sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OGY-A252-A222
X
>1VQ9-01573-01501
X
>3F1E-A252-A222
X
>3CCU-01573-01501
X
>3R8S-A607-A259
X
>1XMQ-A252-A222
X
>3CC4-01573-01501
X
>3OHK-A959-A2325
X
>1YJN-0653-0219
X
>3CCU-0653-0219
X
>3CCV-01056-01034
X
>3CMA-01056-01034
X
</seq>
<hsp>
0 1:0.96955814471
0 2:0.521751714911
0 3:0.916528008435
0 4:0.700633042134
0 5:0.544096228358
0 6:0.867256365576
0 7:0.98927994739
0 8:0.960679688118
0 9:0.999992405546
0 10:0.894662879274
0 11:0.866239381221
1 2:0.974581283492
1 3:0.227544940151
1 4:0.522264030885
1 5:0.927313809624
1 6:0.283950643922
1 7:0.796107392076
1 8:0.605624182523
1 9:0.591868902556
1 10:0.502747518399
1 11:0.373641015415
2 3:0.853999092474
2 4:0.717529791646
2 5:0.20020267149
2 6:0.854892734012
2 7:0.676512498598
2 8:0.717142126146
2 9:0.756862711039
2 10:0.841354191084
2 11:0.838072307825
3 4:0.488626925013
3 5:0.818264086012
3 6:0.125636044243
3 7:0.679106048842
3 8:0.454214776506
3 9:0.433880483607
3 10:0.352927642067
3 11:0.293353827584
4 5:0.624963748716
4 6:0.468850485647
4 7:0.575750088561
4 8:0.467372689797
4 9:0.493391964748
4 10:0.466564855066
4 11:0.353760537898
5 6:0.8196681772
5 7:0.568390105818
5 8:0.648526234211
5 9:0.696112220869
5 10:0.770188045945
5 11:0.754689271847
6 7:0.72384462877
6 8:0.49685557691
6 9:0.482810568412
6 10:0.302272474949
6 11:0.273243535626
7 8:0.3698171216
7 9:0.356660654663
7 10:0.662986228135
7 11:0.635745883257
8 9:0.139103659582
8 10:0.405022726354
8 11:0.400854434501
9 10:0.450540200444
9 11:0.445815463498
10 11:0.187844366121
</hsp>