813893705183
9 12:0.621591486413
9 13:0.441529809686
10 11:0.777178038322
10 12:0.633546051437
10 13:0.440511639992
11 12:0.300410660545
11 13:0.802569949826
12 13:0.647728928909
</hsp>